EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000017400 (Gene tree)
Gene ID: 100339220
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 32711 bases
Position: chr3:113900042-113932752
Accession: 100339220
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000014954	POP1	PF06978.11	4.4e-37	1	2
ENSOCUP00000014954	POP1	PF06978.11	4.4e-37	2	2
ENSOCUP00000014954	POPLD	PF08170.12	2.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000017402	POP1-201	3090	XM_008255786	ENSOCUP00000014954	1029 (aa)	XP_008254008	G1TDM2

Gene Model

Click here to download ENSOCUG00000017400's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03008	Ribosome biogenesis in eukaryotes	KEGG
ocu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000017400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000017400	POP1	100	82.216	ENSG00000104356	POP1	100	85.561	Homo_sapiens
ENSOCUG00000017400	POP1	100	47.516	ENSAPOG00000008198	pop1	100	47.324	Acanthochromis_polyacanthus
ENSOCUG00000017400	POP1	100	77.519	ENSAMEG00000000556	POP1	100	77.519	Ailuropoda_melanoleuca
ENSOCUG00000017400	POP1	90	48.732	ENSACIG00000004169	POP1	100	46.154	Amphilophus_citrinellus
ENSOCUG00000017400	POP1	100	46.355	ENSAOCG00000010991	pop1	100	46.341	Amphiprion_ocellaris
ENSOCUG00000017400	POP1	91	46.289	ENSAPEG00000007607	pop1	96	46.528	Amphiprion_percula
ENSOCUG00000017400	POP1	100	45.421	ENSATEG00000024814	POP1	100	45.959	Anabas_testudineus
ENSOCUG00000017400	POP1	92	61.216	ENSAPLG00000014418	POP1	99	61.006	Anas_platyrhynchos
ENSOCUG00000017400	POP1	100	54.894	ENSACAG00000016083	POP1	100	54.990	Anolis_carolinensis
ENSOCUG00000017400	POP1	89	84.751	ENSANAG00000026360	POP1	99	84.751	Aotus_nancymaae
ENSOCUG00000017400	POP1	92	52.103	ENSACLG00000010951	pop1	100	47.025	Astatotilapia_calliptera
ENSOCUG00000017400	POP1	100	45.596	ENSAMXG00000014483	POP1	100	45.138	Astyanax_mexicanus
ENSOCUG00000017400	POP1	100	77.648	ENSBTAG00000012596	POP1	100	77.745	Bos_taurus
ENSOCUG00000017400	POP1	100	80.855	ENSCJAG00000015567	POP1	100	80.855	Callithrix_jacchus
ENSOCUG00000017400	POP1	100	77.154	ENSCAFG00000000469	POP1	100	77.154	Canis_familiaris
ENSOCUG00000017400	POP1	100	78.037	ENSCAFG00020026765	POP1	100	78.037	Canis_lupus_dingo
ENSOCUG00000017400	POP1	100	76.990	ENSCHIG00000017066	POP1	100	77.573	Capra_hircus
ENSOCUG00000017400	POP1	100	81.633	ENSTSYG00000003097	POP1	100	81.633	Carlito_syrichta
ENSOCUG00000017400	POP1	100	75.048	ENSCAPG00000007251	POP1	100	75.048	Cavia_aperea
ENSOCUG00000017400	POP1	100	77.745	ENSCPOG00000002901	POP1	100	77.745	Cavia_porcellus
ENSOCUG00000017400	POP1	100	80.272	ENSCCAG00000018939	POP1	100	80.272	Cebus_capucinus
ENSOCUG00000017400	POP1	100	81.633	ENSCATG00000040916	POP1	100	81.633	Cercocebus_atys
ENSOCUG00000017400	POP1	100	79.689	ENSCLAG00000007208	POP1	97	79.689	Chinchilla_lanigera
ENSOCUG00000017400	POP1	90	82.232	ENSCSAG00000012340	POP1	99	82.232	Chlorocebus_sabaeus
ENSOCUG00000017400	POP1	95	76.459	ENSCHOG00000011432	POP1	100	76.254	Choloepus_hoffmanni
ENSOCUG00000017400	POP1	100	63.372	ENSCPBG00000006373	POP1	100	63.372	Chrysemys_picta_bellii
ENSOCUG00000017400	POP1	100	81.633	ENSCANG00000001647	POP1	100	81.633	Colobus_angolensis_palliatus
ENSOCUG00000017400	POP1	100	73.107	ENSCGRG00001017308	Pop1	100	72.692	Cricetulus_griseus_chok1gshd
ENSOCUG00000017400	POP1	100	67.961	ENSCGRG00000010824	Pop1	100	67.541	Cricetulus_griseus_crigri
ENSOCUG00000017400	POP1	100	44.844	ENSCSEG00000008737	POP1	100	44.747	Cynoglossus_semilaevis
ENSOCUG00000017400	POP1	100	46.358	ENSCVAG00000022248	pop1	100	46.110	Cyprinodon_variegatus
ENSOCUG00000017400	POP1	100	75.235	ENSDNOG00000019974	POP1	100	75.235	Dasypus_novemcinctus
ENSOCUG00000017400	POP1	100	69.952	ENSDORG00000015384	Pop1	100	69.952	Dipodomys_ordii
ENSOCUG00000017400	POP1	61	33.070	FBgn0026702	l(1)G0045	70	32.915	Drosophila_melanogaster
ENSOCUG00000017400	POP1	89	67.770	ENSETEG00000007839	POP1	88	67.770	Echinops_telfairi
ENSOCUG00000017400	POP1	100	81.633	ENSEASG00005003189	POP1	98	81.633	Equus_asinus_asinus
ENSOCUG00000017400	POP1	100	81.438	ENSECAG00000024236	POP1	100	81.438	Equus_caballus
ENSOCUG00000017400	POP1	67	69.079	ENSEEUG00000003050	-	70	69.365	Erinaceus_europaeus
ENSOCUG00000017400	POP1	100	46.767	ENSELUG00000003526	pop1	100	47.398	Esox_lucius
ENSOCUG00000017400	POP1	100	79.981	ENSFCAG00000002168	POP1	100	79.981	Felis_catus
ENSOCUG00000017400	POP1	100	57.224	ENSFALG00000005711	POP1	100	57.224	Ficedula_albicollis
ENSOCUG00000017400	POP1	100	79.397	ENSFDAG00000017068	POP1	100	79.397	Fukomys_damarensis
ENSOCUG00000017400	POP1	92	50.341	ENSFHEG00000019518	pop1	100	45.774	Fundulus_heteroclitus
ENSOCUG00000017400	POP1	85	50.373	ENSGMOG00000000659	POP1	95	50.373	Gadus_morhua
ENSOCUG00000017400	POP1	100	46.520	ENSGAFG00000019770	POP1	100	46.044	Gambusia_affinis
ENSOCUG00000017400	POP1	100	45.033	ENSGACG00000003499	pop1	100	44.939	Gasterosteus_aculeatus
ENSOCUG00000017400	POP1	100	61.700	ENSGAGG00000011737	POP1	98	62.838	Gopherus_agassizii
ENSOCUG00000017400	POP1	100	81.924	ENSGGOG00000003176	POP1	100	81.924	Gorilla_gorilla
ENSOCUG00000017400	POP1	100	47.075	ENSHBUG00000021583	pop1	100	46.931	Haplochromis_burtoni
ENSOCUG00000017400	POP1	100	79.300	ENSHGLG00000006029	POP1	100	79.300	Heterocephalus_glaber_female
ENSOCUG00000017400	POP1	100	79.300	ENSHGLG00100016879	POP1	100	79.300	Heterocephalus_glaber_male
ENSOCUG00000017400	POP1	90	49.360	ENSHCOG00000013888	pop1	96	48.837	Hippocampus_comes
ENSOCUG00000017400	POP1	100	44.083	ENSIPUG00000018336	pop1	93	54.000	Ictalurus_punctatus
ENSOCUG00000017400	POP1	100	79.786	ENSSTOG00000011455	POP1	97	79.786	Ictidomys_tridecemlineatus
ENSOCUG00000017400	POP1	100	73.469	ENSJJAG00000013325	Pop1	100	73.469	Jaculus_jaculus
ENSOCUG00000017400	POP1	100	46.183	ENSKMAG00000001346	POP1	100	46.660	Kryptolebias_marmoratus
ENSOCUG00000017400	POP1	81	53.530	ENSLBEG00000024457	POP1	92	53.110	Labrus_bergylta
ENSOCUG00000017400	POP1	91	55.955	ENSLACG00000012498	POP1	98	55.852	Latimeria_chalumnae
ENSOCUG00000017400	POP1	100	50.913	ENSLOCG00000009817	POP1	100	50.673	Lepisosteus_oculatus
ENSOCUG00000017400	POP1	100	80.369	ENSLAFG00000010770	POP1	100	80.369	Loxodonta_africana
ENSOCUG00000017400	POP1	100	81.633	ENSMFAG00000000347	POP1	100	81.633	Macaca_fascicularis
ENSOCUG00000017400	POP1	100	81.050	ENSMNEG00000036870	POP1	100	81.050	Macaca_nemestrina
ENSOCUG00000017400	POP1	100	81.535	ENSMLEG00000034986	POP1	100	81.535	Mandrillus_leucophaeus
ENSOCUG00000017400	POP1	100	45.480	ENSMAMG00000004040	pop1	100	45.634	Mastacembelus_armatus
ENSOCUG00000017400	POP1	100	47.170	ENSMZEG00005025448	pop1	100	47.070	Maylandia_zebra
ENSOCUG00000017400	POP1	100	55.827	ENSMGAG00000012167	POP1	100	56.232	Meleagris_gallopavo
ENSOCUG00000017400	POP1	100	73.107	ENSMAUG00000017537	Pop1	100	73.107	Mesocricetus_auratus
ENSOCUG00000017400	POP1	100	81.244	ENSMICG00000004361	POP1	100	81.244	Microcebus_murinus
ENSOCUG00000017400	POP1	100	73.230	ENSMOCG00000006356	Pop1	100	73.715	Microtus_ochrogaster
ENSOCUG00000017400	POP1	100	43.545	ENSMMOG00000018242	pop1	100	43.340	Mola_mola
ENSOCUG00000017400	POP1	100	66.379	ENSMODG00000006561	POP1	100	66.379	Monodelphis_domestica
ENSOCUG00000017400	POP1	100	46.321	ENSMALG00000012621	POP1	100	46.503	Monopterus_albus
ENSOCUG00000017400	POP1	100	73.398	MGP_CAROLIEiJ_G0019726	Pop1	100	73.398	Mus_caroli
ENSOCUG00000017400	POP1	100	73.786	ENSMUSG00000022325	Pop1	100	73.786	Mus_musculus
ENSOCUG00000017400	POP1	100	73.275	MGP_PahariEiJ_G0019735	Pop1	100	73.275	Mus_pahari
ENSOCUG00000017400	POP1	100	73.301	MGP_SPRETEiJ_G0020622	Pop1	100	73.301	Mus_spretus
ENSOCUG00000017400	POP1	100	78.316	ENSMPUG00000015250	POP1	100	78.316	Mustela_putorius_furo
ENSOCUG00000017400	POP1	100	76.043	ENSMLUG00000010204	POP1	100	75.849	Myotis_lucifugus
ENSOCUG00000017400	POP1	100	77.648	ENSNGAG00000001582	Pop1	100	77.648	Nannospalax_galili
ENSOCUG00000017400	POP1	89	48.021	ENSNBRG00000002356	pop1	94	47.881	Neolamprologus_brichardi
ENSOCUG00000017400	POP1	100	81.147	ENSNLEG00000002541	POP1	100	81.147	Nomascus_leucogenys
ENSOCUG00000017400	POP1	92	60.718	ENSMEUG00000003118	POP1	97	60.718	Notamacropus_eugenii
ENSOCUG00000017400	POP1	100	81.244	ENSOPRG00000007667	POP1	100	81.147	Ochotona_princeps
ENSOCUG00000017400	POP1	100	79.243	ENSODEG00000003984	POP1	100	79.243	Octodon_degus
ENSOCUG00000017400	POP1	100	47.677	ENSONIG00000016445	pop1	97	52.575	Oreochromis_niloticus
ENSOCUG00000017400	POP1	59	64.912	ENSOANG00000001278	-	94	64.912	Ornithorhynchus_anatinus
ENSOCUG00000017400	POP1	92	48.750	ENSORLG00000002839	pop1	100	46.558	Oryzias_latipes
ENSOCUG00000017400	POP1	90	48.195	ENSORLG00020022450	POP1	96	48.620	Oryzias_latipes_hni
ENSOCUG00000017400	POP1	92	49.062	ENSORLG00015012746	POP1	100	46.941	Oryzias_latipes_hsok
ENSOCUG00000017400	POP1	100	46.339	ENSOMEG00000006915	pop1	99	46.184	Oryzias_melastigma
ENSOCUG00000017400	POP1	100	79.786	ENSOGAG00000001466	POP1	100	79.786	Otolemur_garnettii
ENSOCUG00000017400	POP1	100	82.021	ENSPPAG00000018410	POP1	100	82.021	Pan_paniscus
ENSOCUG00000017400	POP1	100	79.515	ENSPPRG00000005002	POP1	100	79.515	Panthera_pardus
ENSOCUG00000017400	POP1	100	80.000	ENSPTIG00000016527	POP1	100	80.000	Panthera_tigris_altaica
ENSOCUG00000017400	POP1	100	82.021	ENSPTRG00000020458	POP1	100	82.021	Pan_troglodytes
ENSOCUG00000017400	POP1	100	81.535	ENSPANG00000009704	POP1	100	81.535	Papio_anubis
ENSOCUG00000017400	POP1	100	47.950	ENSPKIG00000016325	POP1	100	48.099	Paramormyrops_kingsleyae
ENSOCUG00000017400	POP1	100	61.524	ENSPSIG00000012343	POP1	100	61.524	Pelodiscus_sinensis
ENSOCUG00000017400	POP1	100	45.933	ENSPMGG00000022253	POP1	100	46.080	Periophthalmus_magnuspinnatus
ENSOCUG00000017400	POP1	99	72.286	ENSPEMG00000023633	Pop1	100	72.286	Peromyscus_maniculatus_bairdii
ENSOCUG00000017400	POP1	90	43.816	ENSPMAG00000003209	POP1	100	43.533	Petromyzon_marinus
ENSOCUG00000017400	POP1	100	66.538	ENSPCIG00000012216	POP1	100	67.406	Phascolarctos_cinereus
ENSOCUG00000017400	POP1	100	47.115	ENSPFOG00000012490	POP1	100	47.019	Poecilia_formosa
ENSOCUG00000017400	POP1	100	47.019	ENSPLAG00000004646	POP1	100	46.923	Poecilia_latipinna
ENSOCUG00000017400	POP1	100	47.166	ENSPMEG00000019592	POP1	100	47.166	Poecilia_mexicana
ENSOCUG00000017400	POP1	100	46.616	ENSPREG00000020951	POP1	100	46.552	Poecilia_reticulata
ENSOCUG00000017400	POP1	100	81.730	ENSPPYG00000018777	POP1	100	81.730	Pongo_abelii
ENSOCUG00000017400	POP1	100	73.010	ENSPCAG00000016662	POP1	100	72.233	Procavia_capensis
ENSOCUG00000017400	POP1	100	82.216	ENSPCOG00000019420	POP1	100	82.216	Propithecus_coquereli
ENSOCUG00000017400	POP1	100	78.544	ENSPVAG00000014468	POP1	100	78.544	Pteropus_vampyrus
ENSOCUG00000017400	POP1	89	48.172	ENSPNYG00000004476	pop1	99	46.910	Pundamilia_nyererei
ENSOCUG00000017400	POP1	100	44.586	ENSPNAG00000000265	pop1	100	42.172	Pygocentrus_nattereri
ENSOCUG00000017400	POP1	100	73.786	ENSRNOG00000005243	Pop1	100	73.786	Rattus_norvegicus
ENSOCUG00000017400	POP1	100	81.535	ENSRBIG00000007996	POP1	100	81.535	Rhinopithecus_bieti
ENSOCUG00000017400	POP1	100	81.730	ENSRROG00000012334	POP1	100	81.730	Rhinopithecus_roxellana
ENSOCUG00000017400	POP1	99	81.514	ENSSBOG00000020830	POP1	100	81.514	Saimiri_boliviensis_boliviensis
ENSOCUG00000017400	POP1	100	66.795	ENSSHAG00000000296	POP1	100	66.795	Sarcophilus_harrisii
ENSOCUG00000017400	POP1	94	50.066	ENSSFOG00015007429	pop1	98	50.066	Scleropages_formosus
ENSOCUG00000017400	POP1	85	52.446	ENSSMAG00000010467	POP1	98	51.994	Scophthalmus_maximus
ENSOCUG00000017400	POP1	100	45.865	ENSSDUG00000007817	POP1	100	45.849	Seriola_dumerili
ENSOCUG00000017400	POP1	100	45.771	ENSSLDG00000012565	POP1	100	45.806	Seriola_lalandi_dorsalis
ENSOCUG00000017400	POP1	100	58.261	ENSSPUG00000003550	-	100	58.261	Sphenodon_punctatus
ENSOCUG00000017400	POP1	90	50.268	ENSSPAG00000014955	pop1	94	49.946	Stegastes_partitus
ENSOCUG00000017400	POP1	100	77.454	ENSSSCG00000006078	POP1	100	77.454	Sus_scrofa
ENSOCUG00000017400	POP1	92	55.346	ENSTGUG00000012011	-	100	55.346	Taeniopygia_guttata
ENSOCUG00000017400	POP1	91	48.164	ENSTRUG00000010856	pop1	94	47.789	Takifugu_rubripes
ENSOCUG00000017400	POP1	92	47.673	ENSTNIG00000013297	pop1	99	47.555	Tetraodon_nigroviridis
ENSOCUG00000017400	POP1	95	77.096	ENSTBEG00000014214	POP1	100	77.096	Tupaia_belangeri
ENSOCUG00000017400	POP1	100	78.134	ENSTTRG00000016071	POP1	100	78.134	Tursiops_truncatus
ENSOCUG00000017400	POP1	99	75.147	ENSUAMG00000017309	POP1	100	75.147	Ursus_americanus
ENSOCUG00000017400	POP1	100	77.264	ENSUMAG00000016952	POP1	100	84.861	Ursus_maritimus
ENSOCUG00000017400	POP1	82	85.971	ENSVPAG00000008278	POP1	82	85.971	Vicugna_pacos
ENSOCUG00000017400	POP1	100	78.426	ENSVVUG00000010994	POP1	100	78.426	Vulpes_vulpes
ENSOCUG00000017400	POP1	100	43.186	ENSXCOG00000017043	POP1	100	43.186	Xiphophorus_couchianus
ENSOCUG00000017400	POP1	100	46.250	ENSXMAG00000002472	POP1	100	46.058	Xiphophorus_maculatus