EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000017366 (Gene tree)
Gene ID: 100352073
Gene Symbol: R3HDM1
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 228022 bases
Position: chr7:72797849-73025870
Accession: 100352073
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000017258	R3H	PF01424.22	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000029720	R3HDM1-201	3763	XM_002712427	ENSOCUP00000017258	1004 (aa)	XP_002712473	G1TJX8

Gene Model

Click here to download ENSOCUG00000017366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000017366's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000017366	R3HDM1	73	48.645	ENSOCUG00000009828	ARPP21	53	60.220

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000017366	R3HDM1	98	94.004	ENSG00000048991	R3HDM1	99	91.246	Homo_sapiens
ENSOCUG00000017366	R3HDM1	98	48.018	ENSAPOG00000020850	r3hdm1	97	47.173	Acanthochromis_polyacanthus
ENSOCUG00000017366	R3HDM1	98	94.004	ENSAMEG00000014886	R3HDM1	89	94.004	Ailuropoda_melanoleuca
ENSOCUG00000017366	R3HDM1	97	47.217	ENSAOCG00000005192	r3hdm1	99	46.512	Amphiprion_ocellaris
ENSOCUG00000017366	R3HDM1	97	46.923	ENSAPEG00000016108	r3hdm1	99	46.570	Amphiprion_percula
ENSOCUG00000017366	R3HDM1	97	45.785	ENSATEG00000000232	r3hdm1	99	46.079	Anabas_testudineus
ENSOCUG00000017366	R3HDM1	98	78.296	ENSAPLG00000015231	R3HDM1	89	78.499	Anas_platyrhynchos
ENSOCUG00000017366	R3HDM1	98	75.220	ENSACAG00000001676	R3HDM1	89	76.298	Anolis_carolinensis
ENSOCUG00000017366	R3HDM1	98	93.807	ENSANAG00000035334	R3HDM1	89	93.807	Aotus_nancymaae
ENSOCUG00000017366	R3HDM1	88	49.786	ENSACLG00000027282	r3hdm1	94	50.000	Astatotilapia_calliptera
ENSOCUG00000017366	R3HDM1	90	71.223	ENSAMXG00000012861	R3HDM1	89	71.154	Astyanax_mexicanus
ENSOCUG00000017366	R3HDM1	98	55.534	ENSAMXG00000003536	r3hdm1	89	61.663	Astyanax_mexicanus
ENSOCUG00000017366	R3HDM1	98	89.293	ENSBTAG00000013302	R3HDM1	89	89.784	Bos_taurus
ENSOCUG00000017366	R3HDM1	98	93.801	ENSCJAG00000011718	R3HDM1	89	93.801	Callithrix_jacchus
ENSOCUG00000017366	R3HDM1	98	94.309	ENSCAFG00000005075	R3HDM1	89	94.309	Canis_familiaris
ENSOCUG00000017366	R3HDM1	98	94.405	ENSCAFG00020016119	R3HDM1	99	92.818	Canis_lupus_dingo
ENSOCUG00000017366	R3HDM1	98	92.581	ENSCHIG00000020851	R3HDM1	89	92.683	Capra_hircus
ENSOCUG00000017366	R3HDM1	98	88.322	ENSCPOG00000012784	R3HDM1	95	93.348	Cavia_porcellus
ENSOCUG00000017366	R3HDM1	98	93.591	ENSCCAG00000027199	R3HDM1	89	93.388	Cebus_capucinus
ENSOCUG00000017366	R3HDM1	98	96.311	ENSCATG00000023642	R3HDM1	89	92.988	Cercocebus_atys
ENSOCUG00000017366	R3HDM1	98	88.998	ENSCLAG00000007962	R3HDM1	100	90.698	Chinchilla_lanigera
ENSOCUG00000017366	R3HDM1	98	89.086	ENSCSAG00000016356	R3HDM1	90	89.882	Chlorocebus_sabaeus
ENSOCUG00000017366	R3HDM1	84	79.672	ENSCHOG00000013638	R3HDM1	79	79.672	Choloepus_hoffmanni
ENSOCUG00000017366	R3HDM1	84	79.529	ENSCPBG00000009645	R3HDM1	86	90.037	Chrysemys_picta_bellii
ENSOCUG00000017366	R3HDM1	98	93.198	ENSCANG00000034748	R3HDM1	89	92.792	Colobus_angolensis_palliatus
ENSOCUG00000017366	R3HDM1	98	88.016	ENSCGRG00001012357	R3hdm1	87	88.016	Cricetulus_griseus_chok1gshd
ENSOCUG00000017366	R3HDM1	98	90.854	ENSCGRG00000012080	R3hdm1	100	90.365	Cricetulus_griseus_crigri
ENSOCUG00000017366	R3HDM1	97	42.521	ENSCSEG00000008944	r3hdm1	86	58.612	Cynoglossus_semilaevis
ENSOCUG00000017366	R3HDM1	97	48.350	ENSCVAG00000007582	r3hdm1	99	47.614	Cyprinodon_variegatus
ENSOCUG00000017366	R3HDM1	98	89.192	ENSDNOG00000000771	R3HDM1	89	89.394	Dasypus_novemcinctus
ENSOCUG00000017366	R3HDM1	98	81.504	ENSETEG00000013606	R3HDM1	89	82.317	Echinops_telfairi
ENSOCUG00000017366	R3HDM1	68	42.061	ENSEBUG00000014746	arpp21	97	42.508	Eptatretus_burgeri
ENSOCUG00000017366	R3HDM1	98	93.591	ENSEASG00005007392	R3HDM1	89	93.591	Equus_asinus_asinus
ENSOCUG00000017366	R3HDM1	98	93.896	ENSECAG00000019114	R3HDM1	89	93.896	Equus_caballus
ENSOCUG00000017366	R3HDM1	88	85.793	ENSEEUG00000012589	R3HDM1	80	85.055	Erinaceus_europaeus
ENSOCUG00000017366	R3HDM1	97	56.917	ENSELUG00000004909	R3HDM1	92	56.865	Esox_lucius
ENSOCUG00000017366	R3HDM1	90	50.564	ENSELUG00000014413	r3hdm1	87	52.000	Esox_lucius
ENSOCUG00000017366	R3HDM1	98	93.788	ENSFCAG00000027113	R3HDM1	89	93.992	Felis_catus
ENSOCUG00000017366	R3HDM1	82	72.378	ENSFALG00000013731	R3HDM1	72	72.494	Ficedula_albicollis
ENSOCUG00000017366	R3HDM1	98	88.518	ENSFDAG00000016478	R3HDM1	99	94.649	Fukomys_damarensis
ENSOCUG00000017366	R3HDM1	97	45.918	ENSFHEG00000018713	r3hdm1	100	47.174	Fundulus_heteroclitus
ENSOCUG00000017366	R3HDM1	62	63.261	ENSGMOG00000006042	-	73	63.261	Gadus_morhua
ENSOCUG00000017366	R3HDM1	98	52.212	ENSGALG00000012246	R3HDM1	86	84.918	Gallus_gallus
ENSOCUG00000017366	R3HDM1	86	50.108	ENSGAFG00000006203	r3hdm1	94	49.620	Gambusia_affinis
ENSOCUG00000017366	R3HDM1	91	48.090	ENSGACG00000014925	r3hdm1	95	47.908	Gasterosteus_aculeatus
ENSOCUG00000017366	R3HDM1	98	77.665	ENSGAGG00000007840	R3HDM1	84	82.456	Gopherus_agassizii
ENSOCUG00000017366	R3HDM1	98	93.699	ENSGGOG00000008156	R3HDM1	100	92.356	Gorilla_gorilla
ENSOCUG00000017366	R3HDM1	50	58.397	ENSHBUG00000015737	R3HDM1	90	57.634	Haplochromis_burtoni
ENSOCUG00000017366	R3HDM1	98	88.791	ENSHGLG00000015718	R3HDM1	99	94.834	Heterocephalus_glaber_female
ENSOCUG00000017366	R3HDM1	98	88.496	ENSHGLG00100003184	-	100	89.701	Heterocephalus_glaber_male
ENSOCUG00000017366	R3HDM1	97	71.575	ENSHGLG00100015374	-	91	71.575	Heterocephalus_glaber_male
ENSOCUG00000017366	R3HDM1	87	44.035	ENSHCOG00000013366	r3hdm1	88	59.500	Hippocampus_comes
ENSOCUG00000017366	R3HDM1	82	66.066	ENSIPUG00000013629	r3hdm1	84	67.601	Ictalurus_punctatus
ENSOCUG00000017366	R3HDM1	89	65.155	ENSIPUG00000001676	R3HDM1	99	65.000	Ictalurus_punctatus
ENSOCUG00000017366	R3HDM1	98	94.512	ENSSTOG00000007572	R3HDM1	99	97.048	Ictidomys_tridecemlineatus
ENSOCUG00000017366	R3HDM1	92	70.336	ENSLACG00000005334	R3HDM1	89	70.306	Latimeria_chalumnae
ENSOCUG00000017366	R3HDM1	98	66.932	ENSLOCG00000001641	r3hdm1	90	66.301	Lepisosteus_oculatus
ENSOCUG00000017366	R3HDM1	98	90.265	ENSLAFG00000009065	R3HDM1	90	90.265	Loxodonta_africana
ENSOCUG00000017366	R3HDM1	98	93.598	ENSMFAG00000030331	R3HDM1	88	96.059	Macaca_fascicularis
ENSOCUG00000017366	R3HDM1	98	93.388	ENSMMUG00000009844	R3HDM1	89	93.184	Macaca_mulatta
ENSOCUG00000017366	R3HDM1	98	93.394	ENSMNEG00000027793	R3HDM1	88	96.059	Macaca_nemestrina
ENSOCUG00000017366	R3HDM1	98	93.699	ENSMLEG00000043189	R3HDM1	89	93.293	Mandrillus_leucophaeus
ENSOCUG00000017366	R3HDM1	97	48.851	ENSMAMG00000004532	r3hdm1	92	58.621	Mastacembelus_armatus
ENSOCUG00000017366	R3HDM1	97	48.887	ENSMZEG00005003157	r3hdm1	92	57.854	Maylandia_zebra
ENSOCUG00000017366	R3HDM1	98	77.925	ENSMGAG00000012461	R3HDM1	89	77.925	Meleagris_gallopavo
ENSOCUG00000017366	R3HDM1	98	87.463	ENSMAUG00000010315	R3hdm1	100	90.698	Mesocricetus_auratus
ENSOCUG00000017366	R3HDM1	98	67.988	ENSMICG00000042655	-	93	88.462	Microcebus_murinus
ENSOCUG00000017366	R3HDM1	98	93.198	ENSMICG00000005900	-	89	93.198	Microcebus_murinus
ENSOCUG00000017366	R3HDM1	54	94.096	ENSMOCG00000019833	-	99	94.096	Microtus_ochrogaster
ENSOCUG00000017366	R3HDM1	98	77.533	ENSMODG00000000923	R3HDM1	96	77.533	Monodelphis_domestica
ENSOCUG00000017366	R3HDM1	98	47.674	ENSMALG00000009000	r3hdm1	90	47.527	Monopterus_albus
ENSOCUG00000017366	R3HDM1	98	86.824	MGP_CAROLIEiJ_G0014543	R3hdm1	99	93.727	Mus_caroli
ENSOCUG00000017366	R3HDM1	98	86.922	ENSMUSG00000056211	R3hdm1	99	93.727	Mus_musculus
ENSOCUG00000017366	R3HDM1	98	86.726	MGP_PahariEiJ_G0027779	R3hdm1	99	93.173	Mus_pahari
ENSOCUG00000017366	R3HDM1	98	87.119	MGP_SPRETEiJ_G0015350	R3hdm1	99	93.911	Mus_spretus
ENSOCUG00000017366	R3HDM1	98	93.801	ENSMPUG00000002412	R3HDM1	89	93.902	Mustela_putorius_furo
ENSOCUG00000017366	R3HDM1	98	91.996	ENSMLUG00000013824	R3HDM1	89	91.996	Myotis_lucifugus
ENSOCUG00000017366	R3HDM1	98	93.902	ENSNLEG00000008622	R3HDM1	89	93.496	Nomascus_leucogenys
ENSOCUG00000017366	R3HDM1	98	72.301	ENSMEUG00000011784	R3HDM1	100	72.301	Notamacropus_eugenii
ENSOCUG00000017366	R3HDM1	98	88.299	ENSODEG00000008607	R3HDM1	100	91.694	Octodon_degus
ENSOCUG00000017366	R3HDM1	92	50.711	ENSONIG00000012017	r3hdm1	90	49.847	Oreochromis_niloticus
ENSOCUG00000017366	R3HDM1	98	79.798	ENSOANG00000007987	R3HDM1	89	80.000	Ornithorhynchus_anatinus
ENSOCUG00000017366	R3HDM1	97	43.961	ENSORLG00000004297	r3hdm1	94	47.541	Oryzias_latipes
ENSOCUG00000017366	R3HDM1	97	46.221	ENSORLG00015017355	r3hdm1	99	46.634	Oryzias_latipes_hsok
ENSOCUG00000017366	R3HDM1	50	57.744	ENSOMEG00000003882	-	94	57.744	Oryzias_melastigma
ENSOCUG00000017366	R3HDM1	98	92.276	ENSOGAG00000003136	R3HDM1	89	92.175	Otolemur_garnettii
ENSOCUG00000017366	R3HDM1	98	92.276	ENSOARG00000010788	R3HDM1	89	92.378	Ovis_aries
ENSOCUG00000017366	R3HDM1	98	93.813	ENSPPAG00000027858	R3HDM1	89	93.813	Pan_paniscus
ENSOCUG00000017366	R3HDM1	98	93.686	ENSPPRG00000002626	R3HDM1	89	93.890	Panthera_pardus
ENSOCUG00000017366	R3HDM1	98	93.686	ENSPTIG00000016581	R3HDM1	89	93.890	Panthera_tigris_altaica
ENSOCUG00000017366	R3HDM1	98	93.604	ENSPTRG00000012494	R3HDM1	89	93.401	Pan_troglodytes
ENSOCUG00000017366	R3HDM1	98	93.598	ENSPANG00000026448	R3HDM1	89	93.191	Papio_anubis
ENSOCUG00000017366	R3HDM1	89	66.173	ENSPKIG00000004328	r3hdm1	79	75.399	Paramormyrops_kingsleyae
ENSOCUG00000017366	R3HDM1	98	77.688	ENSPSIG00000012915	R3HDM1	89	77.688	Pelodiscus_sinensis
ENSOCUG00000017366	R3HDM1	98	87.414	ENSPEMG00000015187	R3hdm1	100	90.365	Peromyscus_maniculatus_bairdii
ENSOCUG00000017366	R3HDM1	92	44.244	ENSPMAG00000003369	-	94	43.686	Petromyzon_marinus
ENSOCUG00000017366	R3HDM1	98	83.249	ENSPCIG00000002491	R3HDM1	89	83.249	Phascolarctos_cinereus
ENSOCUG00000017366	R3HDM1	97	46.791	ENSPFOG00000015036	r3hdm1	99	46.168	Poecilia_formosa
ENSOCUG00000017366	R3HDM1	88	49.309	ENSPLAG00000018042	r3hdm1	95	49.678	Poecilia_latipinna
ENSOCUG00000017366	R3HDM1	88	49.574	ENSPMEG00000023947	r3hdm1	95	49.411	Poecilia_mexicana
ENSOCUG00000017366	R3HDM1	97	48.844	ENSPREG00000007902	r3hdm1	88	62.053	Poecilia_reticulata
ENSOCUG00000017366	R3HDM1	98	92.785	ENSPPYG00000012815	R3HDM1	89	92.785	Pongo_abelii
ENSOCUG00000017366	R3HDM1	98	79.552	ENSPCAG00000006208	R3HDM1	89	79.451	Procavia_capensis
ENSOCUG00000017366	R3HDM1	98	90.844	ENSPCOG00000012698	R3HDM1	89	90.844	Propithecus_coquereli
ENSOCUG00000017366	R3HDM1	98	83.350	ENSPVAG00000006098	R3HDM1	89	83.046	Pteropus_vampyrus
ENSOCUG00000017366	R3HDM1	79	75.641	ENSPNAG00000005436	R3HDM1	88	75.563	Pygocentrus_nattereri
ENSOCUG00000017366	R3HDM1	73	38.005	ENSPNAG00000004162	arpp21	68	41.966	Pygocentrus_nattereri
ENSOCUG00000017366	R3HDM1	95	56.526	ENSPNAG00000013952	r3hdm1	89	62.471	Pygocentrus_nattereri
ENSOCUG00000017366	R3HDM1	98	86.529	ENSRNOG00000004099	R3hdm1	89	86.529	Rattus_norvegicus
ENSOCUG00000017366	R3HDM1	98	91.574	ENSRBIG00000033317	R3HDM1	87	97.786	Rhinopithecus_bieti
ENSOCUG00000017366	R3HDM1	98	93.089	ENSRROG00000034534	R3HDM1	89	92.886	Rhinopithecus_roxellana
ENSOCUG00000017366	R3HDM1	98	93.293	ENSSBOG00000020389	R3HDM1	89	93.293	Saimiri_boliviensis_boliviensis
ENSOCUG00000017366	R3HDM1	98	83.570	ENSSHAG00000016999	R3HDM1	89	83.570	Sarcophilus_harrisii
ENSOCUG00000017366	R3HDM1	98	58.209	ENSSFOG00015019851	-	95	57.561	Scleropages_formosus
ENSOCUG00000017366	R3HDM1	90	70.218	ENSSFOG00015014134	r3hdm1	89	62.124	Scleropages_formosus
ENSOCUG00000017366	R3HDM1	98	46.591	ENSSMAG00000001669	r3hdm1	91	46.242	Scophthalmus_maximus
ENSOCUG00000017366	R3HDM1	97	47.954	ENSSDUG00000010749	r3hdm1	99	48.088	Seriola_dumerili
ENSOCUG00000017366	R3HDM1	98	48.855	ENSSLDG00000004499	r3hdm1	90	48.851	Seriola_lalandi_dorsalis
ENSOCUG00000017366	R3HDM1	58	86.170	ENSSARG00000000352	-	53	86.170	Sorex_araneus
ENSOCUG00000017366	R3HDM1	98	79.167	ENSSPUG00000004167	R3HDM1	89	79.065	Sphenodon_punctatus
ENSOCUG00000017366	R3HDM1	97	49.713	ENSSPAG00000004648	r3hdm1	99	50.198	Stegastes_partitus
ENSOCUG00000017366	R3HDM1	98	93.801	ENSSSCG00000015692	R3HDM1	89	93.902	Sus_scrofa
ENSOCUG00000017366	R3HDM1	98	73.428	ENSTGUG00000011750	R3HDM1	89	73.529	Taeniopygia_guttata
ENSOCUG00000017366	R3HDM1	86	47.261	ENSTRUG00000011654	r3hdm1	93	47.091	Takifugu_rubripes
ENSOCUG00000017366	R3HDM1	95	46.324	ENSTNIG00000010362	r3hdm1	95	46.463	Tetraodon_nigroviridis
ENSOCUG00000017366	R3HDM1	98	85.961	ENSTTRG00000003935	R3HDM1	89	86.165	Tursiops_truncatus
ENSOCUG00000017366	R3HDM1	77	94.459	ENSUAMG00000024806	R3HDM1	99	94.280	Ursus_americanus
ENSOCUG00000017366	R3HDM1	98	89.115	ENSUMAG00000005552	R3HDM1	89	89.115	Ursus_maritimus
ENSOCUG00000017366	R3HDM1	87	91.228	ENSVPAG00000007333	R3HDM1	79	91.228	Vicugna_pacos
ENSOCUG00000017366	R3HDM1	98	91.052	ENSVVUG00000006457	R3HDM1	90	91.052	Vulpes_vulpes
ENSOCUG00000017366	R3HDM1	98	67.308	ENSXETG00000019330	r3hdm1	99	67.105	Xenopus_tropicalis
ENSOCUG00000017366	R3HDM1	74	50.769	ENSXCOG00000017448	r3hdm1	94	50.514	Xiphophorus_couchianus
ENSOCUG00000017366	R3HDM1	97	46.828	ENSXMAG00000007885	r3hdm1	99	46.032	Xiphophorus_maculatus