EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000022463 (Gene tree)
Gene ID: 100353025
Gene Symbol: VARS
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 12274 bases
Position: chr12:20591543-20603816
Accession: 100353025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000021491	Anticodon_1	PF08264.13	9.5e-35	1	1
ENSOCUP00000021491	tRNA-synt_1	PF00133.22	5.9e-202	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000026451	VARS-201	3780	XM_008262599	ENSOCUP00000021491	1259 (aa)	XP_008260821	G1TWP4

Gene Model

Click here to download ENSOCUG00000022463's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000022463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000022463	VARS	80	47.624	ENSOCUG00000021496	VARS2	59	48.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000022463	VARS	100	92.035	ENSG00000204394	VARS	100	96.552	Homo_sapiens
ENSOCUG00000022463	VARS	98	63.285	ENSAPOG00000020921	vars	99	63.043	Acanthochromis_polyacanthus
ENSOCUG00000022463	VARS	98	63.285	ENSAPOG00000020691	vars	99	63.043	Acanthochromis_polyacanthus
ENSOCUG00000022463	VARS	100	91.318	ENSAMEG00000006417	VARS	100	91.081	Ailuropoda_melanoleuca
ENSOCUG00000022463	VARS	100	63.594	ENSACIG00000013752	vars	100	63.780	Amphilophus_citrinellus
ENSOCUG00000022463	VARS	100	63.551	ENSAOCG00000002447	vars	100	63.191	Amphiprion_ocellaris
ENSOCUG00000022463	VARS	100	63.396	ENSAPEG00000010638	vars	99	63.629	Amphiprion_percula
ENSOCUG00000022463	VARS	100	63.162	ENSATEG00000020219	vars	100	63.241	Anabas_testudineus
ENSOCUG00000022463	VARS	90	69.390	ENSACAG00000029133	-	99	69.705	Anolis_carolinensis
ENSOCUG00000022463	VARS	100	92.035	ENSANAG00000015453	VARS	100	92.247	Aotus_nancymaae
ENSOCUG00000022463	VARS	100	62.954	ENSACLG00000025699	vars	97	63.219	Astatotilapia_calliptera
ENSOCUG00000022463	VARS	94	64.975	ENSAMXG00000017716	vars	95	65.159	Astyanax_mexicanus
ENSOCUG00000022463	VARS	100	91.469	ENSBTAG00000005631	VARS	100	91.311	Bos_taurus
ENSOCUG00000022463	VARS	100	92.114	ENSCJAG00000002604	VARS	100	91.956	Callithrix_jacchus
ENSOCUG00000022463	VARS	100	90.758	ENSCAFG00000000636	VARS	100	90.521	Canis_familiaris
ENSOCUG00000022463	VARS	94	90.978	ENSCAFG00020020790	VARS	98	89.218	Canis_lupus_dingo
ENSOCUG00000022463	VARS	100	91.627	ENSCHIG00000011008	VARS	100	91.469	Capra_hircus
ENSOCUG00000022463	VARS	100	91.785	ENSTSYG00000001567	VARS	100	91.627	Carlito_syrichta
ENSOCUG00000022463	VARS	91	88.515	ENSCAPG00000013736	VARS	99	88.515	Cavia_aperea
ENSOCUG00000022463	VARS	100	89.889	ENSCPOG00000000870	VARS	100	89.889	Cavia_porcellus
ENSOCUG00000022463	VARS	100	92.035	ENSCCAG00000035656	VARS	100	94.030	Cebus_capucinus
ENSOCUG00000022463	VARS	100	91.956	ENSCATG00000022394	VARS	100	92.168	Cercocebus_atys
ENSOCUG00000022463	VARS	90	85.860	ENSCLAG00000009470	VARS	95	85.860	Chinchilla_lanigera
ENSOCUG00000022463	VARS	100	92.114	ENSCSAG00000008784	VARS	100	92.114	Chlorocebus_sabaeus
ENSOCUG00000022463	VARS	77	75.154	ENSCPBG00000007943	VARS	96	75.257	Chrysemys_picta_bellii
ENSOCUG00000022463	VARS	100	92.035	ENSCANG00000033570	VARS	100	92.035	Colobus_angolensis_palliatus
ENSOCUG00000022463	VARS	100	90.427	ENSCGRG00001005686	Vars	100	90.427	Cricetulus_griseus_chok1gshd
ENSOCUG00000022463	VARS	92	85.343	ENSCGRG00000013352	Vars	78	85.343	Cricetulus_griseus_crigri
ENSOCUG00000022463	VARS	100	62.421	ENSCSEG00000019652	vars	100	63.333	Cynoglossus_semilaevis
ENSOCUG00000022463	VARS	100	64.065	ENSCVAG00000022398	vars	100	64.308	Cyprinodon_variegatus
ENSOCUG00000022463	VARS	100	63.454	ENSDARG00000044575	vars	100	64.125	Danio_rerio
ENSOCUG00000022463	VARS	79	94.034	ENSDORG00000016433	Vars	89	93.851	Dipodomys_ordii
ENSOCUG00000022463	VARS	68	87.342	ENSETEG00000003824	VARS	76	87.342	Echinops_telfairi
ENSOCUG00000022463	VARS	51	70.599	ENSEBUG00000007086	vars	84	69.634	Eptatretus_burgeri
ENSOCUG00000022463	VARS	58	62.225	ENSEBUG00000004637	vars	100	62.500	Eptatretus_burgeri
ENSOCUG00000022463	VARS	100	92.654	ENSEASG00005015673	VARS	100	92.496	Equus_asinus_asinus
ENSOCUG00000022463	VARS	100	92.581	ENSECAG00000014620	VARS	100	92.344	Equus_caballus
ENSOCUG00000022463	VARS	83	89.619	ENSEEUG00000004116	VARS	80	89.619	Erinaceus_europaeus
ENSOCUG00000022463	VARS	100	62.760	ENSELUG00000006550	vars	97	62.914	Esox_lucius
ENSOCUG00000022463	VARS	100	91.232	ENSFCAG00000004510	VARS	100	91.074	Felis_catus
ENSOCUG00000022463	VARS	81	89.198	ENSFDAG00000011401	VARS	100	89.095	Fukomys_damarensis
ENSOCUG00000022463	VARS	100	64.075	ENSFHEG00000010672	vars	100	64.152	Fundulus_heteroclitus
ENSOCUG00000022463	VARS	100	63.833	ENSGAFG00000021630	vars	100	64.174	Gambusia_affinis
ENSOCUG00000022463	VARS	92	64.987	ENSGACG00000009601	vars	98	64.417	Gasterosteus_aculeatus
ENSOCUG00000022463	VARS	50	62.580	ENSGAGG00000006508	-	91	62.580	Gopherus_agassizii
ENSOCUG00000022463	VARS	100	92.192	ENSGGOG00000011364	VARS	100	92.192	Gorilla_gorilla
ENSOCUG00000022463	VARS	100	62.954	ENSHBUG00000017151	vars	97	63.219	Haplochromis_burtoni
ENSOCUG00000022463	VARS	100	87.736	ENSHGLG00000011646	VARS	100	88.775	Heterocephalus_glaber_female
ENSOCUG00000022463	VARS	93	81.250	ENSHGLG00100018062	VARS	100	81.083	Heterocephalus_glaber_male
ENSOCUG00000022463	VARS	99	63.788	ENSHCOG00000012198	vars	99	63.867	Hippocampus_comes
ENSOCUG00000022463	VARS	100	63.601	ENSIPUG00000005218	vars	100	63.891	Ictalurus_punctatus
ENSOCUG00000022463	VARS	100	91.864	ENSSTOG00000013112	VARS	100	92.022	Ictidomys_tridecemlineatus
ENSOCUG00000022463	VARS	100	88.617	ENSJJAG00000019749	-	100	88.538	Jaculus_jaculus
ENSOCUG00000022463	VARS	100	69.992	ENSJJAG00000015343	-	100	70.198	Jaculus_jaculus
ENSOCUG00000022463	VARS	100	64.206	ENSKMAG00000009455	vars	100	64.206	Kryptolebias_marmoratus
ENSOCUG00000022463	VARS	100	63.492	ENSLBEG00000010341	vars	92	71.643	Labrus_bergylta
ENSOCUG00000022463	VARS	73	69.330	ENSLACG00000015232	VARS	99	61.066	Latimeria_chalumnae
ENSOCUG00000022463	VARS	100	64.656	ENSLOCG00000004240	vars	100	65.493	Lepisosteus_oculatus
ENSOCUG00000022463	VARS	100	91.291	ENSLAFG00000023090	VARS	100	91.291	Loxodonta_africana
ENSOCUG00000022463	VARS	100	92.035	ENSMFAG00000001032	VARS	100	92.247	Macaca_fascicularis
ENSOCUG00000022463	VARS	100	92.035	ENSMMUG00000006828	VARS	100	92.247	Macaca_mulatta
ENSOCUG00000022463	VARS	100	92.035	ENSMNEG00000042072	VARS	100	92.247	Macaca_nemestrina
ENSOCUG00000022463	VARS	100	91.956	ENSMLEG00000039307	VARS	100	92.168	Mandrillus_leucophaeus
ENSOCUG00000022463	VARS	100	63.141	ENSMAMG00000003949	vars	100	63.310	Mastacembelus_armatus
ENSOCUG00000022463	VARS	100	63.391	ENSMZEG00005018327	vars	100	62.846	Maylandia_zebra
ENSOCUG00000022463	VARS	100	90.126	ENSMAUG00000006715	Vars	100	89.889	Mesocricetus_auratus
ENSOCUG00000022463	VARS	100	90.837	ENSMICG00000003548	VARS	100	92.786	Microcebus_murinus
ENSOCUG00000022463	VARS	100	88.142	ENSMOCG00000015404	Vars	100	87.984	Microtus_ochrogaster
ENSOCUG00000022463	VARS	100	64.032	ENSMMOG00000015801	vars	100	63.478	Mola_mola
ENSOCUG00000022463	VARS	100	84.281	ENSMODG00000015204	-	100	84.044	Monodelphis_domestica
ENSOCUG00000022463	VARS	99	63.500	ENSMALG00000022532	vars	99	63.500	Monopterus_albus
ENSOCUG00000022463	VARS	100	90.830	MGP_CAROLIEiJ_G0021491	Vars	100	90.751	Mus_caroli
ENSOCUG00000022463	VARS	100	90.830	ENSMUSG00000007029	Vars	100	90.751	Mus_musculus
ENSOCUG00000022463	VARS	100	90.514	MGP_PahariEiJ_G0020486	Vars	100	90.751	Mus_pahari
ENSOCUG00000022463	VARS	100	90.909	MGP_SPRETEiJ_G0022396	Vars	100	90.830	Mus_spretus
ENSOCUG00000022463	VARS	100	91.390	ENSMPUG00000010821	VARS	100	91.153	Mustela_putorius_furo
ENSOCUG00000022463	VARS	78	90.909	ENSMLUG00000013126	VARS	100	90.707	Myotis_lucifugus
ENSOCUG00000022463	VARS	100	90.119	ENSNGAG00000012151	Vars	100	90.182	Nannospalax_galili
ENSOCUG00000022463	VARS	100	62.722	ENSNBRG00000020520	vars	100	62.986	Neolamprologus_brichardi
ENSOCUG00000022463	VARS	100	91.640	ENSNLEG00000006351	VARS	100	91.483	Nomascus_leucogenys
ENSOCUG00000022463	VARS	96	86.694	ENSMEUG00000011378	VARS	100	83.149	Notamacropus_eugenii
ENSOCUG00000022463	VARS	100	93.049	ENSOPRG00000003607	VARS	100	92.891	Ochotona_princeps
ENSOCUG00000022463	VARS	100	89.328	ENSODEG00000017681	VARS	100	89.303	Octodon_degus
ENSOCUG00000022463	VARS	100	63.601	ENSONIG00000013064	vars	99	66.406	Oreochromis_niloticus
ENSOCUG00000022463	VARS	77	75.891	ENSOANG00000005400	VARS	98	75.178	Ornithorhynchus_anatinus
ENSOCUG00000022463	VARS	100	63.405	ENSORLG00000013063	vars	100	63.713	Oryzias_latipes
ENSOCUG00000022463	VARS	100	63.756	ENSORLG00020003504	vars	100	64.158	Oryzias_latipes_hni
ENSOCUG00000022463	VARS	100	63.867	ENSORLG00015009001	vars	100	64.059	Oryzias_latipes_hsok
ENSOCUG00000022463	VARS	100	63.524	ENSOMEG00000015016	vars	100	63.390	Oryzias_melastigma
ENSOCUG00000022463	VARS	100	90.758	ENSOGAG00000007515	VARS	100	90.758	Otolemur_garnettii
ENSOCUG00000022463	VARS	100	92.192	ENSPPAG00000034012	VARS	100	92.035	Pan_paniscus
ENSOCUG00000022463	VARS	100	91.390	ENSPPRG00000014855	VARS	100	91.232	Panthera_pardus
ENSOCUG00000022463	VARS	85	91.280	ENSPTIG00000010462	VARS	95	90.951	Panthera_tigris_altaica
ENSOCUG00000022463	VARS	100	92.271	ENSPTRG00000017985	VARS	100	92.114	Pan_troglodytes
ENSOCUG00000022463	VARS	100	90.409	ENSPANG00000014565	VARS	100	90.615	Papio_anubis
ENSOCUG00000022463	VARS	94	71.865	ENSPKIG00000016304	vars	100	62.828	Paramormyrops_kingsleyae
ENSOCUG00000022463	VARS	100	63.856	ENSPMGG00000023909	vars	100	64.246	Periophthalmus_magnuspinnatus
ENSOCUG00000022463	VARS	100	90.758	ENSPEMG00000006639	Vars	100	90.600	Peromyscus_maniculatus_bairdii
ENSOCUG00000022463	VARS	100	83.965	ENSPCIG00000018553	VARS	100	83.728	Phascolarctos_cinereus
ENSOCUG00000022463	VARS	100	64.065	ENSPFOG00000015690	vars	100	64.330	Poecilia_formosa
ENSOCUG00000022463	VARS	100	64.980	ENSPLAG00000009590	vars	100	64.980	Poecilia_latipinna
ENSOCUG00000022463	VARS	100	64.065	ENSPMEG00000004708	vars	100	64.330	Poecilia_mexicana
ENSOCUG00000022463	VARS	100	64.269	ENSPREG00000013264	vars	100	63.937	Poecilia_reticulata
ENSOCUG00000022463	VARS	100	90.142	ENSPPYG00000016460	VARS	100	90.379	Pongo_abelii
ENSOCUG00000022463	VARS	86	91.203	ENSPCAG00000013565	VARS	86	91.203	Procavia_capensis
ENSOCUG00000022463	VARS	100	92.186	ENSPCOG00000010942	VARS	100	91.949	Propithecus_coquereli
ENSOCUG00000022463	VARS	100	88.389	ENSPVAG00000012403	VARS	100	88.310	Pteropus_vampyrus
ENSOCUG00000022463	VARS	100	62.954	ENSPNYG00000022511	vars	100	63.219	Pundamilia_nyererei
ENSOCUG00000022463	VARS	100	63.223	ENSPNAG00000020962	vars	100	63.538	Pygocentrus_nattereri
ENSOCUG00000022463	VARS	100	90.837	ENSRNOG00000000867	Vars	100	90.679	Rattus_norvegicus
ENSOCUG00000022463	VARS	100	92.192	ENSRBIG00000041669	VARS	100	92.192	Rhinopithecus_bieti
ENSOCUG00000022463	VARS	100	92.192	ENSRROG00000045490	VARS	100	92.192	Rhinopithecus_roxellana
ENSOCUG00000022463	VARS	100	91.562	ENSSBOG00000035402	VARS	100	91.404	Saimiri_boliviensis_boliviensis
ENSOCUG00000022463	VARS	100	79.969	ENSSHAG00000006937	VARS	100	80.204	Sarcophilus_harrisii
ENSOCUG00000022463	VARS	100	63.279	ENSSFOG00015014272	vars	100	63.454	Scleropages_formosus
ENSOCUG00000022463	VARS	100	62.210	ENSSMAG00000009596	vars	99	62.189	Scophthalmus_maximus
ENSOCUG00000022463	VARS	100	63.012	ENSSDUG00000014177	vars	100	63.276	Seriola_dumerili
ENSOCUG00000022463	VARS	100	63.012	ENSSLDG00000025316	vars	100	63.276	Seriola_lalandi_dorsalis
ENSOCUG00000022463	VARS	100	63.125	ENSSPAG00000017068	vars	100	63.523	Stegastes_partitus
ENSOCUG00000022463	VARS	100	91.081	ENSSSCG00000038950	VARS	100	90.845	Sus_scrofa
ENSOCUG00000022463	VARS	82	63.016	ENSTRUG00000012307	vars	98	63.436	Takifugu_rubripes
ENSOCUG00000022463	VARS	100	63.807	ENSTNIG00000008011	vars	100	64.157	Tetraodon_nigroviridis
ENSOCUG00000022463	VARS	51	97.753	ENSTBEG00000004728	-	57	97.753	Tupaia_belangeri
ENSOCUG00000022463	VARS	95	93.213	ENSTTRG00000014128	VARS	94	93.213	Tursiops_truncatus
ENSOCUG00000022463	VARS	100	88.038	ENSUAMG00000010424	VARS	100	87.940	Ursus_americanus
ENSOCUG00000022463	VARS	93	89.557	ENSUMAG00000013486	VARS	98	89.082	Ursus_maritimus
ENSOCUG00000022463	VARS	100	90.766	ENSVVUG00000021323	VARS	100	90.529	Vulpes_vulpes
ENSOCUG00000022463	VARS	96	60.757	ENSXETG00000024076	vars	98	61.215	Xenopus_tropicalis
ENSOCUG00000022463	VARS	100	63.693	ENSXCOG00000019172	vars	100	64.038	Xiphophorus_couchianus
ENSOCUG00000022463	VARS	100	63.988	ENSXMAG00000010927	vars	100	64.252	Xiphophorus_maculatus