EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000017708 (Gene tree)
Gene ID: 100347618
Gene Symbol: SETD1B
Alias: -
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 20317 bases
Position: chrGL018824:787625-807941
Accession: 29187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000017684	RRM_1	PF00076.22	1.2e-10	1	1
ENSOCUP00000015207	RRM_1	PF00076.22	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000017708	SETD1B-201	5853	-	ENSOCUP00000015207	1842 (aa)	-	G1TE93
ENSOCUT00000023904	SETD1B-202	5544	-	ENSOCUP00000017684	1739 (aa)	-	G1TL40

Gene Model

Click here to download ENSOCUG00000017708's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000017708's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000017708	SETD1B	98	94.539	ENSG00000139718	SETD1B	95	86.381	Homo_sapiens
ENSOCUG00000017708	SETD1B	52	79.217	ENSAMEG00000014455	SETD1B	96	80.448	Ailuropoda_melanoleuca
ENSOCUG00000017708	SETD1B	51	69.595	ENSAPLG00000005217	SETD1B	66	75.328	Anas_platyrhynchos
ENSOCUG00000017708	SETD1B	64	83.236	ENSANAG00000027480	SETD1B	95	81.141	Aotus_nancymaae
ENSOCUG00000017708	SETD1B	50	72.737	ENSBTAG00000004172	SETD1B	91	79.574	Bos_taurus
ENSOCUG00000017708	SETD1B	98	92.662	ENSCJAG00000016930	SETD1B	95	84.645	Callithrix_jacchus
ENSOCUG00000017708	SETD1B	64	93.173	ENSCAFG00020016619	SETD1B	95	78.135	Canis_lupus_dingo
ENSOCUG00000017708	SETD1B	87	93.173	ENSCHIG00000013406	SETD1B	83	84.098	Capra_hircus
ENSOCUG00000017708	SETD1B	91	92.329	ENSTSYG00000033777	SETD1B	96	92.737	Carlito_syrichta
ENSOCUG00000017708	SETD1B	98	93.345	ENSCCAG00000031928	SETD1B	95	84.645	Cebus_capucinus
ENSOCUG00000017708	SETD1B	100	80.878	ENSCATG00000035803	SETD1B	95	82.296	Cercocebus_atys
ENSOCUG00000017708	SETD1B	88	78.567	ENSCSAG00000002187	SETD1B	92	79.803	Chlorocebus_sabaeus
ENSOCUG00000017708	SETD1B	70	60.496	ENSCPBG00000026067	SETD1B	67	74.165	Chrysemys_picta_bellii
ENSOCUG00000017708	SETD1B	89	90.690	ENSCANG00000023445	SETD1B	94	93.086	Colobus_angolensis_palliatus
ENSOCUG00000017708	SETD1B	76	93.333	ENSCGRG00001013241	Setd1b	96	79.232	Cricetulus_griseus_chok1gshd
ENSOCUG00000017708	SETD1B	66	96.899	ENSCGRG00000018075	Setd1b	94	96.899	Cricetulus_griseus_crigri
ENSOCUG00000017708	SETD1B	98	89.322	ENSDNOG00000035084	SETD1B	98	75.282	Dasypus_novemcinctus
ENSOCUG00000017708	SETD1B	96	91.837	ENSEASG00005012369	SETD1B	95	82.308	Equus_asinus_asinus
ENSOCUG00000017708	SETD1B	78	92.007	ENSECAG00000006549	SETD1B	95	84.897	Equus_caballus
ENSOCUG00000017708	SETD1B	64	85.472	ENSFCAG00000013185	SETD1B	95	81.325	Felis_catus
ENSOCUG00000017708	SETD1B	68	62.044	ENSFALG00000009136	SETD1B	67	76.169	Ficedula_albicollis
ENSOCUG00000017708	SETD1B	93	89.031	ENSFDAG00000015120	SETD1B	97	79.193	Fukomys_damarensis
ENSOCUG00000017708	SETD1B	69	61.360	ENSGALG00000004324	SETD1B	67	76.063	Gallus_gallus
ENSOCUG00000017708	SETD1B	85	59.106	ENSGAFG00000008712	setd1ba	62	71.392	Gambusia_affinis
ENSOCUG00000017708	SETD1B	69	80.805	ENSGACG00000017002	setd1ba	50	80.000	Gasterosteus_aculeatus
ENSOCUG00000017708	SETD1B	68	61.650	ENSGAGG00000025013	SETD1B	69	73.407	Gopherus_agassizii
ENSOCUG00000017708	SETD1B	56	70.297	ENSGGOG00000016052	SETD1A	54	70.033	Gorilla_gorilla
ENSOCUG00000017708	SETD1B	55	96.467	ENSGGOG00000006715	SETD1B	96	96.712	Gorilla_gorilla
ENSOCUG00000017708	SETD1B	64	93.894	ENSHGLG00000012063	SETD1B	98	75.717	Heterocephalus_glaber_female
ENSOCUG00000017708	SETD1B	69	77.910	ENSHCOG00000001951	setd1ba	67	77.515	Hippocampus_comes
ENSOCUG00000017708	SETD1B	74	78.221	ENSLBEG00000020113	setd1ba	60	78.221	Labrus_bergylta
ENSOCUG00000017708	SETD1B	69	59.064	ENSLACG00000018379	SETD1B	68	71.523	Latimeria_chalumnae
ENSOCUG00000017708	SETD1B	91	94.671	ENSLAFG00000026518	SETD1B	93	88.648	Loxodonta_africana
ENSOCUG00000017708	SETD1B	100	79.134	ENSMFAG00000030930	SETD1B	95	83.113	Macaca_fascicularis
ENSOCUG00000017708	SETD1B	64	82.653	ENSMMUG00000012842	SETD1B	95	81.307	Macaca_mulatta
ENSOCUG00000017708	SETD1B	100	82.554	ENSMNEG00000014228	SETD1B	95	92.593	Macaca_nemestrina
ENSOCUG00000017708	SETD1B	100	76.343	ENSMLEG00000039573	SETD1B	95	81.863	Mandrillus_leucophaeus
ENSOCUG00000017708	SETD1B	65	62.500	ENSMGAG00000004421	SETD1B	69	74.273	Meleagris_gallopavo
ENSOCUG00000017708	SETD1B	64	83.152	ENSMICG00000001152	SETD1B	95	85.561	Microcebus_murinus
ENSOCUG00000017708	SETD1B	98	91.624	MGP_CAROLIEiJ_G0027720	Setd1b	96	77.871	Mus_caroli
ENSOCUG00000017708	SETD1B	98	91.966	ENSMUSG00000038384	Setd1b	96	78.384	Mus_musculus
ENSOCUG00000017708	SETD1B	76	91.126	MGP_PahariEiJ_G0024300	Setd1b	96	78.354	Mus_pahari
ENSOCUG00000017708	SETD1B	50	72.295	ENSMPUG00000002053	SETD1B	93	76.481	Mustela_putorius_furo
ENSOCUG00000017708	SETD1B	83	96.739	ENSNLEG00000001254	SETD1B	96	93.217	Nomascus_leucogenys
ENSOCUG00000017708	SETD1B	74	91.966	ENSODEG00000010155	SETD1B	92	86.763	Octodon_degus
ENSOCUG00000017708	SETD1B	98	94.007	ENSOGAG00000034809	SETD1B	95	81.190	Otolemur_garnettii
ENSOCUG00000017708	SETD1B	100	81.655	ENSPPAG00000043308	SETD1B	95	83.025	Pan_paniscus
ENSOCUG00000017708	SETD1B	67	95.291	ENSPPRG00000021041	SETD1B	94	95.342	Panthera_pardus
ENSOCUG00000017708	SETD1B	98	94.369	ENSPTRG00000005567	SETD1B	95	86.055	Pan_troglodytes
ENSOCUG00000017708	SETD1B	98	94.048	ENSPANG00000014784	SETD1B	95	83.042	Papio_anubis
ENSOCUG00000017708	SETD1B	67	60.794	ENSPKIG00000023115	setd1ba	78	60.709	Paramormyrops_kingsleyae
ENSOCUG00000017708	SETD1B	83	68.396	ENSPCIG00000028605	SETD1B	83	68.868	Phascolarctos_cinereus
ENSOCUG00000017708	SETD1B	98	94.710	ENSPCOG00000003246	SETD1B	95	86.371	Propithecus_coquereli
ENSOCUG00000017708	SETD1B	100	81.943	ENSRBIG00000034516	SETD1B	95	83.763	Rhinopithecus_bieti
ENSOCUG00000017708	SETD1B	100	80.952	ENSRROG00000011844	SETD1B	95	83.096	Rhinopithecus_roxellana
ENSOCUG00000017708	SETD1B	95	93.262	ENSSBOG00000033322	SETD1B	100	92.376	Saimiri_boliviensis_boliviensis
ENSOCUG00000017708	SETD1B	52	86.379	ENSSFOG00015004814	SETD1B	63	81.763	Scleropages_formosus
ENSOCUG00000017708	SETD1B	69	59.772	ENSSPUG00000011847	SETD1B	67	68.559	Sphenodon_punctatus
ENSOCUG00000017708	SETD1B	88	80.492	ENSSSCG00000009806	SETD1B	90	80.912	Sus_scrofa
ENSOCUG00000017708	SETD1B	71	61.130	ENSTGUG00000006093	-	67	76.392	Taeniopygia_guttata
ENSOCUG00000017708	SETD1B	97	88.411	ENSUAMG00000008729	SETD1B	93	88.380	Ursus_americanus
ENSOCUG00000017708	SETD1B	64	78.358	ENSVVUG00000016690	SETD1B	95	82.911	Vulpes_vulpes
ENSOCUG00000017708	SETD1B	73	53.936	ENSXETG00000003760	setd1b	70	72.662	Xenopus_tropicalis
ENSOCUG00000017708	SETD1B	85	59.635	ENSXMAG00000014097	setd1ba	79	59.359	Xiphophorus_maculatus