EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000017522 (Gene tree)
Gene ID: 100339300
Gene Symbol: TGS1
Alias: -
Full Name: trimethylguanosine synthase 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 44561 bases
Position: chr3:71305182-71349742
Accession: 100339300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000015055	Methyltransf_15	PF09445.10	1.4e-42	1	1
ENSOCUP00000015055	UPF0020	PF01170.18	3.5e-06	1	1
ENSOCUP00000015055	Met_10	PF02475.16	5.9e-07	1	1
ENSOCUP00000015055	Methyltransf_31	PF13847.6	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000017522	TGS1-201	2562	XM_008255539	ENSOCUP00000015055	853 (aa)	XP_008253761	G1TDV8

Gene Model

Click here to download ENSOCUG00000017522's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000017522's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000017522	TGS1	100	79.089	ENSG00000137574	TGS1	100	78.738	Homo_sapiens
ENSOCUG00000017522	TGS1	65	38.240	ENSAPOG00000004321	-	99	38.917	Acanthochromis_polyacanthus
ENSOCUG00000017522	TGS1	100	79.138	ENSAMEG00000001781	TGS1	100	79.487	Ailuropoda_melanoleuca
ENSOCUG00000017522	TGS1	96	37.286	ENSAOCG00000022799	lyn	96	37.628	Amphiprion_ocellaris
ENSOCUG00000017522	TGS1	76	40.056	ENSAPEG00000019723	TGS1	96	40.336	Amphiprion_percula
ENSOCUG00000017522	TGS1	73	49.394	ENSAPLG00000006073	-	95	51.672	Anas_platyrhynchos
ENSOCUG00000017522	TGS1	99	49.779	ENSACAG00000017988	TGS1	92	50.554	Anolis_carolinensis
ENSOCUG00000017522	TGS1	99	70.526	ENSANAG00000035525	TGS1	100	70.175	Aotus_nancymaae
ENSOCUG00000017522	TGS1	98	38.101	ENSAMXG00000014086	lyn	98	37.801	Astyanax_mexicanus
ENSOCUG00000017522	TGS1	100	71.379	ENSBTAG00000005898	TGS1	100	71.612	Bos_taurus
ENSOCUG00000017522	TGS1	99	78.012	ENSCJAG00000016657	TGS1	98	77.778	Callithrix_jacchus
ENSOCUG00000017522	TGS1	100	78.205	ENSCAFG00000007011	TGS1	100	78.555	Canis_familiaris
ENSOCUG00000017522	TGS1	100	77.363	ENSCAFG00020015485	TGS1	100	77.713	Canis_lupus_dingo
ENSOCUG00000017522	TGS1	100	71.879	ENSCHIG00000013976	TGS1	100	71.995	Capra_hircus
ENSOCUG00000017522	TGS1	100	78.312	ENSTSYG00000000171	TGS1	100	78.312	Carlito_syrichta
ENSOCUG00000017522	TGS1	96	67.073	ENSCAPG00000013732	TGS1	99	66.951	Cavia_aperea
ENSOCUG00000017522	TGS1	100	71.846	ENSCPOG00000009713	TGS1	99	71.846	Cavia_porcellus
ENSOCUG00000017522	TGS1	99	79.580	ENSCCAG00000030476	TGS1	99	79.347	Cebus_capucinus
ENSOCUG00000017522	TGS1	100	78.855	ENSCATG00000035375	TGS1	100	78.621	Cercocebus_atys
ENSOCUG00000017522	TGS1	100	73.832	ENSCLAG00000009468	TGS1	99	73.949	Chinchilla_lanigera
ENSOCUG00000017522	TGS1	93	77.193	ENSCSAG00000014611	TGS1	99	77.068	Chlorocebus_sabaeus
ENSOCUG00000017522	TGS1	100	74.096	ENSCHOG00000001462	TGS1	100	73.862	Choloepus_hoffmanni
ENSOCUG00000017522	TGS1	99	53.750	ENSCPBG00000004958	TGS1	99	55.040	Chrysemys_picta_bellii
ENSOCUG00000017522	TGS1	100	78.855	ENSCANG00000041389	TGS1	100	78.621	Colobus_angolensis_palliatus
ENSOCUG00000017522	TGS1	100	72.834	ENSCGRG00001019470	Tgs1	99	73.302	Cricetulus_griseus_chok1gshd
ENSOCUG00000017522	TGS1	100	73.629	ENSCGRG00000008981	Tgs1	99	73.512	Cricetulus_griseus_crigri
ENSOCUG00000017522	TGS1	98	37.209	ENSDARG00000107511	lyn	99	72.222	Danio_rerio
ENSOCUG00000017522	TGS1	99	76.636	ENSDNOG00000008353	TGS1	99	76.636	Dasypus_novemcinctus
ENSOCUG00000017522	TGS1	100	73.684	ENSDORG00000012484	Tgs1	100	74.152	Dipodomys_ordii
ENSOCUG00000017522	TGS1	81	72.807	ENSETEG00000005126	TGS1	85	72.807	Echinops_telfairi
ENSOCUG00000017522	TGS1	93	78.742	ENSEASG00005016371	TGS1	95	78.742	Equus_asinus_asinus
ENSOCUG00000017522	TGS1	100	79.487	ENSECAG00000019399	TGS1	99	79.487	Equus_caballus
ENSOCUG00000017522	TGS1	71	91.803	ENSEEUG00000001735	TGS1	71	91.803	Erinaceus_europaeus
ENSOCUG00000017522	TGS1	100	77.363	ENSFCAG00000011478	TGS1	100	77.713	Felis_catus
ENSOCUG00000017522	TGS1	88	48.190	ENSFALG00000010249	TGS1	99	49.561	Ficedula_albicollis
ENSOCUG00000017522	TGS1	100	75.556	ENSFDAG00000011405	TGS1	100	75.088	Fukomys_damarensis
ENSOCUG00000017522	TGS1	96	48.523	ENSGALG00000015340	TGS1	97	49.371	Gallus_gallus
ENSOCUG00000017522	TGS1	99	54.382	ENSGAGG00000019590	TGS1	99	55.006	Gopherus_agassizii
ENSOCUG00000017522	TGS1	100	79.673	ENSGGOG00000008624	TGS1	100	79.439	Gorilla_gorilla
ENSOCUG00000017522	TGS1	69	35.105	ENSHBUG00000003518	lyn	67	70.060	Haplochromis_burtoni
ENSOCUG00000017522	TGS1	87	81.944	ENSHGLG00000000284	TGS1	98	81.944	Heterocephalus_glaber_female
ENSOCUG00000017522	TGS1	98	38.256	ENSHCOG00000014161	lyn	98	38.256	Hippocampus_comes
ENSOCUG00000017522	TGS1	76	41.593	ENSIPUG00000002294	tgs1	98	38.392	Ictalurus_punctatus
ENSOCUG00000017522	TGS1	100	77.130	ENSSTOG00000009597	TGS1	100	77.246	Ictidomys_tridecemlineatus
ENSOCUG00000017522	TGS1	99	70.035	ENSJJAG00000016239	Tgs1	100	70.153	Jaculus_jaculus
ENSOCUG00000017522	TGS1	99	37.313	ENSLBEG00000027341	-	98	37.742	Labrus_bergylta
ENSOCUG00000017522	TGS1	99	46.644	ENSLACG00000008074	TGS1	100	47.416	Latimeria_chalumnae
ENSOCUG00000017522	TGS1	99	41.928	ENSLOCG00000005492	lyn	96	45.058	Lepisosteus_oculatus
ENSOCUG00000017522	TGS1	100	73.372	ENSLAFG00000015386	TGS1	100	73.372	Loxodonta_africana
ENSOCUG00000017522	TGS1	100	79.089	ENSMFAG00000029838	TGS1	100	78.738	Macaca_fascicularis
ENSOCUG00000017522	TGS1	100	78.738	ENSMMUG00000005478	TGS1	100	78.505	Macaca_mulatta
ENSOCUG00000017522	TGS1	100	79.322	ENSMNEG00000023719	TGS1	100	78.972	Macaca_nemestrina
ENSOCUG00000017522	TGS1	100	79.322	ENSMLEG00000034807	TGS1	100	79.089	Mandrillus_leucophaeus
ENSOCUG00000017522	TGS1	98	36.674	ENSMAMG00000009542	TGS1	93	40.730	Mastacembelus_armatus
ENSOCUG00000017522	TGS1	77	49.859	ENSMGAG00000010966	TGS1	90	50.354	Meleagris_gallopavo
ENSOCUG00000017522	TGS1	100	73.512	ENSMAUG00000009875	Tgs1	99	73.629	Mesocricetus_auratus
ENSOCUG00000017522	TGS1	100	79.580	ENSMICG00000011199	TGS1	100	79.580	Microcebus_murinus
ENSOCUG00000017522	TGS1	99	72.098	ENSMOCG00000019560	Tgs1	99	72.098	Microtus_ochrogaster
ENSOCUG00000017522	TGS1	86	64.525	ENSMODG00000009174	TGS1	98	64.659	Monodelphis_domestica
ENSOCUG00000017522	TGS1	99	65.202	MGP_CAROLIEiJ_G0025780	-	98	65.202	Mus_caroli
ENSOCUG00000017522	TGS1	99	72.098	MGP_CAROLIEiJ_G0025779	-	99	72.098	Mus_caroli
ENSOCUG00000017522	TGS1	99	72.216	ENSMUSG00000028233	Tgs1	99	71.981	Mus_musculus
ENSOCUG00000017522	TGS1	99	71.813	MGP_PahariEiJ_G0023901	-	99	71.813	Mus_pahari
ENSOCUG00000017522	TGS1	99	65.167	MGP_PahariEiJ_G0023902	-	98	65.167	Mus_pahari
ENSOCUG00000017522	TGS1	58	83.028	MGP_SPRETEiJ_G0026726	-	94	83.105	Mus_spretus
ENSOCUG00000017522	TGS1	99	72.098	MGP_SPRETEiJ_G0026727	-	99	71.864	Mus_spretus
ENSOCUG00000017522	TGS1	93	77.078	ENSMPUG00000010475	TGS1	99	77.708	Mustela_putorius_furo
ENSOCUG00000017522	TGS1	100	76.779	ENSMLUG00000014857	TGS1	100	76.779	Myotis_lucifugus
ENSOCUG00000017522	TGS1	100	74.156	ENSNGAG00000019532	Tgs1	99	73.923	Nannospalax_galili
ENSOCUG00000017522	TGS1	100	79.907	ENSNLEG00000001101	TGS1	100	79.673	Nomascus_leucogenys
ENSOCUG00000017522	TGS1	93	62.250	ENSMEUG00000001697	TGS1	99	62.500	Notamacropus_eugenii
ENSOCUG00000017522	TGS1	91	67.009	ENSODEG00000002948	TGS1	100	67.009	Octodon_degus
ENSOCUG00000017522	TGS1	76	41.916	ENSONIG00000006339	lyn	96	40.111	Oreochromis_niloticus
ENSOCUG00000017522	TGS1	89	60.792	ENSOANG00000021853	TGS1	98	61.274	Ornithorhynchus_anatinus
ENSOCUG00000017522	TGS1	76	40.059	ENSOMEG00000020174	lyn	96	36.417	Oryzias_melastigma
ENSOCUG00000017522	TGS1	100	77.389	ENSOGAG00000012572	TGS1	100	77.389	Otolemur_garnettii
ENSOCUG00000017522	TGS1	100	71.478	ENSOARG00000014613	TGS1	100	71.595	Ovis_aries
ENSOCUG00000017522	TGS1	100	79.206	ENSPPAG00000039058	TGS1	100	78.972	Pan_paniscus
ENSOCUG00000017522	TGS1	100	77.480	ENSPPRG00000000677	TGS1	100	77.480	Panthera_pardus
ENSOCUG00000017522	TGS1	100	77.480	ENSPTIG00000005122	TGS1	100	77.480	Panthera_tigris_altaica
ENSOCUG00000017522	TGS1	100	79.089	ENSPTRG00000020262	TGS1	100	78.855	Pan_troglodytes
ENSOCUG00000017522	TGS1	100	79.206	ENSPANG00000018910	TGS1	100	78.972	Papio_anubis
ENSOCUG00000017522	TGS1	99	53.726	ENSPSIG00000014983	TGS1	100	53.838	Pelodiscus_sinensis
ENSOCUG00000017522	TGS1	100	72.047	ENSPEMG00000007957	Tgs1	99	72.398	Peromyscus_maniculatus_bairdii
ENSOCUG00000017522	TGS1	99	64.931	ENSPCIG00000016232	TGS1	99	64.931	Phascolarctos_cinereus
ENSOCUG00000017522	TGS1	76	38.270	ENSPFOG00000001545	-	99	37.683	Poecilia_formosa
ENSOCUG00000017522	TGS1	91	33.818	ENSPREG00000012261	-	98	33.495	Poecilia_reticulata
ENSOCUG00000017522	TGS1	100	78.972	ENSPPYG00000018597	TGS1	100	78.388	Pongo_abelii
ENSOCUG00000017522	TGS1	100	73.185	ENSPCAG00000000143	TGS1	100	73.068	Procavia_capensis
ENSOCUG00000017522	TGS1	100	79.347	ENSPCOG00000013537	TGS1	100	79.347	Propithecus_coquereli
ENSOCUG00000017522	TGS1	100	73.036	ENSPVAG00000016399	TGS1	100	72.802	Pteropus_vampyrus
ENSOCUG00000017522	TGS1	99	39.229	ENSPNAG00000022249	lyn	99	40.136	Pygocentrus_nattereri
ENSOCUG00000017522	TGS1	99	71.111	ENSRNOG00000008156	Tgs1	99	71.111	Rattus_norvegicus
ENSOCUG00000017522	TGS1	100	76.725	ENSRBIG00000041893	TGS1	100	76.959	Rhinopithecus_bieti
ENSOCUG00000017522	TGS1	100	78.972	ENSRROG00000035127	TGS1	100	78.972	Rhinopithecus_roxellana
ENSOCUG00000017522	TGS1	96	77.384	ENSSBOG00000024469	TGS1	99	77.139	Saimiri_boliviensis_boliviensis
ENSOCUG00000017522	TGS1	99	63.353	ENSSHAG00000012878	TGS1	99	63.857	Sarcophilus_harrisii
ENSOCUG00000017522	TGS1	96	38.680	ENSSFOG00015001308	tgs1	77	43.546	Scleropages_formosus
ENSOCUG00000017522	TGS1	76	40.876	ENSSMAG00000019469	lyn	98	37.670	Scophthalmus_maximus
ENSOCUG00000017522	TGS1	90	69.728	ENSSSCG00000006251	TGS1	98	69.987	Sus_scrofa
ENSOCUG00000017522	TGS1	96	48.980	ENSTGUG00000011050	TGS1	100	49.760	Taeniopygia_guttata
ENSOCUG00000017522	TGS1	54	66.359	ENSTRUG00000009532	lyn	66	66.359	Takifugu_rubripes
ENSOCUG00000017522	TGS1	89	38.284	ENSTNIG00000018133	lyn	99	38.374	Tetraodon_nigroviridis
ENSOCUG00000017522	TGS1	85	98.361	ENSTBEG00000010953	TGS1	85	98.361	Tupaia_belangeri
ENSOCUG00000017522	TGS1	100	68.495	ENSTTRG00000017239	TGS1	100	68.495	Tursiops_truncatus
ENSOCUG00000017522	TGS1	100	78.763	ENSUAMG00000027718	TGS1	100	78.763	Ursus_americanus
ENSOCUG00000017522	TGS1	93	78.086	ENSUMAG00000009761	TGS1	99	78.086	Ursus_maritimus
ENSOCUG00000017522	TGS1	84	66.852	ENSVPAG00000001166	TGS1	88	67.268	Vicugna_pacos
ENSOCUG00000017522	TGS1	93	76.826	ENSVVUG00000017821	TGS1	99	76.826	Vulpes_vulpes
ENSOCUG00000017522	TGS1	99	46.835	ENSXETG00000005648	tgs1	100	46.506	Xenopus_tropicalis