EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000017003 (Gene tree)
Gene ID: 100339709
Gene Symbol: RAB1A
Alias: -
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 34703 bases
Position: chr2:121177308-121212010
Accession: 100339709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000014605	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000016999	RAB1A-201	1080	XM_002709837	ENSOCUP00000014605	205 (aa)	XP_002709883	G1TCS8

Gene Model

Click here to download ENSOCUG00000017003's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000017003's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000017003	RAB1A	85	52.299	ENSOCUG00000014755	RAB11A	81	52.299
ENSOCUG00000017003	RAB1A	57	31.092	ENSOCUG00000005758	ARL4C	61	31.092
ENSOCUG00000017003	RAB1A	95	39.175	ENSOCUG00000008604	RAB31	97	39.175
ENSOCUG00000017003	RAB1A	87	32.609	ENSOCUG00000000650	RERG	90	32.609
ENSOCUG00000017003	RAB1A	77	38.509	ENSOCUG00000023006	RAB34	51	38.509
ENSOCUG00000017003	RAB1A	80	35.928	ENSOCUG00000005929	MRAS	80	35.928
ENSOCUG00000017003	RAB1A	94	44.845	ENSOCUG00000022307	RAB18	93	44.845
ENSOCUG00000017003	RAB1A	80	38.415	ENSOCUG00000022455	-	86	38.415
ENSOCUG00000017003	RAB1A	82	32.544	ENSOCUG00000013173	RHEB	91	32.544
ENSOCUG00000017003	RAB1A	57	31.933	ENSOCUG00000000108	ARL4A	59	31.933
ENSOCUG00000017003	RAB1A	95	43.299	ENSOCUG00000012200	RAB5A	90	43.299
ENSOCUG00000017003	RAB1A	85	56.897	ENSOCUG00000006286	-	98	56.897
ENSOCUG00000017003	RAB1A	96	47.000	ENSOCUG00000000331	RAB2B	93	47.000
ENSOCUG00000017003	RAB1A	76	39.623	ENSOCUG00000014809	RAB9B	79	39.623
ENSOCUG00000017003	RAB1A	84	32.948	ENSOCUG00000004816	RAB23	73	32.948
ENSOCUG00000017003	RAB1A	74	51.974	ENSOCUG00000028208	RAB11B	67	49.102
ENSOCUG00000017003	RAB1A	96	43.069	ENSOCUG00000025381	RAB3D	92	43.069
ENSOCUG00000017003	RAB1A	81	46.386	ENSOCUG00000005634	RAB25	78	46.386
ENSOCUG00000017003	RAB1A	95	43.367	ENSOCUG00000013895	RAB5B	85	43.367
ENSOCUG00000017003	RAB1A	78	39.264	ENSOCUG00000001645	RAB7A	79	39.264
ENSOCUG00000017003	RAB1A	80	37.805	ENSOCUG00000012106	KRAS	67	37.805
ENSOCUG00000017003	RAB1A	86	43.820	ENSOCUG00000004254	RAB39B	84	43.820
ENSOCUG00000017003	RAB1A	94	38.384	ENSOCUG00000009297	RAB6A	94	38.384
ENSOCUG00000017003	RAB1A	94	37.313	ENSOCUG00000009428	RAB6B	94	37.313
ENSOCUG00000017003	RAB1A	81	50.602	ENSOCUG00000007580	RAB30	82	50.602
ENSOCUG00000017003	RAB1A	62	30.370	ENSOCUG00000004788	ARL4D	67	30.370
ENSOCUG00000017003	RAB1A	80	47.024	ENSOCUG00000002932	RAB33A	73	47.024
ENSOCUG00000017003	RAB1A	99	44.554	ENSOCUG00000013654	RAB14	93	44.554

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000017003	RAB1A	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSOCUG00000017003	RAB1A	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSOCUG00000017003	RAB1A	100	100.000	ENSAMEG00000001127	RAB1A	100	100.000	Ailuropoda_melanoleuca
ENSOCUG00000017003	RAB1A	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSOCUG00000017003	RAB1A	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSOCUG00000017003	RAB1A	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSOCUG00000017003	RAB1A	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSOCUG00000017003	RAB1A	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSOCUG00000017003	RAB1A	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSOCUG00000017003	RAB1A	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSOCUG00000017003	RAB1A	100	100.000	ENSCAFG00000003187	RAB1A	100	100.000	Canis_familiaris
ENSOCUG00000017003	RAB1A	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSOCUG00000017003	RAB1A	96	100.000	ENSCHIG00000014060	RAB1A	96	100.000	Capra_hircus
ENSOCUG00000017003	RAB1A	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSOCUG00000017003	RAB1A	100	100.000	ENSCPOG00000015437	RAB1A	100	100.000	Cavia_porcellus
ENSOCUG00000017003	RAB1A	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSOCUG00000017003	RAB1A	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSOCUG00000017003	RAB1A	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSOCUG00000017003	RAB1A	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSOCUG00000017003	RAB1A	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSOCUG00000017003	RAB1A	100	100.000	ENSCGRG00001012691	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSOCUG00000017003	RAB1A	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSOCUG00000017003	RAB1A	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSOCUG00000017003	RAB1A	100	100.000	ENSDORG00000028628	-	100	100.000	Dipodomys_ordii
ENSOCUG00000017003	RAB1A	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSOCUG00000017003	RAB1A	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSOCUG00000017003	RAB1A	100	100.000	ENSEASG00005007298	RAB1A	100	100.000	Equus_asinus_asinus
ENSOCUG00000017003	RAB1A	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSOCUG00000017003	RAB1A	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSOCUG00000017003	RAB1A	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSOCUG00000017003	RAB1A	100	100.000	ENSFCAG00000002536	RAB1A	100	100.000	Felis_catus
ENSOCUG00000017003	RAB1A	99	97.537	ENSFALG00000013624	RAB1A	99	97.537	Ficedula_albicollis
ENSOCUG00000017003	RAB1A	100	100.000	ENSFDAG00000019505	-	100	100.000	Fukomys_damarensis
ENSOCUG00000017003	RAB1A	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSOCUG00000017003	RAB1A	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSOCUG00000017003	RAB1A	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSOCUG00000017003	RAB1A	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSOCUG00000017003	RAB1A	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSOCUG00000017003	RAB1A	100	100.000	ENSHGLG00000013585	RAB1A	100	100.000	Heterocephalus_glaber_female
ENSOCUG00000017003	RAB1A	99	97.549	ENSHGLG00100007994	RAB1A	99	97.549	Heterocephalus_glaber_male
ENSOCUG00000017003	RAB1A	100	100.000	ENSSTOG00000020693	-	100	100.000	Ictidomys_tridecemlineatus
ENSOCUG00000017003	RAB1A	96	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSOCUG00000017003	RAB1A	96	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSOCUG00000017003	RAB1A	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSOCUG00000017003	RAB1A	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSOCUG00000017003	RAB1A	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSOCUG00000017003	RAB1A	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSOCUG00000017003	RAB1A	96	100.000	ENSMMUG00000021721	RAB1A	91	100.000	Macaca_mulatta
ENSOCUG00000017003	RAB1A	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSOCUG00000017003	RAB1A	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSOCUG00000017003	RAB1A	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSOCUG00000017003	RAB1A	96	99.492	ENSMGAG00000004611	RAB1A	98	99.492	Meleagris_gallopavo
ENSOCUG00000017003	RAB1A	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSOCUG00000017003	RAB1A	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSOCUG00000017003	RAB1A	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSOCUG00000017003	RAB1A	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSOCUG00000017003	RAB1A	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSOCUG00000017003	RAB1A	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSOCUG00000017003	RAB1A	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSOCUG00000017003	RAB1A	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSOCUG00000017003	RAB1A	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSOCUG00000017003	RAB1A	100	100.000	ENSMPUG00000006139	RAB1A	82	100.000	Mustela_putorius_furo
ENSOCUG00000017003	RAB1A	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSOCUG00000017003	RAB1A	100	100.000	ENSNGAG00000005838	Rab1a	100	100.000	Nannospalax_galili
ENSOCUG00000017003	RAB1A	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSOCUG00000017003	RAB1A	96	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSOCUG00000017003	RAB1A	94	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSOCUG00000017003	RAB1A	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSOCUG00000017003	RAB1A	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSOCUG00000017003	RAB1A	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSOCUG00000017003	RAB1A	96	100.000	ENSOARG00000019997	RAB1A	97	100.000	Ovis_aries
ENSOCUG00000017003	RAB1A	99	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSOCUG00000017003	RAB1A	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSOCUG00000017003	RAB1A	96	100.000	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSOCUG00000017003	RAB1A	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSOCUG00000017003	RAB1A	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSOCUG00000017003	RAB1A	99	96.552	ENSPSIG00000008028	RAB1A	99	96.552	Pelodiscus_sinensis
ENSOCUG00000017003	RAB1A	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSOCUG00000017003	RAB1A	100	100.000	ENSPEMG00000009340	Rab1a	100	100.000	Peromyscus_maniculatus_bairdii
ENSOCUG00000017003	RAB1A	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSOCUG00000017003	RAB1A	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSOCUG00000017003	RAB1A	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSOCUG00000017003	RAB1A	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSOCUG00000017003	RAB1A	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSOCUG00000017003	RAB1A	100	100.000	ENSPCOG00000017244	RAB1A	100	100.000	Propithecus_coquereli
ENSOCUG00000017003	RAB1A	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSOCUG00000017003	RAB1A	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSOCUG00000017003	RAB1A	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSOCUG00000017003	RAB1A	98	98.010	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSOCUG00000017003	RAB1A	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSOCUG00000017003	RAB1A	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSOCUG00000017003	RAB1A	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSOCUG00000017003	RAB1A	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSOCUG00000017003	RAB1A	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSOCUG00000017003	RAB1A	100	97.073	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSOCUG00000017003	RAB1A	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSOCUG00000017003	RAB1A	96	100.000	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSOCUG00000017003	RAB1A	97	99.495	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSOCUG00000017003	RAB1A	100	100.000	ENSVVUG00000027588	RAB1A	100	100.000	Vulpes_vulpes
ENSOCUG00000017003	RAB1A	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus