EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000021496 (Gene tree)
Gene ID: 100351754
Gene Symbol: VARS2
Alias: -
Full Name: valine--tRNA ligase%2C mitochondrial
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 21548 bases
Position: chr12:22911448-22932995
Accession: 100351754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000025797	tRNA-synt_1g	PF09334.11	9.9e-13	1	1
ENSOCUP00000025797	Anticodon_1	PF08264.13	5.4e-30	1	1
ENSOCUP00000025797	tRNA-synt_1	PF00133.22	6.8e-157	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000023955	VARS2-201	9020	XM_008262693	ENSOCUP00000025797	1657 (aa)	XP_008260915	G1U8N0

Gene Model

Click here to download ENSOCUG00000021496's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000021496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000021496	VARS2	59	48.574	ENSOCUG00000022463	VARS	80	47.624

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000021496	VARS2	60	49.516	ENSAPOG00000007396	vars2	99	47.890	Acanthochromis_polyacanthus
ENSOCUG00000021496	VARS2	64	78.864	ENSAMEG00000012997	VARS2	97	78.864	Ailuropoda_melanoleuca
ENSOCUG00000021496	VARS2	63	48.183	ENSACIG00000004344	vars2	99	47.623	Amphilophus_citrinellus
ENSOCUG00000021496	VARS2	60	48.500	ENSAOCG00000000476	vars2	99	46.881	Amphiprion_ocellaris
ENSOCUG00000021496	VARS2	60	48.453	ENSAPEG00000008646	vars2	97	46.881	Amphiprion_percula
ENSOCUG00000021496	VARS2	59	50.247	ENSATEG00000012291	vars2	96	49.281	Anabas_testudineus
ENSOCUG00000021496	VARS2	61	55.460	ENSACAG00000022093	VARS2	95	54.938	Anolis_carolinensis
ENSOCUG00000021496	VARS2	64	80.522	ENSANAG00000038018	VARS2	99	80.204	Aotus_nancymaae
ENSOCUG00000021496	VARS2	63	47.970	ENSACLG00000018673	vars2	99	47.417	Astatotilapia_calliptera
ENSOCUG00000021496	VARS2	62	48.327	ENSAMXG00000017773	vars2	97	48.231	Astyanax_mexicanus
ENSOCUG00000021496	VARS2	64	80.168	ENSBTAG00000010698	VARS2	99	79.796	Bos_taurus
ENSOCUG00000021496	VARS2	66	79.034	ENSCJAG00000019826	VARS2	99	79.870	Callithrix_jacchus
ENSOCUG00000021496	VARS2	65	77.727	ENSCAFG00000000454	VARS2	99	78.459	Canis_familiaris
ENSOCUG00000021496	VARS2	56	78.549	ENSCAFG00020019387	VARS2	95	78.466	Canis_lupus_dingo
ENSOCUG00000021496	VARS2	64	80.410	ENSCHIG00000007847	VARS2	99	80.186	Capra_hircus
ENSOCUG00000021496	VARS2	65	79.817	ENSTSYG00000009904	VARS2	99	80.612	Carlito_syrichta
ENSOCUG00000021496	VARS2	56	79.092	ENSCAPG00000017770	VARS2	99	78.986	Cavia_aperea
ENSOCUG00000021496	VARS2	64	79.055	ENSCPOG00000021834	VARS2	99	78.962	Cavia_porcellus
ENSOCUG00000021496	VARS2	65	80.627	ENSCCAG00000037907	VARS2	99	80.576	Cebus_capucinus
ENSOCUG00000021496	VARS2	65	81.499	ENSCATG00000032554	VARS2	99	81.776	Cercocebus_atys
ENSOCUG00000021496	VARS2	64	79.128	ENSCLAG00000002889	VARS2	99	79.128	Chinchilla_lanigera
ENSOCUG00000021496	VARS2	64	81.495	ENSCSAG00000008327	VARS2	99	81.402	Chlorocebus_sabaeus
ENSOCUG00000021496	VARS2	59	57.773	ENSCPBG00000021502	VARS2	96	58.502	Chrysemys_picta_bellii
ENSOCUG00000021496	VARS2	65	81.221	ENSCANG00000014991	VARS2	99	81.204	Colobus_angolensis_palliatus
ENSOCUG00000021496	VARS2	63	77.526	ENSCGRG00001021535	Vars2	99	77.519	Cricetulus_griseus_chok1gshd
ENSOCUG00000021496	VARS2	63	77.526	ENSCGRG00000014112	Vars2	99	77.519	Cricetulus_griseus_crigri
ENSOCUG00000021496	VARS2	52	57.737	ENSCSEG00000015432	vars2	83	57.737	Cynoglossus_semilaevis
ENSOCUG00000021496	VARS2	63	48.048	ENSDARG00000056717	vars2	99	47.770	Danio_rerio
ENSOCUG00000021496	VARS2	51	78.941	ENSDORG00000008516	Vars2	93	78.480	Dipodomys_ordii
ENSOCUG00000021496	VARS2	61	82.670	ENSETEG00000014844	VARS2	94	82.521	Echinops_telfairi
ENSOCUG00000021496	VARS2	65	80.111	ENSEASG00005019997	VARS2	98	79.926	Equus_asinus_asinus
ENSOCUG00000021496	VARS2	64	81.530	ENSECAG00000018202	VARS2	99	81.058	Equus_caballus
ENSOCUG00000021496	VARS2	60	48.936	ENSELUG00000017824	vars2	97	47.765	Esox_lucius
ENSOCUG00000021496	VARS2	64	78.830	ENSFCAG00000010531	VARS2	99	78.830	Felis_catus
ENSOCUG00000021496	VARS2	64	78.406	ENSFDAG00000017216	VARS2	99	78.366	Fukomys_damarensis
ENSOCUG00000021496	VARS2	54	49.227	ENSFHEG00000013932	vars2	93	48.113	Fundulus_heteroclitus
ENSOCUG00000021496	VARS2	57	51.767	ENSGMOG00000018960	vars2	98	51.031	Gadus_morhua
ENSOCUG00000021496	VARS2	51	47.342	ENSGAFG00000004737	vars2	88	46.962	Gambusia_affinis
ENSOCUG00000021496	VARS2	56	51.739	ENSGACG00000001464	vars2	99	50.100	Gasterosteus_aculeatus
ENSOCUG00000021496	VARS2	59	58.243	ENSGAGG00000011652	VARS2	99	58.541	Gopherus_agassizii
ENSOCUG00000021496	VARS2	64	81.699	ENSGGOG00000014587	VARS2	99	81.308	Gorilla_gorilla
ENSOCUG00000021496	VARS2	58	48.998	ENSHBUG00000002448	vars2	95	48.397	Haplochromis_burtoni
ENSOCUG00000021496	VARS2	64	78.189	ENSHGLG00000012886	VARS2	96	77.932	Heterocephalus_glaber_female
ENSOCUG00000021496	VARS2	64	77.974	ENSHGLG00100016535	VARS2	99	77.829	Heterocephalus_glaber_male
ENSOCUG00000021496	VARS2	59	50.148	ENSIPUG00000015573	Vars2	99	48.107	Ictalurus_punctatus
ENSOCUG00000021496	VARS2	64	80.912	ENSSTOG00000009924	VARS2	99	80.538	Ictidomys_tridecemlineatus
ENSOCUG00000021496	VARS2	64	77.201	ENSJJAG00000011144	Vars2	99	77.201	Jaculus_jaculus
ENSOCUG00000021496	VARS2	60	49.031	ENSKMAG00000001393	vars2	96	47.925	Kryptolebias_marmoratus
ENSOCUG00000021496	VARS2	61	48.517	ENSLBEG00000011949	vars2	95	47.943	Labrus_bergylta
ENSOCUG00000021496	VARS2	61	49.618	ENSLACG00000001576	-	99	49.618	Latimeria_chalumnae
ENSOCUG00000021496	VARS2	64	79.401	ENSLAFG00000015183	VARS2	99	79.213	Loxodonta_africana
ENSOCUG00000021496	VARS2	64	81.215	ENSMFAG00000042367	VARS2	99	80.895	Macaca_fascicularis
ENSOCUG00000021496	VARS2	64	81.308	ENSMMUG00000018609	VARS2	99	80.988	Macaca_mulatta
ENSOCUG00000021496	VARS2	64	81.402	ENSMNEG00000043163	VARS2	99	81.081	Macaca_nemestrina
ENSOCUG00000021496	VARS2	65	81.684	ENSMLEG00000041728	VARS2	98	81.591	Mandrillus_leucophaeus
ENSOCUG00000021496	VARS2	61	48.148	ENSMAMG00000020339	vars2	97	47.286	Mastacembelus_armatus
ENSOCUG00000021496	VARS2	63	47.878	ENSMZEG00005017669	vars2	99	47.325	Maylandia_zebra
ENSOCUG00000021496	VARS2	64	78.099	ENSMAUG00000018946	Vars2	99	78.099	Mesocricetus_auratus
ENSOCUG00000021496	VARS2	54	81.416	ENSMICG00000005365	VARS2	100	81.036	Microcebus_murinus
ENSOCUG00000021496	VARS2	60	78.136	ENSMOCG00000014607	Vars2	99	77.672	Microtus_ochrogaster
ENSOCUG00000021496	VARS2	60	48.913	ENSMMOG00000012122	vars2	96	47.610	Mola_mola
ENSOCUG00000021496	VARS2	64	68.236	ENSMODG00000015848	VARS2	99	68.333	Monodelphis_domestica
ENSOCUG00000021496	VARS2	57	51.086	ENSMALG00000009217	vars2	99	47.615	Monopterus_albus
ENSOCUG00000021496	VARS2	64	77.985	MGP_CAROLIEiJ_G0021529	Vars2	93	83.920	Mus_caroli
ENSOCUG00000021496	VARS2	64	77.612	ENSMUSG00000038838	Vars2	99	77.252	Mus_musculus
ENSOCUG00000021496	VARS2	64	77.612	MGP_PahariEiJ_G0020523	Vars2	93	83.417	Mus_pahari
ENSOCUG00000021496	VARS2	64	77.572	MGP_SPRETEiJ_G0022436	Vars2	93	83.920	Mus_spretus
ENSOCUG00000021496	VARS2	64	78.678	ENSMPUG00000011643	VARS2	99	78.678	Mustela_putorius_furo
ENSOCUG00000021496	VARS2	67	76.759	ENSMLUG00000002356	VARS2	99	76.418	Myotis_lucifugus
ENSOCUG00000021496	VARS2	64	71.348	ENSNGAG00000020607	Vars2	99	70.779	Nannospalax_galili
ENSOCUG00000021496	VARS2	65	77.260	ENSNLEG00000005625	VARS2	99	76.839	Nomascus_leucogenys
ENSOCUG00000021496	VARS2	51	67.811	ENSMEUG00000014475	VARS2	90	67.811	Notamacropus_eugenii
ENSOCUG00000021496	VARS2	57	83.628	ENSOPRG00000000682	VARS2	90	83.628	Ochotona_princeps
ENSOCUG00000021496	VARS2	64	77.037	ENSODEG00000017965	VARS2	99	76.994	Octodon_degus
ENSOCUG00000021496	VARS2	59	49.951	ENSORLG00000010632	vars2	97	48.375	Oryzias_latipes
ENSOCUG00000021496	VARS2	60	49.471	ENSORLG00020018584	vars2	96	48.774	Oryzias_latipes_hni
ENSOCUG00000021496	VARS2	60	49.471	ENSORLG00015010408	vars2	96	48.774	Oryzias_latipes_hsok
ENSOCUG00000021496	VARS2	60	50.487	ENSOMEG00000008360	vars2	94	49.904	Oryzias_melastigma
ENSOCUG00000021496	VARS2	65	80.055	ENSOGAG00000006087	VARS2	98	79.743	Otolemur_garnettii
ENSOCUG00000021496	VARS2	64	79.666	ENSOARG00000010844	VARS2	99	79.117	Ovis_aries
ENSOCUG00000021496	VARS2	65	80.497	ENSPPAG00000041141	VARS2	99	81.215	Pan_paniscus
ENSOCUG00000021496	VARS2	65	78.065	ENSPPRG00000006751	VARS2	98	78.065	Panthera_pardus
ENSOCUG00000021496	VARS2	65	77.972	ENSPTIG00000017799	VARS2	98	79.703	Panthera_tigris_altaica
ENSOCUG00000021496	VARS2	65	80.497	ENSPTRG00000034497	VARS2	99	81.215	Pan_troglodytes
ENSOCUG00000021496	VARS2	65	81.591	ENSPANG00000018481	VARS2	100	81.818	Papio_anubis
ENSOCUG00000021496	VARS2	61	50.872	ENSPKIG00000011372	vars2	99	49.723	Paramormyrops_kingsleyae
ENSOCUG00000021496	VARS2	61	49.434	ENSPMGG00000000465	vars2	97	48.799	Periophthalmus_magnuspinnatus
ENSOCUG00000021496	VARS2	64	78.078	ENSPEMG00000014691	Vars2	99	77.809	Peromyscus_maniculatus_bairdii
ENSOCUG00000021496	VARS2	64	70.638	ENSPCIG00000015040	VARS2	99	70.743	Phascolarctos_cinereus
ENSOCUG00000021496	VARS2	59	49.606	ENSPFOG00000017616	vars2	95	48.651	Poecilia_formosa
ENSOCUG00000021496	VARS2	59	49.164	ENSPLAG00000019778	vars2	99	46.984	Poecilia_latipinna
ENSOCUG00000021496	VARS2	59	49.263	ENSPMEG00000011123	vars2	98	46.967	Poecilia_mexicana
ENSOCUG00000021496	VARS2	57	44.590	ENSPREG00000014998	vars2	96	43.093	Poecilia_reticulata
ENSOCUG00000021496	VARS2	64	81.361	ENSPPYG00000016424	VARS2	99	81.267	Pongo_abelii
ENSOCUG00000021496	VARS2	54	78.916	ENSPCAG00000006946	VARS2	84	78.916	Procavia_capensis
ENSOCUG00000021496	VARS2	66	80.346	ENSPCOG00000014839	VARS2	99	80.346	Propithecus_coquereli
ENSOCUG00000021496	VARS2	64	78.785	ENSPVAG00000004197	VARS2	99	78.419	Pteropus_vampyrus
ENSOCUG00000021496	VARS2	51	59.686	ENSPNYG00000010314	vars2	96	59.686	Pundamilia_nyererei
ENSOCUG00000021496	VARS2	63	49.394	ENSPNAG00000026793	vars2	96	49.252	Pygocentrus_nattereri
ENSOCUG00000021496	VARS2	64	77.530	ENSRNOG00000000833	Vars2	99	77.530	Rattus_norvegicus
ENSOCUG00000021496	VARS2	64	81.402	ENSRBIG00000032725	VARS2	99	81.308	Rhinopithecus_bieti
ENSOCUG00000021496	VARS2	61	85.915	ENSRROG00000043847	VARS2	99	81.215	Rhinopithecus_roxellana
ENSOCUG00000021496	VARS2	64	79.799	ENSSBOG00000033240	VARS2	90	84.627	Saimiri_boliviensis_boliviensis
ENSOCUG00000021496	VARS2	64	68.930	ENSSHAG00000009307	VARS2	100	68.837	Sarcophilus_harrisii
ENSOCUG00000021496	VARS2	62	48.958	ENSSFOG00015016187	vars2	96	48.295	Scleropages_formosus
ENSOCUG00000021496	VARS2	59	50.647	ENSSMAG00000020842	vars2	96	49.663	Scophthalmus_maximus
ENSOCUG00000021496	VARS2	60	49.563	ENSSDUG00000011598	vars2	97	48.244	Seriola_dumerili
ENSOCUG00000021496	VARS2	58	50.203	ENSSLDG00000015492	vars2	97	47.610	Seriola_lalandi_dorsalis
ENSOCUG00000021496	VARS2	57	55.508	ENSSPUG00000014700	VARS2	94	55.169	Sphenodon_punctatus
ENSOCUG00000021496	VARS2	57	49.072	ENSSPAG00000004654	vars2	95	47.110	Stegastes_partitus
ENSOCUG00000021496	VARS2	64	80.561	ENSSSCG00000001384	VARS2	99	80.238	Sus_scrofa
ENSOCUG00000021496	VARS2	61	50.245	ENSTRUG00000005264	vars2	98	49.197	Takifugu_rubripes
ENSOCUG00000021496	VARS2	59	50.394	ENSTNIG00000005916	vars2	99	48.485	Tetraodon_nigroviridis
ENSOCUG00000021496	VARS2	59	80.717	ENSTTRG00000012243	VARS2	93	80.717	Tursiops_truncatus
ENSOCUG00000021496	VARS2	58	88.571	ENSUAMG00000026124	VARS2	94	88.571	Ursus_americanus
ENSOCUG00000021496	VARS2	64	79.442	ENSUMAG00000019894	VARS2	99	79.442	Ursus_maritimus
ENSOCUG00000021496	VARS2	65	78.821	ENSVVUG00000010754	VARS2	95	78.690	Vulpes_vulpes
ENSOCUG00000021496	VARS2	58	50.810	ENSXETG00000003036	vars2	99	50.709	Xenopus_tropicalis
ENSOCUG00000021496	VARS2	57	50.938	ENSXCOG00000003455	vars2	97	48.303	Xiphophorus_couchianus
ENSOCUG00000021496	VARS2	59	48.773	ENSXMAG00000013523	vars2	98	46.514	Xiphophorus_maculatus