EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000021456 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 878 bases
Position: chr12:38446907-38447784
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000016003	LSM	PF01423.22	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000023735	-	726	-	ENSOCUP00000016003	241 (aa)	-	G1TGF3

Gene Model

Click here to download ENSOCUG00000021456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000021456's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000021456	-	88	86.916	ENSOCUG00000003532	-	90	86.574
ENSOCUG00000021456	-	88	71.090	ENSOCUG00000026813	-	90	71.090
ENSOCUG00000021456	-	74	91.061	ENSOCUG00000022423	-	86	94.048
ENSOCUG00000021456	-	88	93.897	ENSOCUG00000028215	-	90	93.953
ENSOCUG00000021456	-	78	96.296	ENSOCUG00000014042	-	90	95.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000021456	-	78	95.767	ENSG00000125835	SNRPB	93	94.884	Homo_sapiens
ENSOCUG00000021456	-	75	88.950	ENSAPOG00000019606	snrpb	73	87.558	Acanthochromis_polyacanthus
ENSOCUG00000021456	-	78	95.745	ENSAMEG00000011353	SNRPB	88	94.860	Ailuropoda_melanoleuca
ENSOCUG00000021456	-	73	88.571	ENSACIG00000014480	snrpb	92	87.204	Amphilophus_citrinellus
ENSOCUG00000021456	-	75	88.950	ENSAOCG00000006876	snrpb	89	87.558	Amphiprion_ocellaris
ENSOCUG00000021456	-	75	88.950	ENSAPEG00000021585	snrpb	92	87.558	Amphiprion_percula
ENSOCUG00000021456	-	75	88.398	ENSATEG00000009836	snrpb	89	86.636	Anabas_testudineus
ENSOCUG00000021456	-	75	91.160	ENSACAG00000002053	SNRPB	89	89.855	Anolis_carolinensis
ENSOCUG00000021456	-	78	95.767	ENSANAG00000024443	-	93	94.884	Aotus_nancymaae
ENSOCUG00000021456	-	89	86.916	ENSANAG00000020364	-	54	85.514	Aotus_nancymaae
ENSOCUG00000021456	-	96	89.177	ENSANAG00000036271	-	86	89.202	Aotus_nancymaae
ENSOCUG00000021456	-	75	88.950	ENSACLG00000014707	snrpb	89	87.558	Astatotilapia_calliptera
ENSOCUG00000021456	-	76	89.617	ENSAMXG00000029434	snrpb	90	89.767	Astyanax_mexicanus
ENSOCUG00000021456	-	91	85.068	ENSBTAG00000001038	SNRPB	93	95.349	Bos_taurus
ENSOCUG00000021456	-	78	95.767	ENSCJAG00000020971	-	93	94.884	Callithrix_jacchus
ENSOCUG00000021456	-	89	88.785	ENSCJAG00000023097	-	90	88.837	Callithrix_jacchus
ENSOCUG00000021456	-	78	95.767	ENSCAFG00000006693	-	93	94.884	Canis_familiaris
ENSOCUG00000021456	-	78	84.211	ENSCAFG00000031109	-	84	82.090	Canis_familiaris
ENSOCUG00000021456	-	78	95.767	ENSCAFG00020016981	-	90	94.884	Canis_lupus_dingo
ENSOCUG00000021456	-	78	96.296	ENSCHIG00000025449	-	93	95.349	Capra_hircus
ENSOCUG00000021456	-	93	72.889	ENSTSYG00000032303	-	79	73.023	Carlito_syrichta
ENSOCUG00000021456	-	78	95.767	ENSTSYG00000014498	-	93	94.884	Carlito_syrichta
ENSOCUG00000021456	-	78	95.745	ENSCAPG00000012669	SNRPB	93	94.860	Cavia_aperea
ENSOCUG00000021456	-	78	95.767	ENSCPOG00000039408	SNRPB	93	94.884	Cavia_porcellus
ENSOCUG00000021456	-	78	95.767	ENSCCAG00000026002	SNRPB	93	94.884	Cebus_capucinus
ENSOCUG00000021456	-	53	85.827	ENSCCAG00000035140	-	89	84.314	Cebus_capucinus
ENSOCUG00000021456	-	78	95.767	ENSCATG00000030230	SNRPB	93	94.884	Cercocebus_atys
ENSOCUG00000021456	-	78	95.767	ENSCLAG00000012442	SNRPB	91	94.884	Chinchilla_lanigera
ENSOCUG00000021456	-	78	95.767	ENSCSAG00000010840	SNRPB	93	94.884	Chlorocebus_sabaeus
ENSOCUG00000021456	-	78	92.593	ENSCPBG00000026801	SNRPB	93	91.163	Chrysemys_picta_bellii
ENSOCUG00000021456	-	78	95.767	ENSCANG00000019461	SNRPB	93	94.884	Colobus_angolensis_palliatus
ENSOCUG00000021456	-	78	95.767	ENSCGRG00001023046	Snrpb	93	94.884	Cricetulus_griseus_chok1gshd
ENSOCUG00000021456	-	75	95.580	ENSCGRG00000010423	Snrpb	92	94.686	Cricetulus_griseus_crigri
ENSOCUG00000021456	-	76	87.978	ENSCSEG00000020328	snrpb	89	88.372	Cynoglossus_semilaevis
ENSOCUG00000021456	-	70	89.286	ENSDARG00000011125	snrpb	89	89.767	Danio_rerio
ENSOCUG00000021456	-	78	91.005	ENSDNOG00000007896	-	88	90.698	Dasypus_novemcinctus
ENSOCUG00000021456	-	78	95.767	ENSDNOG00000015545	-	90	94.884	Dasypus_novemcinctus
ENSOCUG00000021456	-	76	96.175	ENSDORG00000029558	Snrpb	91	95.215	Dipodomys_ordii
ENSOCUG00000021456	-	62	67.785	FBgn0262601	SmB	74	67.785	Drosophila_melanogaster
ENSOCUG00000021456	-	76	76.503	ENSETEG00000006830	SNRPB	94	78.605	Echinops_telfairi
ENSOCUG00000021456	-	77	75.806	ENSEBUG00000007467	SNRPB	89	73.636	Eptatretus_burgeri
ENSOCUG00000021456	-	78	95.238	ENSEASG00005012991	SNRPB	93	94.419	Equus_asinus_asinus
ENSOCUG00000021456	-	78	95.767	ENSECAG00000011944	SNRPB	93	94.884	Equus_caballus
ENSOCUG00000021456	-	78	95.767	ENSEEUG00000015568	SNRPB	76	94.884	Erinaceus_europaeus
ENSOCUG00000021456	-	60	91.724	ENSELUG00000014564	snrpb	92	87.081	Esox_lucius
ENSOCUG00000021456	-	78	95.767	ENSFCAG00000034090	-	93	94.884	Felis_catus
ENSOCUG00000021456	-	75	91.713	ENSFALG00000004866	SNRPB	89	90.338	Ficedula_albicollis
ENSOCUG00000021456	-	78	95.767	ENSFDAG00000009937	SNRPB	93	94.884	Fukomys_damarensis
ENSOCUG00000021456	-	78	92.063	ENSGALG00000035421	SNRPN	90	90.698	Gallus_gallus
ENSOCUG00000021456	-	71	89.412	ENSGAFG00000019558	snrpb	93	84.722	Gambusia_affinis
ENSOCUG00000021456	-	76	86.885	ENSGACG00000003262	snrpb	89	87.442	Gasterosteus_aculeatus
ENSOCUG00000021456	-	78	92.593	ENSGAGG00000001308	SNRPB	90	91.163	Gopherus_agassizii
ENSOCUG00000021456	-	78	95.767	ENSGGOG00000016138	SNRPB	93	94.884	Gorilla_gorilla
ENSOCUG00000021456	-	75	88.950	ENSHBUG00000008369	snrpb	89	87.558	Haplochromis_burtoni
ENSOCUG00000021456	-	78	95.767	ENSHGLG00000016241	-	93	94.884	Heterocephalus_glaber_female
ENSOCUG00000021456	-	62	86.000	ENSHGLG00000016505	-	72	86.000	Heterocephalus_glaber_female
ENSOCUG00000021456	-	62	86.000	ENSHGLG00100004178	-	72	86.000	Heterocephalus_glaber_male
ENSOCUG00000021456	-	78	95.767	ENSHGLG00100012877	-	93	94.884	Heterocephalus_glaber_male
ENSOCUG00000021456	-	76	87.978	ENSHCOG00000014888	snrpb	89	88.372	Hippocampus_comes
ENSOCUG00000021456	-	70	89.286	ENSIPUG00000024569	SNRPB	89	89.767	Ictalurus_punctatus
ENSOCUG00000021456	-	90	78.341	ENSSTOG00000027821	-	88	75.829	Ictidomys_tridecemlineatus
ENSOCUG00000021456	-	88	92.891	ENSSTOG00000033664	-	90	93.023	Ictidomys_tridecemlineatus
ENSOCUG00000021456	-	78	95.767	ENSJJAG00000024170	Snrpb	93	94.884	Jaculus_jaculus
ENSOCUG00000021456	-	71	90.643	ENSKMAG00000014494	snrpb	88	87.097	Kryptolebias_marmoratus
ENSOCUG00000021456	-	76	87.978	ENSLBEG00000005678	snrpb	89	88.372	Labrus_bergylta
ENSOCUG00000021456	-	78	88.889	ENSLACG00000011459	SNRPB	90	87.907	Latimeria_chalumnae
ENSOCUG00000021456	-	70	90.476	ENSLOCG00000002687	snrpb	89	90.233	Lepisosteus_oculatus
ENSOCUG00000021456	-	78	92.021	ENSLAFG00000017588	SNRPB	92	91.589	Loxodonta_africana
ENSOCUG00000021456	-	78	95.767	ENSMFAG00000038756	SNRPB	93	94.884	Macaca_fascicularis
ENSOCUG00000021456	-	78	95.767	ENSMMUG00000010050	SNRPB	93	94.884	Macaca_mulatta
ENSOCUG00000021456	-	78	95.767	ENSMNEG00000027954	SNRPB	93	94.884	Macaca_nemestrina
ENSOCUG00000021456	-	78	95.767	ENSMLEG00000022346	SNRPB	93	94.884	Mandrillus_leucophaeus
ENSOCUG00000021456	-	75	88.889	ENSMAMG00000009294	snrpb	87	87.500	Mastacembelus_armatus
ENSOCUG00000021456	-	75	88.950	ENSMZEG00005011856	snrpb	89	87.558	Maylandia_zebra
ENSOCUG00000021456	-	78	96.296	ENSMICG00000016519	SNRPB	93	95.349	Microcebus_murinus
ENSOCUG00000021456	-	78	86.772	ENSMICG00000015983	-	94	86.408	Microcebus_murinus
ENSOCUG00000021456	-	78	95.238	ENSMOCG00000002892	-	93	94.419	Microtus_ochrogaster
ENSOCUG00000021456	-	58	77.698	ENSMOCG00000021362	-	92	76.279	Microtus_ochrogaster
ENSOCUG00000021456	-	76	88.462	ENSMMOG00000013226	snrpb	91	88.318	Mola_mola
ENSOCUG00000021456	-	75	88.398	ENSMALG00000020839	snrpb	72	86.636	Monopterus_albus
ENSOCUG00000021456	-	78	95.767	MGP_CAROLIEiJ_G0024293	Snrpb	93	94.419	Mus_caroli
ENSOCUG00000021456	-	78	95.767	ENSMUSG00000027404	Snrpb	93	94.419	Mus_musculus
ENSOCUG00000021456	-	78	95.767	MGP_PahariEiJ_G0025738	Snrpb	93	94.419	Mus_pahari
ENSOCUG00000021456	-	78	95.767	MGP_SPRETEiJ_G0025213	Snrpb	93	94.419	Mus_spretus
ENSOCUG00000021456	-	78	95.767	ENSMPUG00000009283	SNRPB	93	94.884	Mustela_putorius_furo
ENSOCUG00000021456	-	78	93.122	ENSMLUG00000016951	SNRPB	89	92.558	Myotis_lucifugus
ENSOCUG00000021456	-	78	95.767	ENSNGAG00000012051	Snrpb	93	94.884	Nannospalax_galili
ENSOCUG00000021456	-	75	86.188	ENSNBRG00000006353	snrpb	80	86.385	Neolamprologus_brichardi
ENSOCUG00000021456	-	78	95.767	ENSNLEG00000029067	SNRPB	90	94.884	Nomascus_leucogenys
ENSOCUG00000021456	-	74	94.413	ENSMEUG00000015625	SNRPB	95	92.056	Notamacropus_eugenii
ENSOCUG00000021456	-	78	95.767	ENSODEG00000004305	-	93	94.884	Octodon_degus
ENSOCUG00000021456	-	78	91.534	ENSODEG00000016060	-	90	90.698	Octodon_degus
ENSOCUG00000021456	-	75	88.950	ENSONIG00000000248	snrpb	89	87.558	Oreochromis_niloticus
ENSOCUG00000021456	-	75	88.398	ENSORLG00000021862	snrpb	89	87.097	Oryzias_latipes
ENSOCUG00000021456	-	78	95.767	ENSOGAG00000016149	SNRPB	90	94.884	Otolemur_garnettii
ENSOCUG00000021456	-	78	96.296	ENSOARG00000006740	SNRPB	93	95.349	Ovis_aries
ENSOCUG00000021456	-	78	95.767	ENSPPAG00000036314	SNRPB	93	94.884	Pan_paniscus
ENSOCUG00000021456	-	78	95.767	ENSPPRG00000003233	-	93	94.884	Panthera_pardus
ENSOCUG00000021456	-	78	95.745	ENSPTIG00000007468	SNRPB	93	94.860	Panthera_tigris_altaica
ENSOCUG00000021456	-	78	95.767	ENSPTRG00000013176	SNRPB	93	94.884	Pan_troglodytes
ENSOCUG00000021456	-	78	95.767	ENSPANG00000020362	SNRPB	90	94.884	Papio_anubis
ENSOCUG00000021456	-	70	88.690	ENSPKIG00000002865	snrpb	89	88.837	Paramormyrops_kingsleyae
ENSOCUG00000021456	-	78	92.553	ENSPSIG00000014125	SNRPB	88	91.121	Pelodiscus_sinensis
ENSOCUG00000021456	-	74	86.517	ENSPMGG00000016349	snrpb	88	85.714	Periophthalmus_magnuspinnatus
ENSOCUG00000021456	-	78	95.767	ENSPEMG00000007948	Snrpb	93	94.884	Peromyscus_maniculatus_bairdii
ENSOCUG00000021456	-	92	92.308	ENSPCIG00000004694	SNRPB	92	92.308	Phascolarctos_cinereus
ENSOCUG00000021456	-	75	72.678	ENSPLAG00000014130	snrpb	88	70.142	Poecilia_latipinna
ENSOCUG00000021456	-	79	73.158	ENSPREG00000015515	snrpb	88	72.038	Poecilia_reticulata
ENSOCUG00000021456	-	78	95.767	ENSPPYG00000010841	SNRPB	93	94.884	Pongo_abelii
ENSOCUG00000021456	-	78	95.767	ENSPCOG00000013686	SNRPB	93	94.884	Propithecus_coquereli
ENSOCUG00000021456	-	78	94.709	ENSPVAG00000017013	SNRPB	75	93.953	Pteropus_vampyrus
ENSOCUG00000021456	-	75	88.950	ENSPNYG00000014788	snrpb	89	87.558	Pundamilia_nyererei
ENSOCUG00000021456	-	76	89.617	ENSPNAG00000016126	snrpb	89	90.233	Pygocentrus_nattereri
ENSOCUG00000021456	-	78	95.767	ENSRNOG00000006961	Snrpb	93	94.884	Rattus_norvegicus
ENSOCUG00000021456	-	70	96.429	ENSRBIG00000040505	SNRPB	93	93.488	Rhinopithecus_bieti
ENSOCUG00000021456	-	78	95.767	ENSRROG00000036094	SNRPB	93	94.884	Rhinopithecus_roxellana
ENSOCUG00000021456	-	78	95.767	ENSSBOG00000027310	SNRPB	93	94.884	Saimiri_boliviensis_boliviensis
ENSOCUG00000021456	-	92	92.793	ENSSHAG00000010394	SNRPB	93	92.793	Sarcophilus_harrisii
ENSOCUG00000021456	-	70	88.690	ENSSFOG00015002870	snrpb	90	88.837	Scleropages_formosus
ENSOCUG00000021456	-	76	87.432	ENSSMAG00000006766	snrpb	89	87.907	Scophthalmus_maximus
ENSOCUG00000021456	-	75	88.950	ENSSDUG00000018539	snrpb	89	87.558	Seriola_dumerili
ENSOCUG00000021456	-	75	88.950	ENSSLDG00000022391	snrpb	89	87.558	Seriola_lalandi_dorsalis
ENSOCUG00000021456	-	78	81.915	ENSSARG00000003084	SNRPB	91	82.710	Sorex_araneus
ENSOCUG00000021456	-	78	92.553	ENSSPUG00000015659	SNRPB	90	91.121	Sphenodon_punctatus
ENSOCUG00000021456	-	75	88.950	ENSSPAG00000021992	snrpb	89	87.558	Stegastes_partitus
ENSOCUG00000021456	-	78	96.296	ENSSSCG00000040857	-	93	95.349	Sus_scrofa
ENSOCUG00000021456	-	95	76.856	ENSSSCG00000011966	-	92	74.884	Sus_scrofa
ENSOCUG00000021456	-	71	78.824	ENSTGUG00000005684	SNRPB	90	75.701	Taeniopygia_guttata
ENSOCUG00000021456	-	76	87.978	ENSTRUG00000023094	snrpb	93	87.907	Takifugu_rubripes
ENSOCUG00000021456	-	76	87.978	ENSTNIG00000002991	snrpb	89	87.907	Tetraodon_nigroviridis
ENSOCUG00000021456	-	75	95.556	ENSUAMG00000005984	-	88	95.628	Ursus_americanus
ENSOCUG00000021456	-	57	94.891	ENSUMAG00000002123	-	90	75.829	Ursus_maritimus
ENSOCUG00000021456	-	90	76.606	ENSVVUG00000010086	-	94	76.744	Vulpes_vulpes
ENSOCUG00000021456	-	78	95.238	ENSVVUG00000025654	-	90	94.419	Vulpes_vulpes
ENSOCUG00000021456	-	78	91.534	ENSXETG00000027266	snrpb	91	90.233	Xenopus_tropicalis