EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000022668 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 1969 bases
Position: chrGL019158:36109-38077
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000022192	RRM_1	PF00076.22	9.2e-36	1	2
ENSOCUP00000022192	RRM_1	PF00076.22	9.2e-36	2	2
ENSOCUP00000022192	HnRNPA1	PF11627.8	5.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000030800	-	1876	-	ENSOCUP00000022192	340 (aa)	-	G1TYM6

Gene Model

Click here to download ENSOCUG00000022668's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000022668's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000022668	-	54	44.118	ENSOCUG00000001357	HNRNPD	65	41.758
ENSOCUG00000022668	-	99	72.575	ENSOCUG00000023444	-	60	97.297
ENSOCUG00000022668	-	100	75.000	ENSOCUG00000023322	-	69	97.409
ENSOCUG00000022668	-	65	64.530	ENSOCUG00000014210	-	78	69.841
ENSOCUG00000022668	-	100	95.897	ENSOCUG00000021007	-	84	95.855
ENSOCUG00000022668	-	100	86.752	ENSOCUG00000021006	-	78	95.855
ENSOCUG00000022668	-	53	43.421	ENSOCUG00000002271	RBM3	54	41.379
ENSOCUG00000022668	-	51	41.279	ENSOCUG00000026424	HNRNPAB	64	40.909
ENSOCUG00000022668	-	57	75.130	ENSOCUG00000026859	HNRNPA2B1	52	76.216
ENSOCUG00000022668	-	99	72.241	ENSOCUG00000010985	-	60	96.622
ENSOCUG00000022668	-	100	97.647	ENSOCUG00000028124	-	93	97.647
ENSOCUG00000022668	-	95	73.913	ENSOCUG00000022627	-	66	94.301
ENSOCUG00000022668	-	68	53.097	ENSOCUG00000005703	-	75	58.989
ENSOCUG00000022668	-	71	71.369	ENSOCUG00000023949	-	64	76.684
ENSOCUG00000022668	-	53	42.442	ENSOCUG00000010440	MSI2	54	42.442
ENSOCUG00000022668	-	100	88.341	ENSOCUG00000023674	-	84	97.409
ENSOCUG00000022668	-	71	62.963	ENSOCUG00000006431	-	78	74.468
ENSOCUG00000022668	-	54	84.783	ENSOCUG00000002743	-	65	83.957
ENSOCUG00000022668	-	53	32.632	ENSOCUG00000025252	-	85	32.632
ENSOCUG00000022668	-	69	87.179	ENSOCUG00000022568	-	79	96.891

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000022668	-	92	52.716	ENSCAFG00000017424	-	65	63.830	Canis_familiaris
ENSOCUG00000022668	-	95	66.436	ENSCSAG00000004770	-	80	100.000	Chlorocebus_sabaeus
ENSOCUG00000022668	-	55	87.766	ENSCSAG00000000148	-	52	86.979	Chlorocebus_sabaeus
ENSOCUG00000022668	-	88	70.404	ENSDNOG00000039025	-	81	75.648	Dasypus_novemcinctus
ENSOCUG00000022668	-	73	49.393	ENSDNOG00000037420	-	81	81.395	Dasypus_novemcinctus
ENSOCUG00000022668	-	95	75.000	ENSDNOG00000036385	-	91	74.419	Dasypus_novemcinctus
ENSOCUG00000022668	-	100	56.176	ENSETEG00000007429	-	94	86.885	Echinops_telfairi
ENSOCUG00000022668	-	66	82.500	ENSETEG00000010614	-	87	82.500	Echinops_telfairi
ENSOCUG00000022668	-	91	80.882	ENSETEG00000013374	-	95	83.607	Echinops_telfairi
ENSOCUG00000022668	-	87	86.559	ENSELUG00000020089	-	89	62.025	Esox_lucius
ENSOCUG00000022668	-	68	89.286	ENSFDAG00000009166	-	59	71.591	Fukomys_damarensis
ENSOCUG00000022668	-	65	66.667	ENSMPUG00000000096	-	90	68.240	Mustela_putorius_furo
ENSOCUG00000022668	-	56	81.250	ENSNLEG00000034385	-	52	81.250	Nomascus_leucogenys
ENSOCUG00000022668	-	56	86.458	ENSNLEG00000029989	-	53	86.842	Nomascus_leucogenys
ENSOCUG00000022668	-	72	77.419	ENSOARG00000010092	-	75	81.818	Ovis_aries
ENSOCUG00000022668	-	99	72.059	ENSPPRG00000018110	-	89	93.158	Panthera_pardus