EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000017418 (Gene tree)
Gene ID: 100354054
Gene Symbol: TARBP1
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 79728 bases
Position: chr16:33733254-33812981
Accession: 100354054
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000014969	SpoU_methylase	PF00588.19	5.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000017421	TARBP1-201	7942	XM_002717327	ENSOCUP00000014969	1629 (aa)	XP_002717373	G1TDN7

Gene Model

Click here to download ENSOCUG00000017418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000017418's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000017418	TARBP1	99	85.406	ENSG00000059588	TARBP1	100	85.530	Homo_sapiens
ENSOCUG00000017418	TARBP1	85	44.499	ENSAPOG00000016419	si:dkey-85a20.4	85	44.429	Acanthochromis_polyacanthus
ENSOCUG00000017418	TARBP1	84	84.103	ENSAMEG00000003359	TARBP1	99	84.103	Ailuropoda_melanoleuca
ENSOCUG00000017418	TARBP1	91	43.828	ENSATEG00000020266	si:dkey-85a20.4	85	45.148	Anabas_testudineus
ENSOCUG00000017418	TARBP1	83	66.181	ENSAPLG00000007666	TARBP1	99	67.226	Anas_platyrhynchos
ENSOCUG00000017418	TARBP1	98	59.080	ENSACAG00000001142	TARBP1	98	57.866	Anolis_carolinensis
ENSOCUG00000017418	TARBP1	99	83.046	ENSBTAG00000004517	TARBP1	99	83.046	Bos_taurus
ENSOCUG00000017418	TARBP1	99	84.421	ENSCJAG00000018155	TARBP1	100	84.544	Callithrix_jacchus
ENSOCUG00000017418	TARBP1	87	83.857	ENSCAFG00000011533	TARBP1	99	84.065	Canis_familiaris
ENSOCUG00000017418	TARBP1	99	82.729	ENSCAFG00020027141	TARBP1	99	83.344	Canis_lupus_dingo
ENSOCUG00000017418	TARBP1	99	81.813	ENSCHIG00000011437	TARBP1	99	82.244	Capra_hircus
ENSOCUG00000017418	TARBP1	80	85.605	ENSTSYG00000010382	TARBP1	97	85.758	Carlito_syrichta
ENSOCUG00000017418	TARBP1	78	70.039	ENSCAPG00000010831	TARBP1	99	69.882	Cavia_aperea
ENSOCUG00000017418	TARBP1	99	76.994	ENSCPOG00000013995	TARBP1	99	76.747	Cavia_porcellus
ENSOCUG00000017418	TARBP1	99	84.791	ENSCCAG00000037278	TARBP1	100	84.914	Cebus_capucinus
ENSOCUG00000017418	TARBP1	99	85.099	ENSCATG00000011754	TARBP1	100	85.406	Cercocebus_atys
ENSOCUG00000017418	TARBP1	83	82.500	ENSCLAG00000003655	TARBP1	99	82.500	Chinchilla_lanigera
ENSOCUG00000017418	TARBP1	79	85.070	ENSCSAG00000010100	TARBP1	100	85.070	Chlorocebus_sabaeus
ENSOCUG00000017418	TARBP1	93	64.369	ENSCPBG00000005587	TARBP1	98	64.286	Chrysemys_picta_bellii
ENSOCUG00000017418	TARBP1	83	85.966	ENSCANG00000034343	TARBP1	100	85.966	Colobus_angolensis_palliatus
ENSOCUG00000017418	TARBP1	99	74.506	ENSCGRG00001016690	Tarbp1	99	74.198	Cricetulus_griseus_chok1gshd
ENSOCUG00000017418	TARBP1	90	75.560	ENSCGRG00000016893	Tarbp1	97	76.923	Cricetulus_griseus_crigri
ENSOCUG00000017418	TARBP1	99	38.757	ENSCSEG00000005255	si:dkey-85a20.4	84	47.510	Cynoglossus_semilaevis
ENSOCUG00000017418	TARBP1	84	45.279	ENSDARG00000079055	si:dkey-85a20.4	99	52.778	Danio_rerio
ENSOCUG00000017418	TARBP1	99	83.152	ENSDNOG00000008637	TARBP1	99	83.020	Dasypus_novemcinctus
ENSOCUG00000017418	TARBP1	79	73.668	ENSDORG00000007984	Tarbp1	100	73.668	Dipodomys_ordii
ENSOCUG00000017418	TARBP1	99	86.171	ENSEASG00005000252	TARBP1	99	86.490	Equus_asinus_asinus
ENSOCUG00000017418	TARBP1	99	86.552	ENSECAG00000023673	TARBP1	99	86.552	Equus_caballus
ENSOCUG00000017418	TARBP1	84	43.997	ENSELUG00000012193	si:dkey-85a20.4	86	43.997	Esox_lucius
ENSOCUG00000017418	TARBP1	99	82.397	ENSFCAG00000014183	TARBP1	99	82.397	Felis_catus
ENSOCUG00000017418	TARBP1	80	66.232	ENSFALG00000013565	TARBP1	99	66.005	Ficedula_albicollis
ENSOCUG00000017418	TARBP1	79	77.582	ENSFDAG00000001308	TARBP1	99	77.429	Fukomys_damarensis
ENSOCUG00000017418	TARBP1	99	35.615	ENSFHEG00000007565	si:dkey-85a20.4	80	50.811	Fundulus_heteroclitus
ENSOCUG00000017418	TARBP1	83	43.538	ENSGMOG00000004549	si:dkey-85a20.4	98	43.642	Gadus_morhua
ENSOCUG00000017418	TARBP1	99	58.538	ENSGALG00000011000	TARBP1	99	59.717	Gallus_gallus
ENSOCUG00000017418	TARBP1	99	40.383	ENSGAFG00000007387	si:dkey-85a20.4	85	43.697	Gambusia_affinis
ENSOCUG00000017418	TARBP1	85	44.915	ENSGACG00000005865	si:dkey-85a20.4	99	44.940	Gasterosteus_aculeatus
ENSOCUG00000017418	TARBP1	92	71.010	ENSGAGG00000012102	TARBP1	97	69.746	Gopherus_agassizii
ENSOCUG00000017418	TARBP1	84	83.394	ENSGGOG00000022879	TARBP1	99	83.394	Gorilla_gorilla
ENSOCUG00000017418	TARBP1	85	45.339	ENSHBUG00000008877	si:dkey-85a20.4	85	45.148	Haplochromis_burtoni
ENSOCUG00000017418	TARBP1	99	79.344	ENSHGLG00000011592	TARBP1	99	79.035	Heterocephalus_glaber_female
ENSOCUG00000017418	TARBP1	94	79.389	ENSHGLG00100015169	TARBP1	99	79.389	Heterocephalus_glaber_male
ENSOCUG00000017418	TARBP1	98	39.480	ENSIPUG00000005249	si:dkey-85a20.4	84	42.375	Ictalurus_punctatus
ENSOCUG00000017418	TARBP1	89	75.610	ENSSTOG00000032291	TARBP1	99	84.444	Ictidomys_tridecemlineatus
ENSOCUG00000017418	TARBP1	90	74.321	ENSJJAG00000017840	Tarbp1	99	74.321	Jaculus_jaculus
ENSOCUG00000017418	TARBP1	80	45.335	ENSKMAG00000017546	si:dkey-85a20.4	77	46.123	Kryptolebias_marmoratus
ENSOCUG00000017418	TARBP1	65	49.062	ENSLBEG00000012132	si:dkey-85a20.4	78	49.062	Labrus_bergylta
ENSOCUG00000017418	TARBP1	99	51.422	ENSLACG00000004337	TARBP1	99	51.209	Latimeria_chalumnae
ENSOCUG00000017418	TARBP1	99	46.252	ENSLOCG00000016214	si:dkey-85a20.4	85	50.142	Lepisosteus_oculatus
ENSOCUG00000017418	TARBP1	96	81.916	ENSLAFG00000011394	TARBP1	99	81.778	Loxodonta_africana
ENSOCUG00000017418	TARBP1	99	82.121	ENSMFAG00000041068	TARBP1	100	81.936	Macaca_fascicularis
ENSOCUG00000017418	TARBP1	99	82.595	ENSMMUG00000021703	TARBP1	100	82.841	Macaca_mulatta
ENSOCUG00000017418	TARBP1	99	85.283	ENSMNEG00000045002	TARBP1	100	85.406	Macaca_nemestrina
ENSOCUG00000017418	TARBP1	83	85.619	ENSMLEG00000044182	TARBP1	100	85.619	Mandrillus_leucophaeus
ENSOCUG00000017418	TARBP1	91	43.709	ENSMAMG00000021760	si:dkey-85a20.4	86	45.143	Mastacembelus_armatus
ENSOCUG00000017418	TARBP1	85	45.230	ENSMZEG00005005751	si:dkey-85a20.4	85	45.346	Maylandia_zebra
ENSOCUG00000017418	TARBP1	99	73.691	ENSMAUG00000020968	Tarbp1	99	73.444	Mesocricetus_auratus
ENSOCUG00000017418	TARBP1	99	77.160	ENSMICG00000015280	TARBP1	99	77.346	Microcebus_murinus
ENSOCUG00000017418	TARBP1	99	73.205	ENSMOCG00000004128	Tarbp1	99	73.144	Microtus_ochrogaster
ENSOCUG00000017418	TARBP1	98	40.290	ENSMMOG00000007795	si:dkey-85a20.4	85	43.679	Mola_mola
ENSOCUG00000017418	TARBP1	99	71.722	ENSMODG00000008504	TARBP1	99	71.782	Monodelphis_domestica
ENSOCUG00000017418	TARBP1	84	44.932	ENSMALG00000002916	si:dkey-85a20.4	85	45.083	Monopterus_albus
ENSOCUG00000017418	TARBP1	99	72.441	MGP_CAROLIEiJ_G0031729	Tarbp1	99	72.256	Mus_caroli
ENSOCUG00000017418	TARBP1	99	72.632	ENSMUSG00000090290	Tarbp1	99	72.384	Mus_musculus
ENSOCUG00000017418	TARBP1	99	73.053	MGP_PahariEiJ_G0023326	Tarbp1	99	72.868	Mus_pahari
ENSOCUG00000017418	TARBP1	99	72.755	MGP_SPRETEiJ_G0032846	Tarbp1	99	72.508	Mus_spretus
ENSOCUG00000017418	TARBP1	76	81.913	ENSMPUG00000002802	TARBP1	99	81.672	Mustela_putorius_furo
ENSOCUG00000017418	TARBP1	84	74.400	ENSMLUG00000002414	TARBP1	99	74.691	Myotis_lucifugus
ENSOCUG00000017418	TARBP1	99	85.591	ENSNLEG00000002518	TARBP1	100	85.714	Nomascus_leucogenys
ENSOCUG00000017418	TARBP1	67	74.522	ENSMEUG00000011370	-	67	74.522	Notamacropus_eugenii
ENSOCUG00000017418	TARBP1	74	90.625	ENSOPRG00000013822	TARBP1	71	90.625	Ochotona_princeps
ENSOCUG00000017418	TARBP1	99	73.704	ENSODEG00000005238	TARBP1	99	73.639	Octodon_degus
ENSOCUG00000017418	TARBP1	85	44.813	ENSONIG00000009789	si:dkey-85a20.4	99	44.859	Oreochromis_niloticus
ENSOCUG00000017418	TARBP1	99	40.205	ENSORLG00000010529	si:dkey-85a20.4	85	43.530	Oryzias_latipes
ENSOCUG00000017418	TARBP1	99	39.831	ENSORLG00020019264	si:dkey-85a20.4	85	43.179	Oryzias_latipes_hni
ENSOCUG00000017418	TARBP1	99	39.952	ENSORLG00015003276	si:dkey-85a20.4	85	43.251	Oryzias_latipes_hsok
ENSOCUG00000017418	TARBP1	99	82.407	ENSOGAG00000002379	TARBP1	99	82.407	Otolemur_garnettii
ENSOCUG00000017418	TARBP1	90	89.130	ENSOARG00000003434	TARBP1	99	82.763	Ovis_aries
ENSOCUG00000017418	TARBP1	84	86.070	ENSPPAG00000028097	TARBP1	100	86.070	Pan_paniscus
ENSOCUG00000017418	TARBP1	99	75.200	ENSPPRG00000013561	TARBP1	99	73.444	Panthera_pardus
ENSOCUG00000017418	TARBP1	82	84.552	ENSPTIG00000009281	TARBP1	99	84.552	Panthera_tigris_altaica
ENSOCUG00000017418	TARBP1	99	85.178	ENSPTRG00000002124	TARBP1	100	85.240	Pan_troglodytes
ENSOCUG00000017418	TARBP1	99	85.283	ENSPANG00000021933	TARBP1	100	85.406	Papio_anubis
ENSOCUG00000017418	TARBP1	99	43.120	ENSPKIG00000016716	si:dkey-85a20.4	85	46.272	Paramormyrops_kingsleyae
ENSOCUG00000017418	TARBP1	79	69.051	ENSPSIG00000010699	TARBP1	99	68.974	Pelodiscus_sinensis
ENSOCUG00000017418	TARBP1	96	76.528	ENSPEMG00000006888	Tarbp1	99	76.528	Peromyscus_maniculatus_bairdii
ENSOCUG00000017418	TARBP1	91	81.000	ENSPCIG00000029710	TARBP1	98	81.000	Phascolarctos_cinereus
ENSOCUG00000017418	TARBP1	85	44.247	ENSPFOG00000013020	si:dkey-85a20.4	99	44.318	Poecilia_formosa
ENSOCUG00000017418	TARBP1	99	41.010	ENSPLAG00000006044	si:dkey-85a20.4	85	44.311	Poecilia_latipinna
ENSOCUG00000017418	TARBP1	99	40.947	ENSPMEG00000017857	si:dkey-85a20.4	85	44.240	Poecilia_mexicana
ENSOCUG00000017418	TARBP1	99	40.923	ENSPREG00000022753	si:dkey-85a20.4	85	44.358	Poecilia_reticulata
ENSOCUG00000017418	TARBP1	91	85.637	ENSPPYG00000000102	TARBP1	100	86.179	Pongo_abelii
ENSOCUG00000017418	TARBP1	88	75.949	ENSPCAG00000004808	TARBP1	88	76.923	Procavia_capensis
ENSOCUG00000017418	TARBP1	99	82.818	ENSPCOG00000005666	TARBP1	99	83.066	Propithecus_coquereli
ENSOCUG00000017418	TARBP1	99	68.165	ENSPVAG00000014798	TARBP1	99	68.658	Pteropus_vampyrus
ENSOCUG00000017418	TARBP1	85	44.201	ENSPNYG00000019135	si:dkey-85a20.4	85	44.099	Pundamilia_nyererei
ENSOCUG00000017418	TARBP1	99	69.297	ENSRNOG00000053574	Tarbp1	99	69.051	Rattus_norvegicus
ENSOCUG00000017418	TARBP1	98	78.947	ENSRBIG00000043362	TARBP1	99	93.750	Rhinopithecus_bieti
ENSOCUG00000017418	TARBP1	99	81.404	ENSRROG00000029527	TARBP1	100	81.712	Rhinopithecus_roxellana
ENSOCUG00000017418	TARBP1	89	83.405	ENSSBOG00000034503	TARBP1	100	87.755	Saimiri_boliviensis_boliviensis
ENSOCUG00000017418	TARBP1	82	74.684	ENSSHAG00000000013	TARBP1	99	74.684	Sarcophilus_harrisii
ENSOCUG00000017418	TARBP1	84	45.624	ENSSFOG00015002660	si:dkey-85a20.4	97	46.399	Scleropages_formosus
ENSOCUG00000017418	TARBP1	91	43.918	ENSSMAG00000007081	si:dkey-85a20.4	82	46.320	Scophthalmus_maximus
ENSOCUG00000017418	TARBP1	99	40.835	ENSSDUG00000023566	si:dkey-85a20.4	85	43.670	Seriola_dumerili
ENSOCUG00000017418	TARBP1	99	42.540	ENSSLDG00000020200	si:dkey-85a20.4	86	45.801	Seriola_lalandi_dorsalis
ENSOCUG00000017418	TARBP1	88	81.579	ENSSARG00000012207	TARBP1	89	81.579	Sorex_araneus
ENSOCUG00000017418	TARBP1	99	63.731	ENSSPUG00000015364	TARBP1	99	63.364	Sphenodon_punctatus
ENSOCUG00000017418	TARBP1	91	42.950	ENSSPAG00000007213	si:dkey-85a20.4	88	43.864	Stegastes_partitus
ENSOCUG00000017418	TARBP1	99	84.360	ENSSSCG00000010160	TARBP1	99	85.194	Sus_scrofa
ENSOCUG00000017418	TARBP1	80	66.616	ENSTGUG00000010214	TARBP1	100	66.514	Taeniopygia_guttata
ENSOCUG00000017418	TARBP1	91	39.601	ENSTNIG00000016586	si:dkey-85a20.4	99	44.332	Tetraodon_nigroviridis
ENSOCUG00000017418	TARBP1	91	81.998	ENSTTRG00000008707	TARBP1	95	82.143	Tursiops_truncatus
ENSOCUG00000017418	TARBP1	81	83.535	ENSUMAG00000006730	TARBP1	99	83.535	Ursus_maritimus
ENSOCUG00000017418	TARBP1	79	88.542	ENSVPAG00000007665	TARBP1	87	85.437	Vicugna_pacos
ENSOCUG00000017418	TARBP1	85	84.275	ENSVVUG00000007460	TARBP1	99	83.039	Vulpes_vulpes
ENSOCUG00000017418	TARBP1	83	55.102	ENSXETG00000016224	tarbp1	99	55.029	Xenopus_tropicalis
ENSOCUG00000017418	TARBP1	78	46.922	ENSXCOG00000011779	si:dkey-85a20.4	93	46.922	Xiphophorus_couchianus
ENSOCUG00000017418	TARBP1	64	41.914	ENSXMAG00000009600	si:dkey-85a20.4	100	41.914	Xiphophorus_maculatus