EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000023095 (Gene tree)
Gene ID: 100347251
Gene Symbol: TRMT13
Alias: -
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 18733 bases
Position: chr13:64004322-64023054
Accession: 100347251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000023876	TRM13	PF05206.14	2.7e-92	1	1
ENSOCUP00000023876	zf-U11-48K	PF05253.12	1.7e-09	1	1
ENSOCUP00000023876	zf-TRM13_CCCH	PF11722.8	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000027649	TRMT13-201	1440	XM_002715836	ENSOCUP00000023876	479 (aa)	XP_002715882	G1U3B6

Gene Model

Click here to download ENSOCUG00000023095's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000023095's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000023095	TRMT13	100	91.476	ENSG00000122435	TRMT13	100	91.476	Homo_sapiens
ENSOCUG00000023095	TRMT13	96	48.000	ENSAPOG00000015131	trmt13	99	48.200	Acanthochromis_polyacanthus
ENSOCUG00000023095	TRMT13	100	89.397	ENSAMEG00000008917	TRMT13	100	89.397	Ailuropoda_melanoleuca
ENSOCUG00000023095	TRMT13	95	51.380	ENSACIG00000005804	trmt13	96	50.000	Amphilophus_citrinellus
ENSOCUG00000023095	TRMT13	96	48.992	ENSAOCG00000023585	trmt13	99	48.992	Amphiprion_ocellaris
ENSOCUG00000023095	TRMT13	96	48.790	ENSAPEG00000004025	trmt13	99	48.790	Amphiprion_percula
ENSOCUG00000023095	TRMT13	99	51.540	ENSATEG00000006597	trmt13	99	51.540	Anabas_testudineus
ENSOCUG00000023095	TRMT13	88	67.371	ENSAPLG00000014924	TRMT13	99	67.371	Anas_platyrhynchos
ENSOCUG00000023095	TRMT13	98	62.658	ENSACAG00000003498	TRMT13	99	62.658	Anolis_carolinensis
ENSOCUG00000023095	TRMT13	100	91.268	ENSANAG00000019525	TRMT13	100	91.268	Aotus_nancymaae
ENSOCUG00000023095	TRMT13	96	53.092	ENSACLG00000020018	trmt13	99	53.092	Astatotilapia_calliptera
ENSOCUG00000023095	TRMT13	95	53.648	ENSAMXG00000017963	trmt13	97	54.077	Astyanax_mexicanus
ENSOCUG00000023095	TRMT13	100	88.981	ENSBTAG00000015781	TRMT13	100	88.981	Bos_taurus
ENSOCUG00000023095	TRMT13	100	89.397	ENSCJAG00000000200	TRMT13	100	89.397	Callithrix_jacchus
ENSOCUG00000023095	TRMT13	65	91.401	ENSCAFG00000020021	TRMT13	99	91.401	Canis_familiaris
ENSOCUG00000023095	TRMT13	57	92.308	ENSCAFG00020011572	TRMT13	95	92.308	Canis_lupus_dingo
ENSOCUG00000023095	TRMT13	100	89.583	ENSCHIG00000015395	TRMT13	99	89.583	Capra_hircus
ENSOCUG00000023095	TRMT13	98	82.415	ENSTSYG00000010811	TRMT13	98	86.869	Carlito_syrichta
ENSOCUG00000023095	TRMT13	75	68.232	ENSCAPG00000009085	TRMT13	100	68.785	Cavia_aperea
ENSOCUG00000023095	TRMT13	99	89.353	ENSCPOG00000000694	TRMT13	99	89.353	Cavia_porcellus
ENSOCUG00000023095	TRMT13	100	91.060	ENSCCAG00000023772	TRMT13	100	91.060	Cebus_capucinus
ENSOCUG00000023095	TRMT13	99	91.875	ENSCATG00000033556	TRMT13	99	91.875	Cercocebus_atys
ENSOCUG00000023095	TRMT13	89	84.272	ENSCLAG00000008220	TRMT13	100	83.803	Chinchilla_lanigera
ENSOCUG00000023095	TRMT13	100	92.723	ENSCSAG00000001506	TRMT13	100	92.723	Chlorocebus_sabaeus
ENSOCUG00000023095	TRMT13	100	69.375	ENSCPBG00000026671	TRMT13	100	69.375	Chrysemys_picta_bellii
ENSOCUG00000023095	TRMT13	100	92.516	ENSCANG00000034659	TRMT13	100	92.516	Colobus_angolensis_palliatus
ENSOCUG00000023095	TRMT13	99	84.407	ENSCGRG00001021601	Trmt13	99	84.407	Cricetulus_griseus_chok1gshd
ENSOCUG00000023095	TRMT13	53	81.712	ENSCGRG00000000093	-	99	81.712	Cricetulus_griseus_crigri
ENSOCUG00000023095	TRMT13	95	48.253	ENSCSEG00000000591	trmt13	97	48.246	Cynoglossus_semilaevis
ENSOCUG00000023095	TRMT13	96	48.842	ENSCVAG00000017342	trmt13	93	49.260	Cyprinodon_variegatus
ENSOCUG00000023095	TRMT13	95	57.082	ENSDARG00000102846	trmt13	96	57.082	Danio_rerio
ENSOCUG00000023095	TRMT13	57	88.768	ENSDNOG00000001710	TRMT13	84	88.768	Dasypus_novemcinctus
ENSOCUG00000023095	TRMT13	99	88.727	ENSDORG00000015808	Trmt13	99	88.727	Dipodomys_ordii
ENSOCUG00000023095	TRMT13	97	30.453	FBgn0037435	CG18048	95	30.453	Drosophila_melanogaster
ENSOCUG00000023095	TRMT13	99	75.000	ENSETEG00000005819	TRMT13	99	75.000	Echinops_telfairi
ENSOCUG00000023095	TRMT13	95	46.022	ENSEBUG00000014444	trmt13	96	45.824	Eptatretus_burgeri
ENSOCUG00000023095	TRMT13	100	91.684	ENSEASG00005015918	TRMT13	100	91.684	Equus_asinus_asinus
ENSOCUG00000023095	TRMT13	100	91.684	ENSECAG00000022626	TRMT13	100	91.684	Equus_caballus
ENSOCUG00000023095	TRMT13	79	80.317	ENSEEUG00000000294	TRMT13	80	80.317	Erinaceus_europaeus
ENSOCUG00000023095	TRMT13	98	54.237	ENSELUG00000003803	trmt13	99	54.757	Esox_lucius
ENSOCUG00000023095	TRMT13	100	90.437	ENSFCAG00000030618	TRMT13	100	90.826	Felis_catus
ENSOCUG00000023095	TRMT13	99	64.151	ENSFALG00000002424	TRMT13	99	64.151	Ficedula_albicollis
ENSOCUG00000023095	TRMT13	99	89.099	ENSFDAG00000006342	TRMT13	99	89.099	Fukomys_damarensis
ENSOCUG00000023095	TRMT13	80	51.399	ENSFHEG00000022954	trmt13	97	51.378	Fundulus_heteroclitus
ENSOCUG00000023095	TRMT13	95	49.339	ENSGMOG00000013223	trmt13	100	49.780	Gadus_morhua
ENSOCUG00000023095	TRMT13	95	65.570	ENSGALG00000005290	TRMT13	98	64.619	Gallus_gallus
ENSOCUG00000023095	TRMT13	75	50.000	ENSGAFG00000001577	trmt13	79	52.124	Gambusia_affinis
ENSOCUG00000023095	TRMT13	96	50.858	ENSGACG00000013428	trmt13	97	51.502	Gasterosteus_aculeatus
ENSOCUG00000023095	TRMT13	100	69.854	ENSGAGG00000023303	TRMT13	99	73.455	Gopherus_agassizii
ENSOCUG00000023095	TRMT13	100	91.268	ENSGGOG00000005616	TRMT13	100	91.268	Gorilla_gorilla
ENSOCUG00000023095	TRMT13	96	53.191	ENSHBUG00000007754	trmt13	99	53.191	Haplochromis_burtoni
ENSOCUG00000023095	TRMT13	99	90.147	ENSHGLG00000002164	TRMT13	99	90.147	Heterocephalus_glaber_female
ENSOCUG00000023095	TRMT13	99	90.147	ENSHGLG00100001618	TRMT13	99	90.147	Heterocephalus_glaber_male
ENSOCUG00000023095	TRMT13	96	47.414	ENSHCOG00000020553	trmt13	98	47.414	Hippocampus_comes
ENSOCUG00000023095	TRMT13	96	55.459	ENSIPUG00000024787	trmt13	98	56.710	Ictalurus_punctatus
ENSOCUG00000023095	TRMT13	100	91.875	ENSSTOG00000013483	TRMT13	100	91.875	Ictidomys_tridecemlineatus
ENSOCUG00000023095	TRMT13	100	86.694	ENSJJAG00000018012	Trmt13	100	86.694	Jaculus_jaculus
ENSOCUG00000023095	TRMT13	63	50.164	ENSKMAG00000007639	trmt13	92	50.164	Kryptolebias_marmoratus
ENSOCUG00000023095	TRMT13	96	50.526	ENSLBEG00000020238	trmt13	99	50.943	Labrus_bergylta
ENSOCUG00000023095	TRMT13	98	61.053	ENSLACG00000013153	TRMT13	100	60.099	Latimeria_chalumnae
ENSOCUG00000023095	TRMT13	95	58.643	ENSLOCG00000000418	trmt13	97	58.643	Lepisosteus_oculatus
ENSOCUG00000023095	TRMT13	77	87.297	ENSLAFG00000002383	TRMT13	100	87.297	Loxodonta_africana
ENSOCUG00000023095	TRMT13	100	91.892	ENSMFAG00000034681	TRMT13	100	91.892	Macaca_fascicularis
ENSOCUG00000023095	TRMT13	100	91.892	ENSMMUG00000004243	TRMT13	100	91.892	Macaca_mulatta
ENSOCUG00000023095	TRMT13	100	91.892	ENSMNEG00000036102	TRMT13	100	91.892	Macaca_nemestrina
ENSOCUG00000023095	TRMT13	99	91.875	ENSMLEG00000034258	TRMT13	99	91.875	Mandrillus_leucophaeus
ENSOCUG00000023095	TRMT13	95	51.844	ENSMAMG00000016597	trmt13	95	51.844	Mastacembelus_armatus
ENSOCUG00000023095	TRMT13	96	52.878	ENSMZEG00005020959	trmt13	99	52.878	Maylandia_zebra
ENSOCUG00000023095	TRMT13	88	66.745	ENSMGAG00000006970	TRMT13	99	66.745	Meleagris_gallopavo
ENSOCUG00000023095	TRMT13	99	83.789	ENSMAUG00000010448	Trmt13	99	83.789	Mesocricetus_auratus
ENSOCUG00000023095	TRMT13	100	92.100	ENSMICG00000005283	TRMT13	100	92.661	Microcebus_murinus
ENSOCUG00000023095	TRMT13	100	81.875	ENSMOCG00000019914	Trmt13	99	81.875	Microtus_ochrogaster
ENSOCUG00000023095	TRMT13	54	50.189	ENSMMOG00000007762	trmt13	89	50.189	Mola_mola
ENSOCUG00000023095	TRMT13	100	75.620	ENSMODG00000003646	TRMT13	100	75.620	Monodelphis_domestica
ENSOCUG00000023095	TRMT13	96	49.892	ENSMALG00000020965	trmt13	97	49.892	Monopterus_albus
ENSOCUG00000023095	TRMT13	99	86.526	MGP_CAROLIEiJ_G0025568	Trmt13	99	86.526	Mus_caroli
ENSOCUG00000023095	TRMT13	99	85.954	ENSMUSG00000033439	Trmt13	99	85.954	Mus_musculus
ENSOCUG00000023095	TRMT13	99	87.002	MGP_PahariEiJ_G0027014	Trmt13	99	87.002	Mus_pahari
ENSOCUG00000023095	TRMT13	99	86.164	MGP_SPRETEiJ_G0026518	Trmt13	99	86.164	Mus_spretus
ENSOCUG00000023095	TRMT13	79	87.139	ENSMPUG00000002078	-	100	87.139	Mustela_putorius_furo
ENSOCUG00000023095	TRMT13	99	79.368	ENSMLUG00000002124	TRMT13	99	79.368	Myotis_lucifugus
ENSOCUG00000023095	TRMT13	95	49.565	ENSNBRG00000006783	trmt13	95	49.565	Neolamprologus_brichardi
ENSOCUG00000023095	TRMT13	100	91.476	ENSNLEG00000035917	TRMT13	100	91.476	Nomascus_leucogenys
ENSOCUG00000023095	TRMT13	52	76.210	ENSMEUG00000013346	-	100	76.210	Notamacropus_eugenii
ENSOCUG00000023095	TRMT13	67	94.118	ENSOPRG00000012048	TRMT13	67	94.118	Ochotona_princeps
ENSOCUG00000023095	TRMT13	98	51.255	ENSONIG00000004574	trmt13	99	52.766	Oreochromis_niloticus
ENSOCUG00000023095	TRMT13	89	73.488	ENSOANG00000012057	TRMT13	99	73.488	Ornithorhynchus_anatinus
ENSOCUG00000023095	TRMT13	96	47.109	ENSORLG00000003320	trmt13	98	47.436	Oryzias_latipes
ENSOCUG00000023095	TRMT13	95	47.312	ENSORLG00020005972	trmt13	97	48.312	Oryzias_latipes_hni
ENSOCUG00000023095	TRMT13	96	51.606	ENSORLG00015002270	trmt13	98	51.606	Oryzias_latipes_hsok
ENSOCUG00000023095	TRMT13	97	50.531	ENSOMEG00000006724	trmt13	95	51.168	Oryzias_melastigma
ENSOCUG00000023095	TRMT13	99	91.543	ENSOGAG00000005618	TRMT13	97	90.852	Otolemur_garnettii
ENSOCUG00000023095	TRMT13	100	89.583	ENSOARG00000017983	TRMT13	99	89.583	Ovis_aries
ENSOCUG00000023095	TRMT13	100	91.060	ENSPPAG00000043736	TRMT13	100	91.060	Pan_paniscus
ENSOCUG00000023095	TRMT13	100	90.852	ENSPPRG00000003424	TRMT13	100	90.852	Panthera_pardus
ENSOCUG00000023095	TRMT13	100	90.852	ENSPTIG00000018598	TRMT13	100	90.852	Panthera_tigris_altaica
ENSOCUG00000023095	TRMT13	100	91.060	ENSPTRG00000001001	TRMT13	100	91.060	Pan_troglodytes
ENSOCUG00000023095	TRMT13	100	92.308	ENSPANG00000007598	TRMT13	100	92.308	Papio_anubis
ENSOCUG00000023095	TRMT13	96	55.895	ENSPKIG00000001514	trmt13	97	55.895	Paramormyrops_kingsleyae
ENSOCUG00000023095	TRMT13	87	70.192	ENSPSIG00000012703	TRMT13	99	70.192	Pelodiscus_sinensis
ENSOCUG00000023095	TRMT13	96	52.381	ENSPMGG00000013298	trmt13	93	52.381	Periophthalmus_magnuspinnatus
ENSOCUG00000023095	TRMT13	100	82.917	ENSPEMG00000000275	Trmt13	99	82.917	Peromyscus_maniculatus_bairdii
ENSOCUG00000023095	TRMT13	95	46.105	ENSPMAG00000000823	trmt13	100	45.287	Petromyzon_marinus
ENSOCUG00000023095	TRMT13	98	76.421	ENSPCIG00000007699	TRMT13	99	77.053	Phascolarctos_cinereus
ENSOCUG00000023095	TRMT13	97	48.718	ENSPFOG00000008675	trmt13	97	48.718	Poecilia_formosa
ENSOCUG00000023095	TRMT13	96	47.974	ENSPLAG00000009709	trmt13	99	47.974	Poecilia_latipinna
ENSOCUG00000023095	TRMT13	96	47.122	ENSPMEG00000022954	trmt13	99	47.122	Poecilia_mexicana
ENSOCUG00000023095	TRMT13	75	51.213	ENSPREG00000005645	trmt13	91	49.819	Poecilia_reticulata
ENSOCUG00000023095	TRMT13	100	91.268	ENSPPYG00000001120	TRMT13	100	91.268	Pongo_abelii
ENSOCUG00000023095	TRMT13	100	87.526	ENSPCAG00000002340	TRMT13	100	87.526	Procavia_capensis
ENSOCUG00000023095	TRMT13	100	91.892	ENSPCOG00000017984	TRMT13	100	91.892	Propithecus_coquereli
ENSOCUG00000023095	TRMT13	99	91.667	ENSPVAG00000017430	TRMT13	99	91.667	Pteropus_vampyrus
ENSOCUG00000023095	TRMT13	96	50.851	ENSPNYG00000013690	trmt13	99	50.851	Pundamilia_nyererei
ENSOCUG00000023095	TRMT13	98	54.298	ENSPNAG00000022130	trmt13	99	54.298	Pygocentrus_nattereri
ENSOCUG00000023095	TRMT13	99	86.583	ENSRNOG00000015140	Trmt13	96	86.583	Rattus_norvegicus
ENSOCUG00000023095	TRMT13	100	92.516	ENSRBIG00000037686	TRMT13	100	92.516	Rhinopithecus_bieti
ENSOCUG00000023095	TRMT13	100	92.516	ENSRROG00000044057	TRMT13	100	92.516	Rhinopithecus_roxellana
ENSOCUG00000023095	TRMT13	100	91.060	ENSSBOG00000026541	TRMT13	100	91.060	Saimiri_boliviensis_boliviensis
ENSOCUG00000023095	TRMT13	91	76.659	ENSSHAG00000005213	TRMT13	97	76.659	Sarcophilus_harrisii
ENSOCUG00000023095	TRMT13	97	54.604	ENSSFOG00015017560	trmt13	98	54.604	Scleropages_formosus
ENSOCUG00000023095	TRMT13	95	51.064	ENSSMAG00000014592	trmt13	95	51.064	Scophthalmus_maximus
ENSOCUG00000023095	TRMT13	95	50.105	ENSSDUG00000015508	trmt13	97	49.587	Seriola_dumerili
ENSOCUG00000023095	TRMT13	96	50.210	ENSSLDG00000019060	trmt13	96	50.210	Seriola_lalandi_dorsalis
ENSOCUG00000023095	TRMT13	99	76.421	ENSSARG00000010344	TRMT13	99	76.421	Sorex_araneus
ENSOCUG00000023095	TRMT13	95	67.763	ENSSPUG00000016339	TRMT13	99	67.763	Sphenodon_punctatus
ENSOCUG00000023095	TRMT13	98	51.458	ENSSPAG00000011922	trmt13	99	51.129	Stegastes_partitus
ENSOCUG00000023095	TRMT13	100	90.021	ENSSSCG00000006869	TRMT13	100	90.021	Sus_scrofa
ENSOCUG00000023095	TRMT13	96	66.157	ENSTGUG00000005253	TRMT13	98	66.157	Taeniopygia_guttata
ENSOCUG00000023095	TRMT13	97	49.476	ENSTRUG00000008400	trmt13	99	49.476	Takifugu_rubripes
ENSOCUG00000023095	TRMT13	86	73.558	ENSTBEG00000008911	TRMT13	100	73.558	Tupaia_belangeri
ENSOCUG00000023095	TRMT13	51	96.053	ENSTTRG00000015302	-	60	96.053	Tursiops_truncatus
ENSOCUG00000023095	TRMT13	100	84.407	ENSUAMG00000017251	TRMT13	100	84.407	Ursus_americanus
ENSOCUG00000023095	TRMT13	100	89.605	ENSUMAG00000007901	TRMT13	100	89.605	Ursus_maritimus
ENSOCUG00000023095	TRMT13	90	72.622	ENSVPAG00000001034	TRMT13	100	72.622	Vicugna_pacos
ENSOCUG00000023095	TRMT13	99	91.060	ENSVVUG00000021996	TRMT13	99	91.060	Vulpes_vulpes
ENSOCUG00000023095	TRMT13	98	55.224	ENSXETG00000013204	trmt13	99	55.224	Xenopus_tropicalis
ENSOCUG00000023095	TRMT13	96	47.346	ENSXMAG00000010765	trmt13	99	47.346	Xiphophorus_maculatus