EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000020918 (Gene tree)
Gene ID: 100345128
Gene Symbol: RAVER1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 13236 bases
Position: chrGL018833:64007-77242
Accession: 30296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000021513	RRM_1	PF00076.22	1.7e-28	1	3
ENSOCUP00000021513	RRM_1	PF00076.22	1.7e-28	2	3
ENSOCUP00000021513	RRM_1	PF00076.22	1.7e-28	3	3
ENSOCUP00000019422	RRM_1	PF00076.22	2.2e-28	1	3
ENSOCUP00000019422	RRM_1	PF00076.22	2.2e-28	2	3
ENSOCUP00000019422	RRM_1	PF00076.22	2.2e-28	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000030371	RAVER1-201	2241	-	ENSOCUP00000019422	747 (aa)	-	G1TQX5
ENSOCUT00000030794	RAVER1-202	2127	-	ENSOCUP00000021513	708 (aa)	-	G1TWR6

Gene Model

Click here to download ENSOCUG00000020918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000020918's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000020918	RAVER1	66	44.000	ENSOCUG00000006221	RAVER2	51	56.410

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000020918	RAVER1	100	85.450	ENSG00000161847	RAVER1	93	95.506	Homo_sapiens
ENSOCUG00000020918	RAVER1	76	57.143	ENSAPOG00000017267	raver1	73	57.143	Acanthochromis_polyacanthus
ENSOCUG00000020918	RAVER1	100	83.509	ENSAMEG00000011738	RAVER1	100	82.322	Ailuropoda_melanoleuca
ENSOCUG00000020918	RAVER1	68	56.746	ENSAOCG00000005128	raver1	89	49.580	Amphiprion_ocellaris
ENSOCUG00000020918	RAVER1	79	61.039	ENSAPEG00000010854	raver1	84	61.039	Amphiprion_percula
ENSOCUG00000020918	RAVER1	97	50.211	ENSATEG00000021004	raver1	91	49.725	Anabas_testudineus
ENSOCUG00000020918	RAVER1	83	55.608	ENSACAG00000008386	-	94	56.573	Anolis_carolinensis
ENSOCUG00000020918	RAVER1	100	83.355	ENSANAG00000028226	RAVER1	100	84.808	Aotus_nancymaae
ENSOCUG00000020918	RAVER1	73	85.417	ENSACLG00000018492	raver1	75	85.417	Astatotilapia_calliptera
ENSOCUG00000020918	RAVER1	80	78.333	ENSAMXG00000005132	raver1	86	73.611	Astyanax_mexicanus
ENSOCUG00000020918	RAVER1	95	89.294	ENSBTAG00000015721	RAVER1	100	91.589	Bos_taurus
ENSOCUG00000020918	RAVER1	100	83.223	ENSCJAG00000005671	RAVER1	100	84.676	Callithrix_jacchus
ENSOCUG00000020918	RAVER1	100	83.400	ENSCAFG00000017861	RAVER1	100	83.798	Canis_familiaris
ENSOCUG00000020918	RAVER1	100	81.818	ENSCAFG00020024449	RAVER1	100	83.424	Canis_lupus_dingo
ENSOCUG00000020918	RAVER1	98	80.972	ENSCHIG00000006718	RAVER1	100	81.781	Capra_hircus
ENSOCUG00000020918	RAVER1	91	77.246	ENSTSYG00000027107	RAVER1	91	89.848	Carlito_syrichta
ENSOCUG00000020918	RAVER1	99	71.622	ENSCAPG00000002269	RAVER1	100	78.261	Cavia_aperea
ENSOCUG00000020918	RAVER1	98	82.568	ENSCPOG00000001008	RAVER1	100	82.838	Cavia_porcellus
ENSOCUG00000020918	RAVER1	100	83.333	ENSCCAG00000031723	RAVER1	100	84.788	Cebus_capucinus
ENSOCUG00000020918	RAVER1	100	84.259	ENSCATG00000043863	RAVER1	100	85.450	Cercocebus_atys
ENSOCUG00000020918	RAVER1	98	83.962	ENSCLAG00000009336	RAVER1	100	83.288	Chinchilla_lanigera
ENSOCUG00000020918	RAVER1	100	84.259	ENSCSAG00000007317	RAVER1	86	85.450	Chlorocebus_sabaeus
ENSOCUG00000020918	RAVER1	96	58.259	ENSCPBG00000005349	-	96	59.487	Chrysemys_picta_bellii
ENSOCUG00000020918	RAVER1	100	84.656	ENSCANG00000008337	RAVER1	100	85.847	Colobus_angolensis_palliatus
ENSOCUG00000020918	RAVER1	100	81.806	ENSCGRG00001013260	-	100	83.019	Cricetulus_griseus_chok1gshd
ENSOCUG00000020918	RAVER1	100	81.806	ENSCGRG00000015138	-	100	83.019	Cricetulus_griseus_crigri
ENSOCUG00000020918	RAVER1	75	78.846	ENSCSEG00000021092	raver1	79	78.846	Cynoglossus_semilaevis
ENSOCUG00000020918	RAVER1	97	49.930	ENSCVAG00000013971	raver1	92	50.211	Cyprinodon_variegatus
ENSOCUG00000020918	RAVER1	77	64.198	ENSDARG00000052617	raver1	91	50.774	Danio_rerio
ENSOCUG00000020918	RAVER1	76	84.459	ENSDNOG00000035742	-	77	86.207	Dasypus_novemcinctus
ENSOCUG00000020918	RAVER1	100	75.497	ENSDORG00000010106	-	100	76.923	Dipodomys_ordii
ENSOCUG00000020918	RAVER1	56	86.802	ENSETEG00000008201	-	75	86.802	Echinops_telfairi
ENSOCUG00000020918	RAVER1	65	93.797	ENSEASG00005010544	-	91	91.811	Equus_asinus_asinus
ENSOCUG00000020918	RAVER1	100	86.016	ENSECAG00000024966	RAVER1	100	86.807	Equus_caballus
ENSOCUG00000020918	RAVER1	97	50.070	ENSELUG00000023287	raver1	93	50.813	Esox_lucius
ENSOCUG00000020918	RAVER1	100	84.960	ENSFCAG00000009435	RAVER1	100	83.905	Felis_catus
ENSOCUG00000020918	RAVER1	98	83.962	ENSFDAG00000015113	RAVER1	100	83.558	Fukomys_damarensis
ENSOCUG00000020918	RAVER1	96	50.904	ENSGMOG00000003649	raver1	68	57.906	Gadus_morhua
ENSOCUG00000020918	RAVER1	66	45.010	ENSGALG00000050608	-	53	44.533	Gallus_gallus
ENSOCUG00000020918	RAVER1	100	50.067	ENSGAFG00000015944	raver1	96	50.000	Gambusia_affinis
ENSOCUG00000020918	RAVER1	50	64.305	ENSGACG00000013818	raver1	99	48.677	Gasterosteus_aculeatus
ENSOCUG00000020918	RAVER1	79	76.232	ENSGAGG00000011748	-	96	74.151	Gopherus_agassizii
ENSOCUG00000020918	RAVER1	100	85.185	ENSGGOG00000006015	RAVER1	100	84.921	Gorilla_gorilla
ENSOCUG00000020918	RAVER1	71	82.353	ENSHBUG00000021210	raver1	75	82.353	Haplochromis_burtoni
ENSOCUG00000020918	RAVER1	98	84.211	ENSHGLG00000015460	RAVER1	100	83.671	Heterocephalus_glaber_female
ENSOCUG00000020918	RAVER1	98	84.211	ENSHGLG00100000812	RAVER1	100	83.671	Heterocephalus_glaber_male
ENSOCUG00000020918	RAVER1	98	50.205	ENSHCOG00000000449	raver1	91	50.068	Hippocampus_comes
ENSOCUG00000020918	RAVER1	97	52.580	ENSIPUG00000013153	raver1	90	56.863	Ictalurus_punctatus
ENSOCUG00000020918	RAVER1	100	83.087	ENSSTOG00000003241	RAVER1	100	85.811	Ictidomys_tridecemlineatus
ENSOCUG00000020918	RAVER1	100	82.392	ENSJJAG00000018219	-	100	83.468	Jaculus_jaculus
ENSOCUG00000020918	RAVER1	98	50.067	ENSKMAG00000017355	raver1	82	56.805	Kryptolebias_marmoratus
ENSOCUG00000020918	RAVER1	89	48.550	ENSLBEG00000008268	raver1	70	56.262	Labrus_bergylta
ENSOCUG00000020918	RAVER1	90	56.484	ENSLACG00000005809	-	99	57.266	Latimeria_chalumnae
ENSOCUG00000020918	RAVER1	96	51.682	ENSLOCG00000007500	raver1	94	51.262	Lepisosteus_oculatus
ENSOCUG00000020918	RAVER1	98	83.941	ENSLAFG00000003664	-	97	95.000	Loxodonta_africana
ENSOCUG00000020918	RAVER1	100	83.730	ENSMFAG00000037977	RAVER1	100	84.921	Macaca_fascicularis
ENSOCUG00000020918	RAVER1	100	83.995	ENSMMUG00000014897	RAVER1	100	85.185	Macaca_mulatta
ENSOCUG00000020918	RAVER1	100	83.995	ENSMNEG00000028390	RAVER1	100	85.185	Macaca_nemestrina
ENSOCUG00000020918	RAVER1	100	84.127	ENSMLEG00000041959	RAVER1	100	85.317	Mandrillus_leucophaeus
ENSOCUG00000020918	RAVER1	76	77.358	ENSMAMG00000012059	raver1	93	50.070	Mastacembelus_armatus
ENSOCUG00000020918	RAVER1	73	85.417	ENSMZEG00005019002	raver1	75	85.417	Maylandia_zebra
ENSOCUG00000020918	RAVER1	100	81.183	ENSMAUG00000017948	-	100	82.527	Mesocricetus_auratus
ENSOCUG00000020918	RAVER1	99	83.378	ENSMICG00000010326	RAVER1	99	83.644	Microcebus_murinus
ENSOCUG00000020918	RAVER1	100	81.806	ENSMOCG00000015553	-	100	82.884	Microtus_ochrogaster
ENSOCUG00000020918	RAVER1	98	48.963	ENSMMOG00000012093	raver1	93	47.983	Mola_mola
ENSOCUG00000020918	RAVER1	96	71.175	ENSMODG00000005584	-	91	70.285	Monodelphis_domestica
ENSOCUG00000020918	RAVER1	98	48.904	ENSMALG00000016569	raver1	80	57.086	Monopterus_albus
ENSOCUG00000020918	RAVER1	98	81.818	MGP_CAROLIEiJ_G0031860	-	100	81.283	Mus_caroli
ENSOCUG00000020918	RAVER1	98	82.353	ENSMUSG00000010205	Raver1	100	81.818	Mus_musculus
ENSOCUG00000020918	RAVER1	98	81.516	MGP_PahariEiJ_G0014726	-	100	81.782	Mus_pahari
ENSOCUG00000020918	RAVER1	98	82.219	MGP_SPRETEiJ_G0032984	-	100	81.684	Mus_spretus
ENSOCUG00000020918	RAVER1	100	85.092	ENSMPUG00000006712	RAVER1	100	84.037	Mustela_putorius_furo
ENSOCUG00000020918	RAVER1	98	82.201	ENSMLUG00000012328	RAVER1	100	82.745	Myotis_lucifugus
ENSOCUG00000020918	RAVER1	98	82.950	ENSNGAG00000001260	-	100	82.409	Nannospalax_galili
ENSOCUG00000020918	RAVER1	66	50.412	ENSNBRG00000010139	raver1	65	52.156	Neolamprologus_brichardi
ENSOCUG00000020918	RAVER1	100	83.862	ENSNLEG00000012181	RAVER1	100	85.053	Nomascus_leucogenys
ENSOCUG00000020918	RAVER1	90	67.916	ENSMEUG00000003281	-	100	69.208	Notamacropus_eugenii
ENSOCUG00000020918	RAVER1	52	83.730	ENSOPRG00000005855	-	51	85.156	Ochotona_princeps
ENSOCUG00000020918	RAVER1	98	83.423	ENSODEG00000016260	RAVER1	100	83.558	Octodon_degus
ENSOCUG00000020918	RAVER1	94	50.980	ENSONIG00000001559	raver1	88	58.418	Oreochromis_niloticus
ENSOCUG00000020918	RAVER1	71	64.736	ENSORLG00000005458	raver1	71	62.843	Oryzias_latipes
ENSOCUG00000020918	RAVER1	77	60.274	ENSORLG00020004392	raver1	70	64.987	Oryzias_latipes_hni
ENSOCUG00000020918	RAVER1	77	60.046	ENSORLG00015017222	raver1	67	64.736	Oryzias_latipes_hsok
ENSOCUG00000020918	RAVER1	73	81.633	ENSOMEG00000023956	raver1	80	81.633	Oryzias_melastigma
ENSOCUG00000020918	RAVER1	100	84.748	ENSOGAG00000011071	RAVER1	100	84.615	Otolemur_garnettii
ENSOCUG00000020918	RAVER1	100	81.374	ENSOARG00000015886	RAVER1	100	81.506	Ovis_aries
ENSOCUG00000020918	RAVER1	100	85.450	ENSPPAG00000002611	RAVER1	100	85.185	Pan_paniscus
ENSOCUG00000020918	RAVER1	100	85.224	ENSPPRG00000009912	RAVER1	100	84.169	Panthera_pardus
ENSOCUG00000020918	RAVER1	100	85.450	ENSPTRG00000010466	RAVER1	100	85.185	Pan_troglodytes
ENSOCUG00000020918	RAVER1	100	84.392	ENSPANG00000004122	RAVER1	100	85.582	Papio_anubis
ENSOCUG00000020918	RAVER1	100	81.292	ENSPEMG00000016411	-	100	82.100	Peromyscus_maniculatus_bairdii
ENSOCUG00000020918	RAVER1	100	71.486	ENSPCIG00000018695	-	99	76.136	Phascolarctos_cinereus
ENSOCUG00000020918	RAVER1	97	50.621	ENSPFOG00000007016	raver1	92	50.621	Poecilia_formosa
ENSOCUG00000020918	RAVER1	97	47.196	ENSPLAG00000020793	raver1	83	56.250	Poecilia_latipinna
ENSOCUG00000020918	RAVER1	97	51.179	ENSPMEG00000011220	raver1	71	73.214	Poecilia_mexicana
ENSOCUG00000020918	RAVER1	73	88.372	ENSPREG00000006864	raver1	78	88.372	Poecilia_reticulata
ENSOCUG00000020918	RAVER1	100	83.862	ENSPPYG00000010514	RAVER1	85	85.317	Pongo_abelii
ENSOCUG00000020918	RAVER1	100	84.474	ENSPCOG00000026605	RAVER1	100	84.605	Propithecus_coquereli
ENSOCUG00000020918	RAVER1	98	85.054	ENSPVAG00000003689	RAVER1	100	84.647	Pteropus_vampyrus
ENSOCUG00000020918	RAVER1	63	82.353	ENSPNYG00000013284	raver1	66	82.353	Pundamilia_nyererei
ENSOCUG00000020918	RAVER1	96	50.070	ENSPNAG00000015476	raver1	99	48.903	Pygocentrus_nattereri
ENSOCUG00000020918	RAVER1	100	80.481	ENSRNOG00000020710	Raver1	100	81.417	Rattus_norvegicus
ENSOCUG00000020918	RAVER1	100	85.317	ENSRBIG00000034702	RAVER1	100	85.317	Rhinopithecus_bieti
ENSOCUG00000020918	RAVER1	100	82.672	ENSRROG00000031186	RAVER1	100	83.024	Rhinopithecus_roxellana
ENSOCUG00000020918	RAVER1	100	82.228	ENSSBOG00000023423	RAVER1	100	82.891	Saimiri_boliviensis_boliviensis
ENSOCUG00000020918	RAVER1	90	69.701	ENSSHAG00000008181	-	90	70.833	Sarcophilus_harrisii
ENSOCUG00000020918	RAVER1	98	49.309	ENSSMAG00000004546	raver1	93	49.311	Scophthalmus_maximus
ENSOCUG00000020918	RAVER1	97	50.487	ENSSDUG00000021063	raver1	82	61.039	Seriola_dumerili
ENSOCUG00000020918	RAVER1	97	50.070	ENSSLDG00000014505	raver1	92	49.512	Seriola_lalandi_dorsalis
ENSOCUG00000020918	RAVER1	97	49.728	ENSSPAG00000000688	raver1	84	55.932	Stegastes_partitus
ENSOCUG00000020918	RAVER1	100	84.788	ENSSSCG00000013650	-	100	85.582	Sus_scrofa
ENSOCUG00000020918	RAVER1	98	49.174	ENSTRUG00000025641	raver1	80	55.372	Takifugu_rubripes
ENSOCUG00000020918	RAVER1	98	84.532	ENSTTRG00000009552	RAVER1	100	84.803	Tursiops_truncatus
ENSOCUG00000020918	RAVER1	100	85.356	ENSUAMG00000020385	RAVER1	100	84.169	Ursus_americanus
ENSOCUG00000020918	RAVER1	100	83.533	ENSVVUG00000028976	RAVER1	100	83.931	Vulpes_vulpes
ENSOCUG00000020918	RAVER1	100	52.737	ENSXETG00000011622	raver1	100	53.175	Xenopus_tropicalis
ENSOCUG00000020918	RAVER1	99	50.206	ENSXCOG00000016368	raver1	94	50.271	Xiphophorus_couchianus
ENSOCUG00000020918	RAVER1	99	50.137	ENSXMAG00000000217	raver1	94	50.474	Xiphophorus_maculatus