EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000022988 (Gene tree)
Gene ID: -
Gene Symbol: PAPOLB
Alias: -
Full Name: poly(A) polymerase beta
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 119199 bases
Position: chrGL018871:328256-447454
Accession: 15970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000017147	PAP_RNA-bind	PF04926.15	9.4e-26	1	1
ENSOCUP00000017011	PAP_RNA-bind	PF04926.15	1.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000024861	PAPOLB-201	1674	-	ENSOCUP00000017147	558 (aa)	-	G1TJL9
ENSOCUT00000029637	PAPOLB-202	1890	-	ENSOCUP00000017011	629 (aa)	-	G1TJ85

Gene Model

Click here to download ENSOCUG00000022988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000022988's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000022988	PAPOLB	90	90.060	ENSOCUG00000011531	PAPOLA	86	79.690
ENSOCUG00000022988	PAPOLB	93	69.606	ENSOCUG00000004962	PAPOLG	77	66.207

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000022988	PAPOLB	100	87.766	ENSG00000218823	PAPOLB	95	83.580	Homo_sapiens
ENSOCUG00000022988	PAPOLB	98	86.339	ENSANAG00000033074	PAPOLB	97	80.820	Aotus_nancymaae
ENSOCUG00000022988	PAPOLB	99	88.889	ENSBTAG00000052734	PAPOLB	93	84.929	Bos_taurus
ENSOCUG00000022988	PAPOLB	76	87.059	ENSCPOG00000021527	PAPOLB	99	75.488	Cavia_porcellus
ENSOCUG00000022988	PAPOLB	99	84.821	ENSCLAG00000004689	PAPOLB	97	83.144	Chinchilla_lanigera
ENSOCUG00000022988	PAPOLB	95	89.139	ENSDNOG00000033378	PAPOLB	90	82.428	Dasypus_novemcinctus
ENSOCUG00000022988	PAPOLB	97	89.338	ENSDORG00000001140	Papolb	97	85.622	Dipodomys_ordii
ENSOCUG00000022988	PAPOLB	96	90.388	ENSEASG00005021531	PAPOLB	92	84.929	Equus_asinus_asinus
ENSOCUG00000022988	PAPOLB	95	79.362	ENSHGLG00000002987	-	98	75.253	Heterocephalus_glaber_female
ENSOCUG00000022988	PAPOLB	99	88.632	ENSJJAG00000012212	Papolb	92	83.463	Jaculus_jaculus
ENSOCUG00000022988	PAPOLB	96	90.926	ENSMFAG00000031074	PAPOLB	99	89.234	Macaca_fascicularis
ENSOCUG00000022988	PAPOLB	99	88.632	ENSMMUG00000043732	PAPOLB	89	83.441	Macaca_mulatta
ENSOCUG00000022988	PAPOLB	100	89.680	MGP_CAROLIEiJ_G0027962	Papolb	99	84.112	Mus_caroli
ENSOCUG00000022988	PAPOLB	100	89.680	ENSMUSG00000074817	Papolb	99	84.112	Mus_musculus
ENSOCUG00000022988	PAPOLB	100	88.968	MGP_PahariEiJ_G0024534	Papolb	99	83.489	Mus_pahari
ENSOCUG00000022988	PAPOLB	100	89.680	MGP_SPRETEiJ_G0028966	Papolb	99	84.112	Mus_spretus
ENSOCUG00000022988	PAPOLB	99	87.814	ENSMLUG00000029802	PAPOLB	94	85.323	Myotis_lucifugus
ENSOCUG00000022988	PAPOLB	99	86.250	ENSODEG00000009844	PAPOLB	94	83.148	Octodon_degus
ENSOCUG00000022988	PAPOLB	99	89.146	ENSOGAG00000031103	PAPOLB	90	85.086	Otolemur_garnettii
ENSOCUG00000022988	PAPOLB	99	87.744	ENSPTRG00000045383	PAPOLB	90	82.581	Pan_troglodytes
ENSOCUG00000022988	PAPOLB	94	91.776	ENSUMAG00000007631	PAPOLB	99	86.169	Ursus_maritimus