EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000022768 (Gene tree)
Gene ID: 100351937
Gene Symbol: -
Alias: -
Full Name: ribonuclease P/MRP subunit p38
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 837 bases
Position: chr16:46238610-46239446
Accession: 100351937
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000014161	Ribosomal_L7Ae	PF01248.26	4.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000016475	-	837	XM_002717430	ENSOCUP00000014161	278 (aa)	XP_002717476	G1TBP9

Gene Model

Click here to download ENSOCUG00000022768's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03008	Ribosome biogenesis in eukaryotes	KEGG
ocu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000022768's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000022768	-	100	98.561	ENSOCUG00000024367	-	100	98.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000022768	-	100	76.056	ENSG00000152464	RPP38	100	77.381	Homo_sapiens
ENSOCUG00000022768	-	94	42.908	ENSAPOG00000001240	rpp38	94	43.116	Acanthochromis_polyacanthus
ENSOCUG00000022768	-	100	73.145	ENSAMEG00000018832	RPP38	100	73.145	Ailuropoda_melanoleuca
ENSOCUG00000022768	-	87	42.248	ENSACIG00000011592	rpp38	95	39.858	Amphilophus_citrinellus
ENSOCUG00000022768	-	94	41.958	ENSAOCG00000017293	rpp38	94	41.549	Amphiprion_ocellaris
ENSOCUG00000022768	-	94	44.118	ENSAPEG00000002315	rpp38	94	43.704	Amphiprion_percula
ENSOCUG00000022768	-	96	43.662	ENSATEG00000000731	rpp38	95	43.542	Anabas_testudineus
ENSOCUG00000022768	-	91	51.938	ENSAPLG00000002054	RPP38	91	51.953	Anas_platyrhynchos
ENSOCUG00000022768	-	94	41.636	ENSACLG00000016962	rpp38	94	41.111	Astatotilapia_calliptera
ENSOCUG00000022768	-	94	42.007	ENSACLG00000016958	rpp38	94	41.481	Astatotilapia_calliptera
ENSOCUG00000022768	-	89	44.130	ENSAMXG00000025023	rpp38	87	43.902	Astyanax_mexicanus
ENSOCUG00000022768	-	100	69.718	ENSBTAG00000007702	RPP38	94	69.925	Bos_taurus
ENSOCUG00000022768	-	100	70.671	ENSCAFG00000024373	RPP38	94	70.189	Canis_familiaris
ENSOCUG00000022768	-	100	70.671	ENSCAFG00020008008	RPP38	94	70.189	Canis_lupus_dingo
ENSOCUG00000022768	-	100	68.662	ENSCHIG00000012484	RPP38	94	68.797	Capra_hircus
ENSOCUG00000022768	-	100	72.887	ENSCPOG00000003981	RPP38	94	72.556	Cavia_porcellus
ENSOCUG00000022768	-	100	75.352	ENSCLAG00000010194	RPP38	94	75.188	Chinchilla_lanigera
ENSOCUG00000022768	-	94	77.820	ENSCSAG00000019055	RPP38	94	77.820	Chlorocebus_sabaeus
ENSOCUG00000022768	-	100	76.056	ENSCHOG00000004335	RPP38	94	75.564	Choloepus_hoffmanni
ENSOCUG00000022768	-	100	66.197	ENSCGRG00001001395	Rpp38	94	67.669	Cricetulus_griseus_chok1gshd
ENSOCUG00000022768	-	100	66.197	ENSCGRG00000017441	Rpp38	94	67.669	Cricetulus_griseus_crigri
ENSOCUG00000022768	-	94	42.066	ENSCSEG00000001721	rpp38	94	41.791	Cynoglossus_semilaevis
ENSOCUG00000022768	-	95	41.429	ENSCVAG00000001676	rpp38	94	42.599	Cyprinodon_variegatus
ENSOCUG00000022768	-	94	44.737	ENSDARG00000040350	rpp38	92	44.015	Danio_rerio
ENSOCUG00000022768	-	100	73.592	ENSDNOG00000040314	RPP38	94	72.932	Dasypus_novemcinctus
ENSOCUG00000022768	-	100	68.085	ENSDORG00000009783	Rpp38	93	67.424	Dipodomys_ordii
ENSOCUG00000022768	-	100	71.127	ENSETEG00000002839	RPP38	100	71.127	Echinops_telfairi
ENSOCUG00000022768	-	99	74.643	ENSEASG00005019783	RPP38	93	74.436	Equus_asinus_asinus
ENSOCUG00000022768	-	100	69.366	ENSEEUG00000014677	RPP38	94	69.549	Erinaceus_europaeus
ENSOCUG00000022768	-	87	42.963	ENSELUG00000010160	rpp38	89	41.392	Esox_lucius
ENSOCUG00000022768	-	100	69.611	ENSFCAG00000022449	RPP38	100	69.611	Felis_catus
ENSOCUG00000022768	-	91	51.331	ENSFALG00000014804	RPP38	89	51.341	Ficedula_albicollis
ENSOCUG00000022768	-	100	73.944	ENSFDAG00000018669	RPP38	94	74.060	Fukomys_damarensis
ENSOCUG00000022768	-	95	39.298	ENSFHEG00000013741	rpp38	94	38.652	Fundulus_heteroclitus
ENSOCUG00000022768	-	94	53.008	ENSGALG00000008794	RPP38	88	52.672	Gallus_gallus
ENSOCUG00000022768	-	59	46.341	ENSGACG00000009258	rpp38	97	45.732	Gasterosteus_aculeatus
ENSOCUG00000022768	-	94	41.636	ENSHBUG00000010937	rpp38	94	41.111	Haplochromis_burtoni
ENSOCUG00000022768	-	100	72.887	ENSHGLG00000012144	RPP38	94	72.556	Heterocephalus_glaber_female
ENSOCUG00000022768	-	88	40.486	ENSIPUG00000022879	rpp38	92	38.521	Ictalurus_punctatus
ENSOCUG00000022768	-	100	73.239	ENSSTOG00000025699	RPP38	98	73.239	Ictidomys_tridecemlineatus
ENSOCUG00000022768	-	100	73.592	ENSJJAG00000007523	Rpp38	100	73.592	Jaculus_jaculus
ENSOCUG00000022768	-	87	42.126	ENSKMAG00000003986	rpp38	87	40.239	Kryptolebias_marmoratus
ENSOCUG00000022768	-	92	43.820	ENSLBEG00000006853	rpp38	93	42.586	Labrus_bergylta
ENSOCUG00000022768	-	95	47.368	ENSLACG00000006502	RPP38	94	47.350	Latimeria_chalumnae
ENSOCUG00000022768	-	96	47.312	ENSLOCG00000018347	rpp38	90	46.538	Lepisosteus_oculatus
ENSOCUG00000022768	-	100	77.032	ENSLAFG00000000509	RPP38	100	77.032	Loxodonta_africana
ENSOCUG00000022768	-	94	77.820	ENSMMUG00000007679	RPP38	94	77.820	Macaca_mulatta
ENSOCUG00000022768	-	96	45.818	ENSMAMG00000012774	rpp38	94	44.403	Mastacembelus_armatus
ENSOCUG00000022768	-	94	42.007	ENSMZEG00005003189	rpp38	94	41.481	Maylandia_zebra
ENSOCUG00000022768	-	94	42.007	ENSMZEG00005003200	rpp38	94	41.481	Maylandia_zebra
ENSOCUG00000022768	-	94	52.632	ENSMGAG00000008217	RPP38	88	52.290	Meleagris_gallopavo
ENSOCUG00000022768	-	100	68.662	ENSMAUG00000003644	Rpp38	94	68.421	Mesocricetus_auratus
ENSOCUG00000022768	-	100	69.718	ENSMOCG00000007020	Rpp38	94	69.173	Microtus_ochrogaster
ENSOCUG00000022768	-	93	39.051	ENSMMOG00000003446	rpp38	92	38.868	Mola_mola
ENSOCUG00000022768	-	100	64.437	ENSMODG00000024091	RPP38	94	64.286	Monodelphis_domestica
ENSOCUG00000022768	-	91	42.701	ENSMALG00000002356	rpp38	91	41.353	Monopterus_albus
ENSOCUG00000022768	-	100	71.831	MGP_CAROLIEiJ_G0023133	Rpp38	94	71.429	Mus_caroli
ENSOCUG00000022768	-	100	71.479	ENSMUSG00000049950	Rpp38	94	71.053	Mus_musculus
ENSOCUG00000022768	-	100	71.831	MGP_PahariEiJ_G0019193	Rpp38	94	71.429	Mus_pahari
ENSOCUG00000022768	-	100	70.775	MGP_SPRETEiJ_G0024051	Rpp38	94	70.301	Mus_spretus
ENSOCUG00000022768	-	99	71.530	ENSMPUG00000018523	RPP38	94	71.321	Mustela_putorius_furo
ENSOCUG00000022768	-	94	72.830	ENSMLUG00000002153	RPP38	94	73.585	Myotis_lucifugus
ENSOCUG00000022768	-	100	71.228	ENSNGAG00000011066	Rpp38	94	70.787	Nannospalax_galili
ENSOCUG00000022768	-	94	41.481	ENSNBRG00000006994	rpp38	95	41.481	Neolamprologus_brichardi
ENSOCUG00000022768	-	95	41.606	ENSONIG00000020467	rpp38	93	42.222	Oreochromis_niloticus
ENSOCUG00000022768	-	87	42.085	ENSORLG00000009219	rpp38	91	41.065	Oryzias_latipes
ENSOCUG00000022768	-	87	40.927	ENSORLG00020011503	rpp38	89	40.000	Oryzias_latipes_hni
ENSOCUG00000022768	-	87	41.270	ENSORLG00015017702	rpp38	89	39.773	Oryzias_latipes_hsok
ENSOCUG00000022768	-	87	42.353	ENSOMEG00000005414	rpp38	94	42.279	Oryzias_melastigma
ENSOCUG00000022768	-	100	77.032	ENSOGAG00000008059	RPP38	94	76.981	Otolemur_garnettii
ENSOCUG00000022768	-	100	69.366	ENSOARG00000004534	RPP38	94	69.549	Ovis_aries
ENSOCUG00000022768	-	100	76.408	ENSPPAG00000041577	RPP38	85	76.316	Pan_paniscus
ENSOCUG00000022768	-	100	71.025	ENSPPRG00000015329	RPP38	100	71.025	Panthera_pardus
ENSOCUG00000022768	-	100	70.671	ENSPTIG00000007188	RPP38	100	70.671	Panthera_tigris_altaica
ENSOCUG00000022768	-	100	76.408	ENSPTRG00000002318	RPP38	85	76.316	Pan_troglodytes
ENSOCUG00000022768	-	92	43.494	ENSPKIG00000025652	rpp38	75	48.148	Paramormyrops_kingsleyae
ENSOCUG00000022768	-	96	55.072	ENSPSIG00000001527	RPP38	91	54.264	Pelodiscus_sinensis
ENSOCUG00000022768	-	100	70.423	ENSPEMG00000008375	Rpp38	94	69.925	Peromyscus_maniculatus_bairdii
ENSOCUG00000022768	-	100	66.197	ENSPCIG00000009096	RPP38	88	65.789	Phascolarctos_cinereus
ENSOCUG00000022768	-	63	47.027	ENSPFOG00000016823	rpp38	83	46.328	Poecilia_formosa
ENSOCUG00000022768	-	89	39.474	ENSPLAG00000007626	rpp38	88	39.852	Poecilia_latipinna
ENSOCUG00000022768	-	87	36.822	ENSPMEG00000020392	rpp38	87	36.641	Poecilia_mexicana
ENSOCUG00000022768	-	89	40.152	ENSPREG00000017744	rpp38	90	39.313	Poecilia_reticulata
ENSOCUG00000022768	-	100	77.113	ENSPPYG00000002113	RPP38	94	77.444	Pongo_abelii
ENSOCUG00000022768	-	94	73.308	ENSPVAG00000007155	RPP38	94	73.308	Pteropus_vampyrus
ENSOCUG00000022768	-	94	42.007	ENSPNYG00000004293	rpp38	94	41.481	Pundamilia_nyererei
ENSOCUG00000022768	-	88	44.490	ENSPNAG00000010633	rpp38	91	43.701	Pygocentrus_nattereri
ENSOCUG00000022768	-	98	69.424	ENSRNOG00000038025	Rpp38	94	67.925	Rattus_norvegicus
ENSOCUG00000022768	-	100	67.254	ENSSHAG00000015529	RPP38	94	66.165	Sarcophilus_harrisii
ENSOCUG00000022768	-	94	44.803	ENSSMAG00000018276	rpp38	93	44.485	Scophthalmus_maximus
ENSOCUG00000022768	-	94	43.173	ENSSDUG00000001651	rpp38	95	41.971	Seriola_dumerili
ENSOCUG00000022768	-	94	42.379	ENSSLDG00000014355	rpp38	95	40.942	Seriola_lalandi_dorsalis
ENSOCUG00000022768	-	100	56.643	ENSSARG00000012099	RPP38	93	54.478	Sorex_araneus
ENSOCUG00000022768	-	100	56.098	ENSSPUG00000005237	-	94	54.647	Sphenodon_punctatus
ENSOCUG00000022768	-	99	55.789	ENSSPUG00000018363	-	93	54.307	Sphenodon_punctatus
ENSOCUG00000022768	-	96	52.000	ENSSPUG00000008560	-	91	49.807	Sphenodon_punctatus
ENSOCUG00000022768	-	94	44.485	ENSSPAG00000020387	rpp38	94	44.074	Stegastes_partitus
ENSOCUG00000022768	-	100	69.338	ENSSSCG00000027110	RPP38	94	68.773	Sus_scrofa
ENSOCUG00000022768	-	91	51.908	ENSTGUG00000001366	RPP38	91	51.923	Taeniopygia_guttata
ENSOCUG00000022768	-	90	45.385	ENSTNIG00000001334	rpp38	95	44.569	Tetraodon_nigroviridis
ENSOCUG00000022768	-	100	68.662	ENSTTRG00000004420	RPP38	94	67.669	Tursiops_truncatus
ENSOCUG00000022768	-	100	73.852	ENSUAMG00000002618	RPP38	94	73.962	Ursus_americanus
ENSOCUG00000022768	-	100	71.930	ENSUMAG00000012382	RPP38	100	72.982	Ursus_maritimus
ENSOCUG00000022768	-	100	70.318	ENSVVUG00000005272	RPP38	94	69.434	Vulpes_vulpes
ENSOCUG00000022768	-	92	49.813	ENSXETG00000003419	rpp38	93	49.430	Xenopus_tropicalis