EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000022489 (Gene tree)
Gene ID: 100344472
Gene Symbol: -
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 19646 bases
Position: chr6:18631799-18651444
Accession: 100344472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000025990	eIF-3c_N	PF05470.12	2.9e-272	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000031560	-	2820	XM_002711877	ENSOCUP00000025990	913 (aa)	XP_002711923	G1U971

Gene Model

Click here to download ENSOCUG00000022489's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000022489's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000022489	-	100	98.576	ENSG00000184110	EIF3C	100	100.000	Homo_sapiens
ENSOCUG00000022489	-	100	98.468	ENSG00000205609	EIF3CL	100	98.468	Homo_sapiens
ENSOCUG00000022489	-	99	76.056	ENSAPOG00000024092	eif3c	92	84.339	Acanthochromis_polyacanthus
ENSOCUG00000022489	-	100	99.452	ENSAMEG00000015454	-	100	99.452	Ailuropoda_melanoleuca
ENSOCUG00000022489	-	99	73.817	ENSACIG00000015082	eif3c	93	84.219	Amphilophus_citrinellus
ENSOCUG00000022489	-	94	84.158	ENSAOCG00000021466	eif3c	98	76.387	Amphiprion_ocellaris
ENSOCUG00000022489	-	94	84.158	ENSAPEG00000010521	eif3c	98	76.387	Amphiprion_percula
ENSOCUG00000022489	-	99	76.706	ENSATEG00000019001	eif3c	98	77.065	Anabas_testudineus
ENSOCUG00000022489	-	100	86.572	ENSACAG00000005937	-	100	86.681	Anolis_carolinensis
ENSOCUG00000022489	-	100	98.467	ENSANAG00000020640	-	100	98.467	Aotus_nancymaae
ENSOCUG00000022489	-	84	83.802	ENSACLG00000009347	eif3c	95	83.802	Astatotilapia_calliptera
ENSOCUG00000022489	-	84	80.945	ENSACLG00000009322	eif3c	92	80.945	Astatotilapia_calliptera
ENSOCUG00000022489	-	99	76.813	ENSAMXG00000020949	eif3c	98	76.856	Astyanax_mexicanus
ENSOCUG00000022489	-	100	98.248	ENSBTAG00000006543	EIF3CL	100	98.248	Bos_taurus
ENSOCUG00000022489	-	95	42.825	WBGene00001226	eif-3.C	93	43.356	Caenorhabditis_elegans
ENSOCUG00000022489	-	100	98.357	ENSCJAG00000006341	-	100	98.357	Callithrix_jacchus
ENSOCUG00000022489	-	100	99.124	ENSCAFG00000017143	-	100	99.124	Canis_familiaris
ENSOCUG00000022489	-	100	99.233	ENSCAFG00020017587	-	100	99.233	Canis_lupus_dingo
ENSOCUG00000022489	-	100	98.576	ENSCHIG00000024795	-	100	98.576	Capra_hircus
ENSOCUG00000022489	-	100	98.467	ENSTSYG00000003486	-	100	98.467	Carlito_syrichta
ENSOCUG00000022489	-	96	89.354	ENSCAPG00000015887	-	100	89.354	Cavia_aperea
ENSOCUG00000022489	-	100	98.795	ENSCPOG00000007533	-	100	98.795	Cavia_porcellus
ENSOCUG00000022489	-	99	83.260	ENSCCAG00000029099	-	99	81.978	Cebus_capucinus
ENSOCUG00000022489	-	100	93.100	ENSCCAG00000027724	-	100	92.333	Cebus_capucinus
ENSOCUG00000022489	-	100	97.371	ENSCCAG00000034928	-	100	97.371	Cebus_capucinus
ENSOCUG00000022489	-	100	98.467	ENSCATG00000032673	-	100	98.467	Cercocebus_atys
ENSOCUG00000022489	-	100	98.028	ENSCLAG00000011094	-	100	98.028	Chinchilla_lanigera
ENSOCUG00000022489	-	100	98.467	ENSCSAG00000006297	-	100	98.467	Chlorocebus_sabaeus
ENSOCUG00000022489	-	55	82.625	ENSCHOG00000003120	-	88	82.625	Choloepus_hoffmanni
ENSOCUG00000022489	-	71	92.038	ENSCPBG00000012407	-	92	83.537	Chrysemys_picta_bellii
ENSOCUG00000022489	-	79	56.164	ENSCSAVG00000006744	-	96	56.842	Ciona_savignyi
ENSOCUG00000022489	-	100	98.467	ENSCANG00000033626	-	100	98.467	Colobus_angolensis_palliatus
ENSOCUG00000022489	-	100	97.481	ENSCGRG00001015265	EIF3C	100	97.481	Cricetulus_griseus_chok1gshd
ENSOCUG00000022489	-	100	75.109	ENSCSEG00000017770	eif3c	100	75.218	Cynoglossus_semilaevis
ENSOCUG00000022489	-	99	75.599	ENSCVAG00000005402	eif3c	98	81.981	Cyprinodon_variegatus
ENSOCUG00000022489	-	99	76.253	ENSDARG00000016443	eif3c	98	76.061	Danio_rerio
ENSOCUG00000022489	-	100	99.124	ENSDNOG00000031497	-	100	99.124	Dasypus_novemcinctus
ENSOCUG00000022489	-	100	98.905	ENSDORG00000016471	Eif3c	100	98.905	Dipodomys_ordii
ENSOCUG00000022489	-	98	50.998	FBgn0034258	eIF3c	95	50.221	Drosophila_melanogaster
ENSOCUG00000022489	-	92	98.624	ENSETEG00000013527	-	92	98.624	Echinops_telfairi
ENSOCUG00000022489	-	99	62.661	ENSEBUG00000001629	eif3c	99	63.402	Eptatretus_burgeri
ENSOCUG00000022489	-	100	99.014	ENSECAG00000008746	-	100	99.014	Equus_caballus
ENSOCUG00000022489	-	87	97.368	ENSEEUG00000006148	-	100	97.368	Erinaceus_europaeus
ENSOCUG00000022489	-	64	64.286	ENSEEUG00000000726	-	64	64.286	Erinaceus_europaeus
ENSOCUG00000022489	-	99	75.843	ENSELUG00000022257	eif3c	92	83.914	Esox_lucius
ENSOCUG00000022489	-	100	99.124	ENSFCAG00000015782	-	100	99.124	Felis_catus
ENSOCUG00000022489	-	100	98.357	ENSFDAG00000003588	-	100	98.357	Fukomys_damarensis
ENSOCUG00000022489	-	99	76.324	ENSFHEG00000014154	EIF3C	93	84.150	Fundulus_heteroclitus
ENSOCUG00000022489	-	97	75.112	ENSGMOG00000016885	eif3c	99	75.224	Gadus_morhua
ENSOCUG00000022489	-	96	76.871	ENSGACG00000007652	eif3c	100	75.900	Gasterosteus_aculeatus
ENSOCUG00000022489	-	92	83.707	ENSGAGG00000006666	-	100	83.825	Gopherus_agassizii
ENSOCUG00000022489	-	54	96.911	ENSGGOG00000022677	-	100	96.911	Gorilla_gorilla
ENSOCUG00000022489	-	99	96.040	ENSGGOG00000026919	EIF3C	100	98.294	Gorilla_gorilla
ENSOCUG00000022489	-	100	98.686	ENSHGLG00000011445	EIF3C	100	98.686	Heterocephalus_glaber_female
ENSOCUG00000022489	-	100	98.686	ENSHGLG00100000217	EIF3C	100	98.686	Heterocephalus_glaber_male
ENSOCUG00000022489	-	99	75.896	ENSHCOG00000019694	eif3c	98	75.573	Hippocampus_comes
ENSOCUG00000022489	-	99	75.787	ENSIPUG00000016878	eif3c	98	76.496	Ictalurus_punctatus
ENSOCUG00000022489	-	100	99.233	ENSSTOG00000021278	-	100	99.233	Ictidomys_tridecemlineatus
ENSOCUG00000022489	-	100	97.700	ENSJJAG00000012722	Eif3c	100	97.700	Jaculus_jaculus
ENSOCUG00000022489	-	99	76.889	ENSKMAG00000021662	eif3c	97	75.813	Kryptolebias_marmoratus
ENSOCUG00000022489	-	99	75.691	ENSLBEG00000023370	eif3c	99	74.542	Labrus_bergylta
ENSOCUG00000022489	-	100	78.953	ENSLACG00000000770	eif3c	100	80.413	Latimeria_chalumnae
ENSOCUG00000022489	-	100	98.686	ENSLAFG00000027426	-	100	98.686	Loxodonta_africana
ENSOCUG00000022489	-	100	98.467	ENSMFAG00000041930	-	100	98.467	Macaca_fascicularis
ENSOCUG00000022489	-	100	98.467	ENSMMUG00000011798	-	100	98.467	Macaca_mulatta
ENSOCUG00000022489	-	100	98.467	ENSMNEG00000023915	-	100	98.467	Macaca_nemestrina
ENSOCUG00000022489	-	100	98.467	ENSMLEG00000027529	-	100	98.467	Mandrillus_leucophaeus
ENSOCUG00000022489	-	99	75.884	ENSMAMG00000012512	eif3c	95	84.667	Mastacembelus_armatus
ENSOCUG00000022489	-	84	83.802	ENSMZEG00005013699	eif3c	94	83.802	Maylandia_zebra
ENSOCUG00000022489	-	84	81.107	ENSMZEG00005013685	eif3c	92	81.107	Maylandia_zebra
ENSOCUG00000022489	-	100	97.371	ENSMAUG00000010621	Eif3c	100	97.371	Mesocricetus_auratus
ENSOCUG00000022489	-	100	99.233	ENSMICG00000036748	-	100	99.233	Microcebus_murinus
ENSOCUG00000022489	-	100	95.290	ENSMOCG00000004204	Eif3c	100	95.290	Microtus_ochrogaster
ENSOCUG00000022489	-	100	72.210	ENSMMOG00000001572	eif3c	72	82.838	Mola_mola
ENSOCUG00000022489	-	100	94.967	ENSMODG00000015579	-	100	94.967	Monodelphis_domestica
ENSOCUG00000022489	-	84	84.577	ENSMALG00000008907	eif3c	92	84.437	Monopterus_albus
ENSOCUG00000022489	-	100	97.043	MGP_CAROLIEiJ_G0030451	Eif3c	100	97.043	Mus_caroli
ENSOCUG00000022489	-	100	97.043	ENSMUSG00000030738	Eif3c	100	97.043	Mus_musculus
ENSOCUG00000022489	-	100	96.386	MGP_PahariEiJ_G0013661	Eif3c	100	96.386	Mus_pahari
ENSOCUG00000022489	-	100	97.043	MGP_SPRETEiJ_G0031565	Eif3c	100	97.043	Mus_spretus
ENSOCUG00000022489	-	96	98.750	ENSMPUG00000012732	-	100	98.750	Mustela_putorius_furo
ENSOCUG00000022489	-	100	98.028	ENSMLUG00000015558	-	100	98.028	Myotis_lucifugus
ENSOCUG00000022489	-	100	98.686	ENSNGAG00000007177	-	100	98.686	Nannospalax_galili
ENSOCUG00000022489	-	93	87.273	ENSNGAG00000010901	-	98	87.273	Nannospalax_galili
ENSOCUG00000022489	-	100	83.387	ENSNLEG00000001425	-	91	93.333	Nomascus_leucogenys
ENSOCUG00000022489	-	100	77.814	ENSMEUG00000009939	-	99	78.057	Notamacropus_eugenii
ENSOCUG00000022489	-	89	64.557	ENSMEUG00000005317	-	100	62.025	Notamacropus_eugenii
ENSOCUG00000022489	-	100	98.905	ENSOPRG00000000931	-	100	98.905	Ochotona_princeps
ENSOCUG00000022489	-	100	98.467	ENSODEG00000013508	-	100	98.467	Octodon_degus
ENSOCUG00000022489	-	66	63.531	ENSONIG00000011434	eif3c	99	63.531	Oreochromis_niloticus
ENSOCUG00000022489	-	100	91.379	ENSOANG00000011410	-	100	91.379	Ornithorhynchus_anatinus
ENSOCUG00000022489	-	99	75.388	ENSORLG00000006318	eif3c	98	72.260	Oryzias_latipes
ENSOCUG00000022489	-	99	75.388	ENSORLG00020015713	eif3c	96	83.220	Oryzias_latipes_hni
ENSOCUG00000022489	-	99	75.499	ENSORLG00015013772	eif3c	97	74.834	Oryzias_latipes_hsok
ENSOCUG00000022489	-	100	74.758	ENSOMEG00000020450	eif3c	100	74.436	Oryzias_melastigma
ENSOCUG00000022489	-	100	98.905	ENSOGAG00000012737	-	100	98.905	Otolemur_garnettii
ENSOCUG00000022489	-	100	98.576	ENSOARG00000002892	-	100	98.576	Ovis_aries
ENSOCUG00000022489	-	100	99.124	ENSPPRG00000012336	-	100	99.124	Panthera_pardus
ENSOCUG00000022489	-	100	99.124	ENSPTIG00000011712	-	100	99.124	Panthera_tigris_altaica
ENSOCUG00000022489	-	100	98.467	ENSPANG00000021151	-	100	98.467	Papio_anubis
ENSOCUG00000022489	-	99	76.688	ENSPKIG00000002049	eif3c	98	77.233	Paramormyrops_kingsleyae
ENSOCUG00000022489	-	89	85.075	ENSPMGG00000005409	eif3c	94	85.075	Periophthalmus_magnuspinnatus
ENSOCUG00000022489	-	100	96.166	ENSPEMG00000010899	Eif3c	100	96.166	Peromyscus_maniculatus_bairdii
ENSOCUG00000022489	-	100	94.967	ENSPCIG00000025206	-	100	94.967	Phascolarctos_cinereus
ENSOCUG00000022489	-	99	75.787	ENSPFOG00000004476	eif3c	98	75.435	Poecilia_formosa
ENSOCUG00000022489	-	100	71.725	ENSPLAG00000017480	eif3c	98	75.529	Poecilia_latipinna
ENSOCUG00000022489	-	99	76.413	ENSPMEG00000019512	eif3c	98	75.626	Poecilia_mexicana
ENSOCUG00000022489	-	100	95.290	ENSPPYG00000007227	-	100	95.400	Pongo_abelii
ENSOCUG00000022489	-	66	99.002	ENSPCAG00000012710	-	100	99.002	Procavia_capensis
ENSOCUG00000022489	-	100	99.671	ENSPCOG00000019289	-	100	99.671	Propithecus_coquereli
ENSOCUG00000022489	-	100	98.467	ENSPVAG00000005804	-	100	98.467	Pteropus_vampyrus
ENSOCUG00000022489	-	65	69.079	ENSPNYG00000016530	eif3c	81	81.212	Pundamilia_nyererei
ENSOCUG00000022489	-	99	76.915	ENSPNAG00000024040	eif3c	93	83.555	Pygocentrus_nattereri
ENSOCUG00000022489	-	100	96.933	ENSRNOG00000018761	Eif3c	100	96.933	Rattus_norvegicus
ENSOCUG00000022489	-	97	98.414	ENSRBIG00000044009	-	98	95.982	Rhinopithecus_bieti
ENSOCUG00000022489	-	100	98.467	ENSRROG00000043626	-	100	98.467	Rhinopithecus_roxellana
ENSOCUG00000022489	-	77	31.181	YMR309C	-	81	30.515	Saccharomyces_cerevisiae
ENSOCUG00000022489	-	100	98.248	ENSSBOG00000032155	-	100	98.248	Saimiri_boliviensis_boliviensis
ENSOCUG00000022489	-	96	94.564	ENSSHAG00000011808	-	100	94.564	Sarcophilus_harrisii
ENSOCUG00000022489	-	99	75.738	ENSSFOG00015021823	eif3c	98	76.092	Scleropages_formosus
ENSOCUG00000022489	-	97	76.854	ENSSMAG00000016638	eif3c	97	76.742	Scophthalmus_maximus
ENSOCUG00000022489	-	97	79.649	ENSSDUG00000023117	eif3c	98	76.253	Seriola_dumerili
ENSOCUG00000022489	-	99	76.030	ENSSLDG00000009706	eif3c	93	83.660	Seriola_lalandi_dorsalis
ENSOCUG00000022489	-	100	83.934	ENSSPUG00000016470	-	100	84.918	Sphenodon_punctatus
ENSOCUG00000022489	-	100	75.974	ENSSPAG00000000426	eif3c	100	76.087	Stegastes_partitus
ENSOCUG00000022489	-	100	98.795	ENSSSCG00000034927	-	100	98.795	Sus_scrofa
ENSOCUG00000022489	-	99	74.169	ENSTRUG00000008951	eif3c	99	74.598	Takifugu_rubripes
ENSOCUG00000022489	-	100	74.022	ENSTNIG00000015210	eif3c	100	74.674	Tetraodon_nigroviridis
ENSOCUG00000022489	-	100	98.576	ENSTTRG00000005880	-	100	98.576	Tursiops_truncatus
ENSOCUG00000022489	-	72	99.695	ENSUAMG00000001127	-	91	100.000	Ursus_americanus
ENSOCUG00000022489	-	100	99.343	ENSUMAG00000010927	-	100	99.343	Ursus_maritimus
ENSOCUG00000022489	-	100	97.700	ENSVVUG00000025970	-	100	97.700	Vulpes_vulpes
ENSOCUG00000022489	-	100	78.618	ENSXETG00000002941	eif3c	100	79.180	Xenopus_tropicalis
ENSOCUG00000022489	-	100	75.702	ENSXMAG00000013796	eif3c	100	75.054	Xiphophorus_maculatus