EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000017820 (Gene tree)
Gene ID: 100347336
Gene Symbol: PARP1
Alias: -
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 44161 bases
Position: chr16:48369136-48413296
Accession: 100347336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000015305	PARP	PF00644.20	2.5e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000017822	PARP1-201	3045	XM_008268352	ENSOCUP00000015305	1014 (aa)	XP_008266574	G1TEI0

Gene Model

Click here to download ENSOCUG00000017820's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03410	Base excision repair	KEGG
ocu04210	Apoptosis	KEGG
ocu04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000017820's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000017820	PARP1	51	42.722	ENSOCUG00000002303	PARP2	91	42.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000017820	PARP1	100	94.286	ENSG00000143799	PARP1	100	94.286	Homo_sapiens
ENSOCUG00000017820	PARP1	100	71.484	ENSAPOG00000006414	parp1	100	70.801	Acanthochromis_polyacanthus
ENSOCUG00000017820	PARP1	99	91.650	ENSAMEG00000014451	PARP1	100	91.650	Ailuropoda_melanoleuca
ENSOCUG00000017820	PARP1	100	70.617	ENSACIG00000005651	parp1	100	70.079	Amphilophus_citrinellus
ENSOCUG00000017820	PARP1	100	71.973	ENSAOCG00000021005	parp1	100	71.191	Amphiprion_ocellaris
ENSOCUG00000017820	PARP1	100	71.973	ENSAPEG00000004784	parp1	100	71.094	Amphiprion_percula
ENSOCUG00000017820	PARP1	99	71.415	ENSATEG00000010457	parp1	99	70.530	Anabas_testudineus
ENSOCUG00000017820	PARP1	87	81.158	ENSAPLG00000014039	PARP1	100	80.817	Anas_platyrhynchos
ENSOCUG00000017820	PARP1	100	76.847	ENSACAG00000006189	PARP1	100	76.749	Anolis_carolinensis
ENSOCUG00000017820	PARP1	100	94.187	ENSANAG00000032699	PARP1	100	94.187	Aotus_nancymaae
ENSOCUG00000017820	PARP1	100	72.075	ENSACLG00000015489	parp1	100	71.878	Astatotilapia_calliptera
ENSOCUG00000017820	PARP1	100	69.883	ENSAMXG00000006465	parp1	100	70.078	Astyanax_mexicanus
ENSOCUG00000017820	PARP1	100	90.177	ENSBTAG00000000837	PARP1	100	90.177	Bos_taurus
ENSOCUG00000017820	PARP1	83	43.912	WBGene00004049	parp-1	100	46.360	Caenorhabditis_elegans
ENSOCUG00000017820	PARP1	100	94.187	ENSCJAG00000012831	PARP1	100	94.187	Callithrix_jacchus
ENSOCUG00000017820	PARP1	96	93.422	ENSCAFG00000016089	PARP1	100	93.422	Canis_familiaris
ENSOCUG00000017820	PARP1	100	93.596	ENSCAFG00020001660	PARP1	100	93.596	Canis_lupus_dingo
ENSOCUG00000017820	PARP1	100	90.373	ENSCHIG00000018072	PARP1	100	90.373	Capra_hircus
ENSOCUG00000017820	PARP1	99	94.022	ENSTSYG00000003699	PARP1	100	93.913	Carlito_syrichta
ENSOCUG00000017820	PARP1	99	77.482	ENSCAPG00000011113	-	98	76.970	Cavia_aperea
ENSOCUG00000017820	PARP1	100	92.020	ENSCPOG00000015643	-	100	91.626	Cavia_porcellus
ENSOCUG00000017820	PARP1	100	94.286	ENSCCAG00000033484	PARP1	100	94.286	Cebus_capucinus
ENSOCUG00000017820	PARP1	100	94.187	ENSCATG00000038981	PARP1	100	94.187	Cercocebus_atys
ENSOCUG00000017820	PARP1	100	91.527	ENSCLAG00000006637	PARP1	100	91.527	Chinchilla_lanigera
ENSOCUG00000017820	PARP1	66	97.656	ENSCHOG00000003539	PARP1	66	97.656	Choloepus_hoffmanni
ENSOCUG00000017820	PARP1	100	80.433	ENSCPBG00000011958	PARP1	100	80.039	Chrysemys_picta_bellii
ENSOCUG00000017820	PARP1	99	93.436	ENSCANG00000041340	PARP1	100	93.436	Colobus_angolensis_palliatus
ENSOCUG00000017820	PARP1	100	92.709	ENSCGRG00001020559	Parp1	100	92.709	Cricetulus_griseus_chok1gshd
ENSOCUG00000017820	PARP1	99	92.718	ENSCGRG00000004864	Parp1	100	92.718	Cricetulus_griseus_crigri
ENSOCUG00000017820	PARP1	100	69.854	ENSCSEG00000020665	parp1	99	77.935	Cynoglossus_semilaevis
ENSOCUG00000017820	PARP1	99	70.111	ENSCVAG00000021372	parp1	99	69.777	Cyprinodon_variegatus
ENSOCUG00000017820	PARP1	100	70.732	ENSDARG00000019529	parp1	100	71.065	Danio_rerio
ENSOCUG00000017820	PARP1	96	90.236	ENSDNOG00000012059	PARP1	100	90.236	Dasypus_novemcinctus
ENSOCUG00000017820	PARP1	99	90.359	ENSDORG00000005234	Parp1	100	90.359	Dipodomys_ordii
ENSOCUG00000017820	PARP1	99	41.740	FBgn0010247	Parp	99	41.487	Drosophila_melanogaster
ENSOCUG00000017820	PARP1	87	98.438	ENSETEG00000013254	PARP1	88	98.438	Echinops_telfairi
ENSOCUG00000017820	PARP1	99	58.149	ENSEBUG00000005820	parp1	100	57.847	Eptatretus_burgeri
ENSOCUG00000017820	PARP1	98	94.584	ENSEASG00005013275	PARP1	99	94.489	Equus_asinus_asinus
ENSOCUG00000017820	PARP1	100	94.778	ENSECAG00000019207	PARP1	100	94.778	Equus_caballus
ENSOCUG00000017820	PARP1	100	88.016	ENSEEUG00000012253	PARP1	100	88.016	Erinaceus_europaeus
ENSOCUG00000017820	PARP1	99	71.354	ENSELUG00000017336	parp1	100	70.472	Esox_lucius
ENSOCUG00000017820	PARP1	97	91.335	ENSFCAG00000005777	PARP1	100	91.335	Felis_catus
ENSOCUG00000017820	PARP1	99	78.813	ENSFALG00000011578	PARP1	100	78.710	Ficedula_albicollis
ENSOCUG00000017820	PARP1	99	90.974	ENSFDAG00000017662	PARP1	100	90.974	Fukomys_damarensis
ENSOCUG00000017820	PARP1	99	70.617	ENSFHEG00000001117	parp1	99	70.029	Fundulus_heteroclitus
ENSOCUG00000017820	PARP1	99	70.276	ENSGMOG00000014929	parp1	99	70.010	Gadus_morhua
ENSOCUG00000017820	PARP1	100	79.253	ENSGALG00000009228	PARP1	100	79.646	Gallus_gallus
ENSOCUG00000017820	PARP1	100	70.479	ENSGAFG00000010450	parp1	100	69.795	Gambusia_affinis
ENSOCUG00000017820	PARP1	100	69.472	ENSGACG00000011280	parp1	99	69.253	Gasterosteus_aculeatus
ENSOCUG00000017820	PARP1	100	79.626	ENSGAGG00000010066	PARP1	100	79.331	Gopherus_agassizii
ENSOCUG00000017820	PARP1	100	94.089	ENSGGOG00000006308	PARP1	100	94.089	Gorilla_gorilla
ENSOCUG00000017820	PARP1	100	71.945	ENSHBUG00000010490	parp1	100	71.261	Haplochromis_burtoni
ENSOCUG00000017820	PARP1	96	90.881	ENSHGLG00000003992	PARP1	93	90.369	Heterocephalus_glaber_female
ENSOCUG00000017820	PARP1	99	90.881	ENSHGLG00100016965	PARP1	93	90.369	Heterocephalus_glaber_male
ENSOCUG00000017820	PARP1	100	69.493	ENSHCOG00000011619	parp1	100	69.298	Hippocampus_comes
ENSOCUG00000017820	PARP1	100	69.738	ENSIPUG00000020250	parp1	99	69.854	Ictalurus_punctatus
ENSOCUG00000017820	PARP1	100	94.286	ENSSTOG00000016000	PARP1	100	94.286	Ictidomys_tridecemlineatus
ENSOCUG00000017820	PARP1	100	91.043	ENSJJAG00000023497	Parp1	100	91.043	Jaculus_jaculus
ENSOCUG00000017820	PARP1	100	71.317	ENSKMAG00000011627	parp1	100	71.094	Kryptolebias_marmoratus
ENSOCUG00000017820	PARP1	100	71.722	ENSLBEG00000013376	parp1	100	71.331	Labrus_bergylta
ENSOCUG00000017820	PARP1	99	58.766	ENSLACG00000002735	PARP1	100	59.220	Latimeria_chalumnae
ENSOCUG00000017820	PARP1	100	72.798	ENSLOCG00000015798	parp1	100	73.627	Lepisosteus_oculatus
ENSOCUG00000017820	PARP1	99	90.359	ENSLAFG00000007830	PARP1	100	90.359	Loxodonta_africana
ENSOCUG00000017820	PARP1	100	94.089	ENSMFAG00000002526	PARP1	100	94.089	Macaca_fascicularis
ENSOCUG00000017820	PARP1	100	94.187	ENSMMUG00000021820	PARP1	100	94.187	Macaca_mulatta
ENSOCUG00000017820	PARP1	100	94.187	ENSMNEG00000034074	PARP1	100	94.187	Macaca_nemestrina
ENSOCUG00000017820	PARP1	100	92.043	ENSMLEG00000012344	PARP1	100	92.043	Mandrillus_leucophaeus
ENSOCUG00000017820	PARP1	100	72.031	ENSMAMG00000020652	parp1	100	72.031	Mastacembelus_armatus
ENSOCUG00000017820	PARP1	100	72.141	ENSMZEG00005016907	parp1	100	71.457	Maylandia_zebra
ENSOCUG00000017820	PARP1	99	79.324	ENSMGAG00000007760	PARP1	100	79.222	Meleagris_gallopavo
ENSOCUG00000017820	PARP1	100	92.315	ENSMAUG00000008306	Parp1	100	92.315	Mesocricetus_auratus
ENSOCUG00000017820	PARP1	100	89.852	ENSMICG00000017076	PARP1	100	89.852	Microcebus_murinus
ENSOCUG00000017820	PARP1	100	91.921	ENSMOCG00000014315	Parp1	100	91.921	Microtus_ochrogaster
ENSOCUG00000017820	PARP1	100	70.254	ENSMMOG00000015966	parp1	100	70.069	Mola_mola
ENSOCUG00000017820	PARP1	100	82.596	ENSMODG00000006076	PARP1	100	83.792	Monodelphis_domestica
ENSOCUG00000017820	PARP1	100	69.178	ENSMALG00000004057	parp1	100	68.622	Monopterus_albus
ENSOCUG00000017820	PARP1	100	91.634	MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	Mus_caroli
ENSOCUG00000017820	PARP1	100	91.634	ENSMUSG00000026496	Parp1	99	96.939	Mus_musculus
ENSOCUG00000017820	PARP1	100	91.634	MGP_SPRETEiJ_G0015777	Parp1	100	96.939	Mus_spretus
ENSOCUG00000017820	PARP1	100	91.823	ENSMPUG00000004585	PARP1	100	91.232	Mustela_putorius_furo
ENSOCUG00000017820	PARP1	90	74.945	ENSMLUG00000012285	PARP1	83	90.805	Myotis_lucifugus
ENSOCUG00000017820	PARP1	100	91.921	ENSNGAG00000003885	Parp1	100	92.315	Nannospalax_galili
ENSOCUG00000017820	PARP1	100	71.878	ENSNBRG00000017434	parp1	100	71.681	Neolamprologus_brichardi
ENSOCUG00000017820	PARP1	100	86.588	ENSNLEG00000013905	PARP1	100	86.588	Nomascus_leucogenys
ENSOCUG00000017820	PARP1	67	91.343	ENSMEUG00000007720	PARP1	87	91.343	Notamacropus_eugenii
ENSOCUG00000017820	PARP1	100	94.680	ENSOPRG00000011722	PARP1	100	94.680	Ochotona_princeps
ENSOCUG00000017820	PARP1	100	88.768	ENSODEG00000007424	PARP1	100	88.768	Octodon_degus
ENSOCUG00000017820	PARP1	100	72.043	ENSONIG00000013486	parp1	100	71.359	Oreochromis_niloticus
ENSOCUG00000017820	PARP1	99	82.395	ENSOANG00000001488	PARP1	100	83.009	Ornithorhynchus_anatinus
ENSOCUG00000017820	PARP1	100	70.870	ENSORLG00000013691	parp1	100	70.186	Oryzias_latipes
ENSOCUG00000017820	PARP1	99	70.303	ENSORLG00020001074	parp1	99	69.596	Oryzias_latipes_hni
ENSOCUG00000017820	PARP1	100	70.968	ENSORLG00015007090	parp1	100	70.283	Oryzias_latipes_hsok
ENSOCUG00000017820	PARP1	100	92.709	ENSOGAG00000016206	PARP1	100	92.709	Otolemur_garnettii
ENSOCUG00000017820	PARP1	100	90.766	ENSOARG00000000811	PARP1	100	90.766	Ovis_aries
ENSOCUG00000017820	PARP1	100	93.892	ENSPPAG00000040862	PARP1	100	93.892	Pan_paniscus
ENSOCUG00000017820	PARP1	96	91.385	ENSPPRG00000003528	PARP1	100	91.282	Panthera_pardus
ENSOCUG00000017820	PARP1	93	77.731	ENSPTIG00000009102	PARP1	98	77.731	Panthera_tigris_altaica
ENSOCUG00000017820	PARP1	100	93.892	ENSPTRG00000002049	PARP1	100	93.892	Pan_troglodytes
ENSOCUG00000017820	PARP1	100	94.291	ENSPANG00000011198	PARP1	100	94.291	Papio_anubis
ENSOCUG00000017820	PARP1	100	71.050	ENSPKIG00000006039	parp1	100	71.050	Paramormyrops_kingsleyae
ENSOCUG00000017820	PARP1	99	78.593	ENSPSIG00000016374	PARP1	100	79.082	Pelodiscus_sinensis
ENSOCUG00000017820	PARP1	100	67.283	ENSPMGG00000008936	parp1	100	66.699	Periophthalmus_magnuspinnatus
ENSOCUG00000017820	PARP1	100	92.118	ENSPEMG00000020230	Parp1	100	92.118	Peromyscus_maniculatus_bairdii
ENSOCUG00000017820	PARP1	100	83.186	ENSPCIG00000006436	PARP1	100	86.136	Phascolarctos_cinereus
ENSOCUG00000017820	PARP1	99	70.600	ENSPFOG00000002342	parp1	99	69.715	Poecilia_formosa
ENSOCUG00000017820	PARP1	99	71.091	ENSPLAG00000000909	parp1	99	70.698	Poecilia_latipinna
ENSOCUG00000017820	PARP1	99	71.386	ENSPMEG00000013979	parp1	99	70.600	Poecilia_mexicana
ENSOCUG00000017820	PARP1	99	71.288	ENSPREG00000001114	parp1	99	70.403	Poecilia_reticulata
ENSOCUG00000017820	PARP1	99	94.450	ENSPPYG00000000164	PARP1	100	94.450	Pongo_abelii
ENSOCUG00000017820	PARP1	65	94.753	ENSPCAG00000005558	-	65	94.753	Procavia_capensis
ENSOCUG00000017820	PARP1	100	93.399	ENSPCOG00000016918	PARP1	100	93.399	Propithecus_coquereli
ENSOCUG00000017820	PARP1	92	94.340	ENSPVAG00000005543	PARP1	92	94.340	Pteropus_vampyrus
ENSOCUG00000017820	PARP1	100	72.075	ENSPNYG00000009702	parp1	100	71.878	Pundamilia_nyererei
ENSOCUG00000017820	PARP1	100	71.304	ENSPNAG00000002787	parp1	100	71.304	Pygocentrus_nattereri
ENSOCUG00000017820	PARP1	100	91.929	ENSRNOG00000003084	Parp1	100	91.634	Rattus_norvegicus
ENSOCUG00000017820	PARP1	100	93.892	ENSRBIG00000044893	PARP1	100	93.892	Rhinopithecus_bieti
ENSOCUG00000017820	PARP1	100	93.892	ENSRROG00000029280	PARP1	100	93.892	Rhinopithecus_roxellana
ENSOCUG00000017820	PARP1	100	65.782	ENSRROG00000040615	-	100	68.370	Rhinopithecus_roxellana
ENSOCUG00000017820	PARP1	100	94.089	ENSSBOG00000010144	PARP1	100	94.089	Saimiri_boliviensis_boliviensis
ENSOCUG00000017820	PARP1	99	83.282	ENSSHAG00000001991	PARP1	100	83.811	Sarcophilus_harrisii
ENSOCUG00000017820	PARP1	100	71.707	ENSSFOG00015020017	parp1	100	71.220	Scleropages_formosus
ENSOCUG00000017820	PARP1	100	71.554	ENSSMAG00000013799	parp1	100	70.870	Scophthalmus_maximus
ENSOCUG00000017820	PARP1	100	70.772	ENSSDUG00000016626	parp1	100	69.892	Seriola_dumerili
ENSOCUG00000017820	PARP1	100	70.772	ENSSLDG00000006384	parp1	100	69.892	Seriola_lalandi_dorsalis
ENSOCUG00000017820	PARP1	53	95.833	ENSSARG00000009436	-	59	95.833	Sorex_araneus
ENSOCUG00000017820	PARP1	100	75.369	ENSSPUG00000007790	PARP1	100	75.468	Sphenodon_punctatus
ENSOCUG00000017820	PARP1	100	69.833	ENSSPAG00000019074	parp1	100	70.394	Stegastes_partitus
ENSOCUG00000017820	PARP1	100	93.005	ENSSSCG00000023660	PARP1	100	93.005	Sus_scrofa
ENSOCUG00000017820	PARP1	98	79.911	ENSTGUG00000004260	-	100	79.467	Taeniopygia_guttata
ENSOCUG00000017820	PARP1	100	70.519	ENSTRUG00000014490	parp1	100	70.519	Takifugu_rubripes
ENSOCUG00000017820	PARP1	100	70.078	ENSTNIG00000016384	parp1	100	69.883	Tetraodon_nigroviridis
ENSOCUG00000017820	PARP1	82	96.809	ENSTBEG00000002364	PARP1	92	96.809	Tupaia_belangeri
ENSOCUG00000017820	PARP1	100	88.276	ENSTTRG00000000188	PARP1	100	88.276	Tursiops_truncatus
ENSOCUG00000017820	PARP1	99	92.418	ENSUAMG00000014388	PARP1	100	92.418	Ursus_americanus
ENSOCUG00000017820	PARP1	96	82.787	ENSUMAG00000014555	PARP1	99	82.787	Ursus_maritimus
ENSOCUG00000017820	PARP1	84	96.471	ENSVPAG00000011411	PARP1	84	96.471	Vicugna_pacos
ENSOCUG00000017820	PARP1	96	93.320	ENSVVUG00000001655	PARP1	100	93.320	Vulpes_vulpes
ENSOCUG00000017820	PARP1	98	73.154	ENSXETG00000022610	parp1	99	73.547	Xenopus_tropicalis
ENSOCUG00000017820	PARP1	99	70.305	ENSXMAG00000003632	parp1	99	69.518	Xiphophorus_maculatus