EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000017283 (Gene tree)
Gene ID: 100354709
Gene Symbol: SMARCAD1
Alias: -
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 80850 bases
Position: chr15:55656563-55737412
Accession: 100354709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000014856	ResIII	PF04851.15	5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000017291	SMARCAD1-201	5372	XM_008267591	ENSOCUP00000014856	1025 (aa)	XP_008265813	G1TDE1

Gene Model

Click here to download ENSOCUG00000017283's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000017283's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000017283	SMARCAD1	51	37.705	ENSOCUG00000026731	HELLS	64	37.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000017283	SMARCAD1	100	97.076	ENSG00000163104	SMARCAD1	100	98.490	Homo_sapiens
ENSOCUG00000017283	SMARCAD1	69	62.465	ENSAPOG00000011446	smarcad1a	66	62.465	Acanthochromis_polyacanthus
ENSOCUG00000017283	SMARCAD1	100	96.304	ENSAMEG00000005844	SMARCAD1	100	96.304	Ailuropoda_melanoleuca
ENSOCUG00000017283	SMARCAD1	68	68.216	ENSACIG00000018326	smarcad1a	100	68.216	Amphilophus_citrinellus
ENSOCUG00000017283	SMARCAD1	100	62.323	ENSAOCG00000019762	smarcad1a	96	62.323	Amphiprion_ocellaris
ENSOCUG00000017283	SMARCAD1	100	62.465	ENSAPEG00000003889	smarcad1a	96	62.465	Amphiprion_percula
ENSOCUG00000017283	SMARCAD1	82	63.663	ENSATEG00000015608	smarcad1a	91	62.219	Anabas_testudineus
ENSOCUG00000017283	SMARCAD1	94	71.930	ENSAPLG00000004630	SMARCAD1	100	72.652	Anas_platyrhynchos
ENSOCUG00000017283	SMARCAD1	100	70.058	ENSACAG00000013554	SMARCAD1	100	70.708	Anolis_carolinensis
ENSOCUG00000017283	SMARCAD1	100	96.887	ENSANAG00000020488	SMARCAD1	100	96.887	Aotus_nancymaae
ENSOCUG00000017283	SMARCAD1	98	62.216	ENSACLG00000017063	smarcad1a	99	62.216	Astatotilapia_calliptera
ENSOCUG00000017283	SMARCAD1	77	59.186	ENSAMXG00000019130	smarcad1b	85	59.774	Astyanax_mexicanus
ENSOCUG00000017283	SMARCAD1	70	60.391	ENSAMXG00000015470	smarcad1a	99	60.391	Astyanax_mexicanus
ENSOCUG00000017283	SMARCAD1	100	95.530	ENSBTAG00000017061	SMARCAD1	100	95.530	Bos_taurus
ENSOCUG00000017283	SMARCAD1	61	43.036	WBGene00010845	M03C11.8	72	40.414	Caenorhabditis_elegans
ENSOCUG00000017283	SMARCAD1	100	97.268	ENSCJAG00000006778	SMARCAD1	100	97.268	Callithrix_jacchus
ENSOCUG00000017283	SMARCAD1	100	96.012	ENSCAFG00000010026	SMARCAD1	100	96.012	Canis_familiaris
ENSOCUG00000017283	SMARCAD1	87	96.629	ENSCAFG00020003994	SMARCAD1	100	96.629	Canis_lupus_dingo
ENSOCUG00000017283	SMARCAD1	100	96.012	ENSCHIG00000012905	SMARCAD1	100	96.012	Capra_hircus
ENSOCUG00000017283	SMARCAD1	100	96.397	ENSTSYG00000002706	SMARCAD1	100	96.397	Carlito_syrichta
ENSOCUG00000017283	SMARCAD1	90	77.766	ENSCAPG00000016744	SMARCAD1	96	78.425	Cavia_aperea
ENSOCUG00000017283	SMARCAD1	100	94.089	ENSCPOG00000011398	SMARCAD1	100	94.089	Cavia_porcellus
ENSOCUG00000017283	SMARCAD1	100	97.076	ENSCCAG00000022264	SMARCAD1	100	98.490	Cebus_capucinus
ENSOCUG00000017283	SMARCAD1	100	96.979	ENSCATG00000035663	SMARCAD1	100	97.300	Cercocebus_atys
ENSOCUG00000017283	SMARCAD1	82	97.619	ENSCSAG00000004186	SMARCAD1	100	97.619	Chlorocebus_sabaeus
ENSOCUG00000017283	SMARCAD1	100	73.487	ENSCPBG00000013203	SMARCAD1	100	74.159	Chrysemys_picta_bellii
ENSOCUG00000017283	SMARCAD1	64	49.700	ENSCING00000001688	-	99	49.700	Ciona_intestinalis
ENSOCUG00000017283	SMARCAD1	100	96.784	ENSCANG00000003556	SMARCAD1	100	98.490	Colobus_angolensis_palliatus
ENSOCUG00000017283	SMARCAD1	100	93.756	ENSCGRG00001015056	Smarcad1	100	93.756	Cricetulus_griseus_chok1gshd
ENSOCUG00000017283	SMARCAD1	100	93.756	ENSCGRG00000014087	Smarcad1	100	93.756	Cricetulus_griseus_crigri
ENSOCUG00000017283	SMARCAD1	96	60.345	ENSCSEG00000014419	-	89	60.345	Cynoglossus_semilaevis
ENSOCUG00000017283	SMARCAD1	100	62.099	ENSCSEG00000017903	smarcad1a	100	46.520	Cynoglossus_semilaevis
ENSOCUG00000017283	SMARCAD1	90	51.901	ENSDARG00000014041	smarcad1a	92	54.846	Danio_rerio
ENSOCUG00000017283	SMARCAD1	78	57.688	ENSDARG00000073721	smarcad1b	82	58.883	Danio_rerio
ENSOCUG00000017283	SMARCAD1	100	96.004	ENSDNOG00000000806	-	100	96.004	Dasypus_novemcinctus
ENSOCUG00000017283	SMARCAD1	100	92.996	ENSDORG00000012331	Smarcad1	100	92.996	Dipodomys_ordii
ENSOCUG00000017283	SMARCAD1	63	45.692	FBgn0032157	Etl1	90	40.564	Drosophila_melanogaster
ENSOCUG00000017283	SMARCAD1	62	46.012	ENSEBUG00000003969	smarcad1a	96	46.677	Eptatretus_burgeri
ENSOCUG00000017283	SMARCAD1	100	96.206	ENSEASG00005012382	SMARCAD1	100	96.206	Equus_asinus_asinus
ENSOCUG00000017283	SMARCAD1	100	96.206	ENSECAG00000011562	SMARCAD1	100	96.206	Equus_caballus
ENSOCUG00000017283	SMARCAD1	100	51.481	ENSELUG00000018535	smarcad1a	100	51.251	Esox_lucius
ENSOCUG00000017283	SMARCAD1	79	57.074	ENSELUG00000019154	smarcad1b	79	58.951	Esox_lucius
ENSOCUG00000017283	SMARCAD1	100	95.910	ENSFCAG00000003958	SMARCAD1	100	98.322	Felis_catus
ENSOCUG00000017283	SMARCAD1	100	67.375	ENSFALG00000006089	SMARCAD1	100	67.181	Ficedula_albicollis
ENSOCUG00000017283	SMARCAD1	100	95.127	ENSFDAG00000017027	SMARCAD1	100	95.127	Fukomys_damarensis
ENSOCUG00000017283	SMARCAD1	97	64.645	ENSFHEG00000012778	smarcad1a	89	62.343	Fundulus_heteroclitus
ENSOCUG00000017283	SMARCAD1	84	57.373	ENSGMOG00000018995	smarcad1a	97	56.682	Gadus_morhua
ENSOCUG00000017283	SMARCAD1	77	73.451	ENSGALG00000037339	SMARCAD1	94	74.074	Gallus_gallus
ENSOCUG00000017283	SMARCAD1	90	66.509	ENSGAFG00000013498	smarcad1a	60	66.509	Gambusia_affinis
ENSOCUG00000017283	SMARCAD1	85	57.823	ENSGACG00000007327	smarcad1a	99	57.710	Gasterosteus_aculeatus
ENSOCUG00000017283	SMARCAD1	100	73.269	ENSGAGG00000008582	SMARCAD1	100	73.649	Gopherus_agassizii
ENSOCUG00000017283	SMARCAD1	100	97.173	ENSGGOG00000023001	SMARCAD1	100	97.173	Gorilla_gorilla
ENSOCUG00000017283	SMARCAD1	98	62.074	ENSHBUG00000011042	smarcad1a	98	60.660	Haplochromis_burtoni
ENSOCUG00000017283	SMARCAD1	100	95.044	ENSHGLG00000005070	SMARCAD1	100	95.044	Heterocephalus_glaber_female
ENSOCUG00000017283	SMARCAD1	100	95.044	ENSHGLG00100006812	SMARCAD1	100	95.044	Heterocephalus_glaber_male
ENSOCUG00000017283	SMARCAD1	99	63.608	ENSHCOG00000007848	smarcad1a	98	59.167	Hippocampus_comes
ENSOCUG00000017283	SMARCAD1	81	56.287	ENSIPUG00000022817	smarcad1b	89	56.766	Ictalurus_punctatus
ENSOCUG00000017283	SMARCAD1	76	65.102	ENSIPUG00000000242	smarcad1a	95	60.779	Ictalurus_punctatus
ENSOCUG00000017283	SMARCAD1	100	96.592	ENSSTOG00000001227	SMARCAD1	100	96.592	Ictidomys_tridecemlineatus
ENSOCUG00000017283	SMARCAD1	100	95.419	ENSJJAG00000022342	Smarcad1	100	95.419	Jaculus_jaculus
ENSOCUG00000017283	SMARCAD1	64	63.705	ENSKMAG00000021351	smarcad1a	65	60.907	Kryptolebias_marmoratus
ENSOCUG00000017283	SMARCAD1	65	65.522	ENSLBEG00000008088	smarcad1a	63	65.522	Labrus_bergylta
ENSOCUG00000017283	SMARCAD1	100	54.398	ENSLOCG00000012909	smarcad1a	100	55.182	Lepisosteus_oculatus
ENSOCUG00000017283	SMARCAD1	100	93.957	ENSLAFG00000000040	SMARCAD1	100	93.957	Loxodonta_africana
ENSOCUG00000017283	SMARCAD1	100	96.979	ENSMFAG00000042606	SMARCAD1	100	97.188	Macaca_fascicularis
ENSOCUG00000017283	SMARCAD1	87	97.188	ENSMMUG00000022242	SMARCAD1	100	97.188	Macaca_mulatta
ENSOCUG00000017283	SMARCAD1	100	96.881	ENSMNEG00000038117	SMARCAD1	100	98.322	Macaca_nemestrina
ENSOCUG00000017283	SMARCAD1	100	96.881	ENSMLEG00000038333	SMARCAD1	100	98.490	Mandrillus_leucophaeus
ENSOCUG00000017283	SMARCAD1	98	62.674	ENSMAMG00000000933	smarcad1a	96	62.674	Mastacembelus_armatus
ENSOCUG00000017283	SMARCAD1	98	62.216	ENSMZEG00005005203	smarcad1a	99	62.216	Maylandia_zebra
ENSOCUG00000017283	SMARCAD1	94	64.985	ENSMGAG00000005577	SMARCAD1	100	64.985	Meleagris_gallopavo
ENSOCUG00000017283	SMARCAD1	100	93.756	ENSMAUG00000008417	Smarcad1	100	93.756	Mesocricetus_auratus
ENSOCUG00000017283	SMARCAD1	100	95.238	ENSMICG00000009746	SMARCAD1	100	95.238	Microcebus_murinus
ENSOCUG00000017283	SMARCAD1	100	93.171	ENSMOCG00000017142	Smarcad1	100	93.171	Microtus_ochrogaster
ENSOCUG00000017283	SMARCAD1	77	58.491	ENSMMOG00000000275	smarcad1a	94	63.104	Mola_mola
ENSOCUG00000017283	SMARCAD1	100	81.643	ENSMODG00000019268	SMARCAD1	100	81.643	Monodelphis_domestica
ENSOCUG00000017283	SMARCAD1	95	93.388	MGP_CAROLIEiJ_G0028458	-	77	93.388	Mus_caroli
ENSOCUG00000017283	SMARCAD1	100	92.300	ENSMUSG00000029920	Smarcad1	100	92.300	Mus_musculus
ENSOCUG00000017283	SMARCAD1	100	92.885	MGP_PahariEiJ_G0022198	Smarcad1	100	92.885	Mus_pahari
ENSOCUG00000017283	SMARCAD1	100	92.495	MGP_SPRETEiJ_G0029462	Smarcad1	100	92.495	Mus_spretus
ENSOCUG00000017283	SMARCAD1	100	96.498	ENSMPUG00000002111	SMARCAD1	100	96.498	Mustela_putorius_furo
ENSOCUG00000017283	SMARCAD1	100	92.899	ENSMLUG00000000425	SMARCAD1	100	92.899	Myotis_lucifugus
ENSOCUG00000017283	SMARCAD1	100	93.756	ENSNGAG00000000810	Smarcad1	100	93.756	Nannospalax_galili
ENSOCUG00000017283	SMARCAD1	66	62.979	ENSNBRG00000012749	smarcad1a	82	61.891	Neolamprologus_brichardi
ENSOCUG00000017283	SMARCAD1	100	97.173	ENSNLEG00000014225	SMARCAD1	100	98.490	Nomascus_leucogenys
ENSOCUG00000017283	SMARCAD1	100	94.072	ENSODEG00000004334	SMARCAD1	100	94.072	Octodon_degus
ENSOCUG00000017283	SMARCAD1	63	65.741	ENSONIG00000015059	smarcad1a	100	52.077	Oreochromis_niloticus
ENSOCUG00000017283	SMARCAD1	80	84.300	ENSOANG00000013764	SMARCAD1	100	84.300	Ornithorhynchus_anatinus
ENSOCUG00000017283	SMARCAD1	65	65.211	ENSORLG00000004869	smarcad1a	69	61.317	Oryzias_latipes
ENSOCUG00000017283	SMARCAD1	65	65.211	ENSORLG00020020569	smarcad1a	69	61.180	Oryzias_latipes_hni
ENSOCUG00000017283	SMARCAD1	65	65.060	ENSORLG00015009045	smarcad1a	69	61.317	Oryzias_latipes_hsok
ENSOCUG00000017283	SMARCAD1	65	64.962	ENSOMEG00000023032	smarcad1a	69	61.507	Oryzias_melastigma
ENSOCUG00000017283	SMARCAD1	100	94.947	ENSOGAG00000011444	SMARCAD1	100	94.947	Otolemur_garnettii
ENSOCUG00000017283	SMARCAD1	100	95.914	ENSOARG00000017851	SMARCAD1	100	95.914	Ovis_aries
ENSOCUG00000017283	SMARCAD1	100	97.271	ENSPPAG00000035715	SMARCAD1	100	97.271	Pan_paniscus
ENSOCUG00000017283	SMARCAD1	100	96.008	ENSPPRG00000024756	SMARCAD1	100	98.322	Panthera_pardus
ENSOCUG00000017283	SMARCAD1	100	95.821	ENSPTIG00000017868	SMARCAD1	100	95.821	Panthera_tigris_altaica
ENSOCUG00000017283	SMARCAD1	100	97.173	ENSPTRG00000023126	SMARCAD1	100	98.490	Pan_troglodytes
ENSOCUG00000017283	SMARCAD1	100	95.724	ENSPANG00000019757	SMARCAD1	100	95.724	Papio_anubis
ENSOCUG00000017283	SMARCAD1	100	73.058	ENSPSIG00000010255	SMARCAD1	100	73.154	Pelodiscus_sinensis
ENSOCUG00000017283	SMARCAD1	63	63.919	ENSPMGG00000010735	smarcad1a	96	61.953	Periophthalmus_magnuspinnatus
ENSOCUG00000017283	SMARCAD1	100	78.927	ENSPEMG00000001854	Smarcad1	100	79.220	Peromyscus_maniculatus_bairdii
ENSOCUG00000017283	SMARCAD1	84	51.751	ENSPMAG00000003516	smarcad1a	99	47.483	Petromyzon_marinus
ENSOCUG00000017283	SMARCAD1	77	87.484	ENSPCIG00000008137	SMARCAD1	98	88.874	Phascolarctos_cinereus
ENSOCUG00000017283	SMARCAD1	63	66.459	ENSPFOG00000019116	smarcad1a	64	61.818	Poecilia_formosa
ENSOCUG00000017283	SMARCAD1	63	66.303	ENSPLAG00000000108	smarcad1a	64	61.678	Poecilia_latipinna
ENSOCUG00000017283	SMARCAD1	63	66.459	ENSPMEG00000009155	smarcad1a	64	61.818	Poecilia_mexicana
ENSOCUG00000017283	SMARCAD1	95	66.927	ENSPREG00000018185	smarcad1a	94	62.170	Poecilia_reticulata
ENSOCUG00000017283	SMARCAD1	100	96.689	ENSPPYG00000014935	SMARCAD1	100	96.689	Pongo_abelii
ENSOCUG00000017283	SMARCAD1	73	95.610	ENSPCOG00000020478	SMARCAD1	89	95.610	Propithecus_coquereli
ENSOCUG00000017283	SMARCAD1	100	94.461	ENSPVAG00000001760	SMARCAD1	100	94.461	Pteropus_vampyrus
ENSOCUG00000017283	SMARCAD1	67	61.863	ENSPNYG00000010087	smarcad1a	82	61.863	Pundamilia_nyererei
ENSOCUG00000017283	SMARCAD1	78	58.744	ENSPNAG00000010099	smarcad1b	84	59.824	Pygocentrus_nattereri
ENSOCUG00000017283	SMARCAD1	100	49.953	ENSPNAG00000001663	smarcad1a	100	49.164	Pygocentrus_nattereri
ENSOCUG00000017283	SMARCAD1	100	93.372	ENSRNOG00000006391	Smarcad1	100	93.372	Rattus_norvegicus
ENSOCUG00000017283	SMARCAD1	100	96.784	ENSRBIG00000041989	SMARCAD1	100	96.784	Rhinopithecus_bieti
ENSOCUG00000017283	SMARCAD1	100	96.784	ENSRROG00000035309	SMARCAD1	100	96.784	Rhinopithecus_roxellana
ENSOCUG00000017283	SMARCAD1	100	97.076	ENSSBOG00000032114	SMARCAD1	100	98.490	Saimiri_boliviensis_boliviensis
ENSOCUG00000017283	SMARCAD1	100	82.415	ENSSHAG00000001279	SMARCAD1	100	82.512	Sarcophilus_harrisii
ENSOCUG00000017283	SMARCAD1	100	50.417	ENSSFOG00015016814	smarcad1b	100	50.884	Scleropages_formosus
ENSOCUG00000017283	SMARCAD1	75	57.254	ENSSFOG00015020909	smarcad1a	100	57.180	Scleropages_formosus
ENSOCUG00000017283	SMARCAD1	97	64.470	ENSSMAG00000001326	smarcad1a	95	64.470	Scophthalmus_maximus
ENSOCUG00000017283	SMARCAD1	68	63.271	ENSSDUG00000022338	smarcad1a	84	62.045	Seriola_dumerili
ENSOCUG00000017283	SMARCAD1	68	62.984	ENSSLDG00000024986	smarcad1a	66	61.765	Seriola_lalandi_dorsalis
ENSOCUG00000017283	SMARCAD1	58	84.925	ENSSPUG00000004633	SMARCAD1	100	84.925	Sphenodon_punctatus
ENSOCUG00000017283	SMARCAD1	68	63.075	ENSSPAG00000001970	smarcad1a	65	63.181	Stegastes_partitus
ENSOCUG00000017283	SMARCAD1	100	96.012	ENSSSCG00000009193	SMARCAD1	100	97.027	Sus_scrofa
ENSOCUG00000017283	SMARCAD1	76	77.806	ENSTGUG00000003127	SMARCAD1	100	78.061	Taeniopygia_guttata
ENSOCUG00000017283	SMARCAD1	84	56.995	ENSTNIG00000017585	smarcad1a	99	57.323	Tetraodon_nigroviridis
ENSOCUG00000017283	SMARCAD1	91	97.421	ENSTBEG00000002789	SMARCAD1	91	97.421	Tupaia_belangeri
ENSOCUG00000017283	SMARCAD1	98	94.737	ENSTTRG00000000226	SMARCAD1	100	94.737	Tursiops_truncatus
ENSOCUG00000017283	SMARCAD1	100	96.012	ENSUAMG00000022262	SMARCAD1	99	97.015	Ursus_americanus
ENSOCUG00000017283	SMARCAD1	100	96.300	ENSUMAG00000004549	SMARCAD1	100	96.300	Ursus_maritimus
ENSOCUG00000017283	SMARCAD1	100	96.012	ENSVVUG00000007271	SMARCAD1	100	97.146	Vulpes_vulpes
ENSOCUG00000017283	SMARCAD1	84	65.643	ENSXETG00000019214	smarcad1	100	65.529	Xenopus_tropicalis
ENSOCUG00000017283	SMARCAD1	76	59.021	ENSXCOG00000005232	smarcad1a	84	62.372	Xiphophorus_couchianus
ENSOCUG00000017283	SMARCAD1	99	63.120	ENSXMAG00000015350	smarcad1a	89	61.538	Xiphophorus_maculatus