EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000021154 (Gene tree)
Gene ID: 100008656
Gene Symbol: -
Alias: -
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 59430 bases
Position: chr2:92808860-92868289
Accession: 100008656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000019672	IF-2	PF11987.8	2.5e-19	1	1
ENSOCUP00000026193	IF-2	PF11987.8	3e-19	1	1
ENSOCUP00000019672	GTP_EFTU	PF00009.27	8.1e-35	1	1
ENSOCUP00000026193	GTP_EFTU	PF00009.27	8.7e-35	1	1
ENSOCUP00000019672	MMR_HSR1	PF01926.23	3.1e-07	1	1
ENSOCUP00000026193	MMR_HSR1	PF01926.23	3.6e-07	1	1
ENSOCUP00000019672	GTP_EFTU_D2	PF03144.25	1.5e-09	1	1
ENSOCUP00000026193	GTP_EFTU_D2	PF03144.25	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000033144	-	3891	-	ENSOCUP00000026193	1263 (aa)	-	U3KLT5
ENSOCUT00000028121	-	4214	XM_008254682	ENSOCUP00000019672	1209 (aa)	XP_008252904	G1TRL5

Gene Model

Click here to download ENSOCUG00000021154's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000021154's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000021154	-	73	77.427	ENSAPOG00000004375	eif5b	96	68.228	Acanthochromis_polyacanthus
ENSOCUG00000021154	-	69	77.686	ENSACIG00000024324	eif5b	61	87.138	Amphilophus_citrinellus
ENSOCUG00000021154	-	82	74.251	ENSAOCG00000018386	eif5b	52	87.460	Amphiprion_ocellaris
ENSOCUG00000021154	-	73	78.153	ENSATEG00000006765	eif5b	50	87.942	Anabas_testudineus
ENSOCUG00000021154	-	51	87.942	ENSATEG00000011259	eif5b	63	87.942	Anabas_testudineus
ENSOCUG00000021154	-	100	79.542	ENSACAG00000008305	-	99	79.140	Anolis_carolinensis
ENSOCUG00000021154	-	51	87.621	ENSACLG00000005530	eif5b	64	87.621	Astatotilapia_calliptera
ENSOCUG00000021154	-	73	79.599	ENSAMXG00000018383	eif5b	89	71.377	Astyanax_mexicanus
ENSOCUG00000021154	-	51	56.752	WBGene00021857	iffb-1	58	56.752	Caenorhabditis_elegans
ENSOCUG00000021154	-	98	88.543	ENSCJAG00000009960	-	98	89.532	Callithrix_jacchus
ENSOCUG00000021154	-	99	86.462	ENSCAPG00000014619	-	98	85.366	Cavia_aperea
ENSOCUG00000021154	-	100	92.175	ENSCPOG00000011967	-	99	91.089	Cavia_porcellus
ENSOCUG00000021154	-	58	79.053	ENSCHOG00000002137	-	68	79.197	Choloepus_hoffmanni
ENSOCUG00000021154	-	51	65.696	ENSCSAVG00000008808	-	66	65.696	Ciona_savignyi
ENSOCUG00000021154	-	51	88.264	ENSCSEG00000014153	eif5b	51	88.264	Cynoglossus_semilaevis
ENSOCUG00000021154	-	51	70.799	FBgn0026259	eIF5B	54	70.799	Drosophila_melanogaster
ENSOCUG00000021154	-	59	100.000	ENSEEUG00000001093	-	59	100.000	Erinaceus_europaeus
ENSOCUG00000021154	-	51	87.722	ENSELUG00000001132	eif5b	58	87.722	Esox_lucius
ENSOCUG00000021154	-	68	84.084	ENSGMOG00000002031	eif5b	72	71.267	Gadus_morhua
ENSOCUG00000021154	-	56	80.861	ENSGACG00000010536	eif5b	85	85.507	Gasterosteus_aculeatus
ENSOCUG00000021154	-	54	94.207	ENSGAGG00000022242	-	97	94.082	Gopherus_agassizii
ENSOCUG00000021154	-	73	77.227	ENSHBUG00000023319	eif5b	93	87.621	Haplochromis_burtoni
ENSOCUG00000021154	-	51	86.817	ENSHCOG00000002807	eif5b	52	86.817	Hippocampus_comes
ENSOCUG00000021154	-	95	68.052	ENSIPUG00000020910	eif5b	99	67.208	Ictalurus_punctatus
ENSOCUG00000021154	-	73	77.232	ENSKMAG00000004325	eif5b	99	67.938	Kryptolebias_marmoratus
ENSOCUG00000021154	-	100	72.392	ENSLACG00000011688	eif5b	100	71.636	Latimeria_chalumnae
ENSOCUG00000021154	-	51	86.817	ENSMAMG00000022568	eif5b	93	81.833	Mastacembelus_armatus
ENSOCUG00000021154	-	73	77.227	ENSMZEG00005012696	eif5b	93	87.621	Maylandia_zebra
ENSOCUG00000021154	-	100	82.372	ENSMODG00000001387	-	100	82.619	Monodelphis_domestica
ENSOCUG00000021154	-	82	74.026	ENSMALG00000005862	eif5b	99	65.964	Monopterus_albus
ENSOCUG00000021154	-	84	74.379	ENSNBRG00000021912	eif5b	93	65.385	Neolamprologus_brichardi
ENSOCUG00000021154	-	81	97.552	ENSMEUG00000007080	-	82	97.552	Notamacropus_eugenii
ENSOCUG00000021154	-	73	76.550	ENSONIG00000018749	eif5b	89	69.763	Oreochromis_niloticus
ENSOCUG00000021154	-	100	79.390	ENSOANG00000004621	-	99	78.531	Ornithorhynchus_anatinus
ENSOCUG00000021154	-	73	76.689	ENSORLG00000001525	eif5b	52	87.138	Oryzias_latipes
ENSOCUG00000021154	-	73	76.802	ENSORLG00020005327	eif5b	53	87.299	Oryzias_latipes_hni
ENSOCUG00000021154	-	73	77.088	ENSORLG00015008949	eif5b	53	87.138	Oryzias_latipes_hsok
ENSOCUG00000021154	-	66	76.161	ENSOMEG00000016539	eif5b	79	87.138	Oryzias_melastigma
ENSOCUG00000021154	-	73	76.957	ENSPKIG00000011133	eif5b	99	66.233	Paramormyrops_kingsleyae
ENSOCUG00000021154	-	57	86.790	ENSPSIG00000014914	-	93	85.154	Pelodiscus_sinensis
ENSOCUG00000021154	-	74	65.286	ENSPMAG00000004508	eif5b	73	65.494	Petromyzon_marinus
ENSOCUG00000021154	-	61	79.865	ENSPFOG00000007543	eif5b	90	87.478	Poecilia_formosa
ENSOCUG00000021154	-	73	79.640	ENSPLAG00000015913	eif5b	99	68.104	Poecilia_latipinna
ENSOCUG00000021154	-	73	79.120	ENSPMEG00000006712	eif5b	99	69.048	Poecilia_mexicana
ENSOCUG00000021154	-	71	95.714	ENSPCAG00000007829	-	71	95.714	Procavia_capensis
ENSOCUG00000021154	-	99	92.556	ENSPCOG00000019508	-	100	99.678	Propithecus_coquereli
ENSOCUG00000021154	-	90	98.026	ENSPVAG00000006592	-	93	86.393	Pteropus_vampyrus
ENSOCUG00000021154	-	73	74.887	ENSPNYG00000021051	eif5b	90	86.699	Pundamilia_nyererei
ENSOCUG00000021154	-	73	78.771	ENSPNAG00000023852	eif5b	51	89.550	Pygocentrus_nattereri
ENSOCUG00000021154	-	51	88.585	ENSSFOG00015000594	eif5b	51	88.585	Scleropages_formosus
ENSOCUG00000021154	-	70	75.118	ENSSMAG00000000045	eif5b	61	85.048	Scophthalmus_maximus
ENSOCUG00000021154	-	69	78.504	ENSSDUG00000005847	eif5b	80	77.927	Seriola_dumerili
ENSOCUG00000021154	-	69	78.504	ENSSLDG00000013738	eif5b	62	87.299	Seriola_lalandi_dorsalis
ENSOCUG00000021154	-	78	82.797	ENSSPAG00000005335	eif5b	61	82.797	Stegastes_partitus
ENSOCUG00000021154	-	75	72.380	ENSTNIG00000006580	eif5b	95	74.273	Tetraodon_nigroviridis
ENSOCUG00000021154	-	75	100.000	ENSTBEG00000009133	-	79	100.000	Tupaia_belangeri
ENSOCUG00000021154	-	100	70.000	ENSXETG00000019377	eif5b	99	69.576	Xenopus_tropicalis
ENSOCUG00000021154	-	73	75.393	ENSXCOG00000016681	eif5b	94	75.141	Xiphophorus_couchianus
ENSOCUG00000021154	-	73	75.788	ENSXMAG00000001002	eif5b	94	75.197	Xiphophorus_maculatus