EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000023338 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 2685 bases
Position: chr3:125365607-125368291
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000017862	EST1	PF10374.9	9.1e-08	1	1
ENSOCUP00000017862	EST1_DNA_bind	PF10373.9	7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000031604	-	2613	-	ENSOCUP00000017862	870 (aa)	-	G1TLL0

Gene Model

Click here to download ENSOCUG00000023338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000023338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000023338	-	97	40.221	ENSOCUG00000012886	SMG5	90	40.442

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000023338	-	99	40.591	ENSG00000198952	SMG5	89	40.700	Homo_sapiens
ENSOCUG00000023338	-	99	36.583	ENSAPOG00000019690	smg5	89	37.077	Acanthochromis_polyacanthus
ENSOCUG00000023338	-	97	40.267	ENSAMEG00000014458	SMG5	90	41.379	Ailuropoda_melanoleuca
ENSOCUG00000023338	-	99	36.026	ENSACIG00000001353	smg5	90	37.247	Amphilophus_citrinellus
ENSOCUG00000023338	-	90	43.548	ENSAOCG00000019483	smg5	86	37.416	Amphiprion_ocellaris
ENSOCUG00000023338	-	90	43.548	ENSAPEG00000022949	smg5	88	37.303	Amphiprion_percula
ENSOCUG00000023338	-	94	43.488	ENSATEG00000005348	smg5	83	43.488	Anabas_testudineus
ENSOCUG00000023338	-	97	38.925	ENSAPLG00000010263	SMG5	91	39.032	Anas_platyrhynchos
ENSOCUG00000023338	-	99	39.935	ENSANAG00000032899	SMG5	89	40.535	Aotus_nancymaae
ENSOCUG00000023338	-	93	43.810	ENSACLG00000009311	smg5	89	36.159	Astatotilapia_calliptera
ENSOCUG00000023338	-	87	44.313	ENSAMXG00000024616	smg5	78	46.329	Astyanax_mexicanus
ENSOCUG00000023338	-	99	62.177	ENSBTAG00000021747	-	89	62.177	Bos_taurus
ENSOCUG00000023338	-	99	40.546	ENSBTAG00000009435	SMG5	89	41.266	Bos_taurus
ENSOCUG00000023338	-	99	39.935	ENSCJAG00000005684	SMG5	93	40.505	Callithrix_jacchus
ENSOCUG00000023338	-	99	40.684	ENSCAFG00000016839	SMG5	89	41.170	Canis_familiaris
ENSOCUG00000023338	-	99	40.684	ENSCAFG00020006061	SMG5	89	41.170	Canis_lupus_dingo
ENSOCUG00000023338	-	99	61.616	ENSCHIG00000006323	-	90	61.616	Capra_hircus
ENSOCUG00000023338	-	99	40.372	ENSCHIG00000007709	SMG5	89	40.984	Capra_hircus
ENSOCUG00000023338	-	99	40.022	ENSTSYG00000004099	SMG5	89	40.351	Carlito_syrichta
ENSOCUG00000023338	-	93	31.771	ENSCAPG00000003631	SMG5	90	32.097	Cavia_aperea
ENSOCUG00000023338	-	99	40.258	ENSCPOG00000015696	SMG5	91	40.797	Cavia_porcellus
ENSOCUG00000023338	-	99	39.978	ENSCCAG00000027409	SMG5	89	40.576	Cebus_capucinus
ENSOCUG00000023338	-	99	40.591	ENSCATG00000030539	SMG5	89	40.700	Cercocebus_atys
ENSOCUG00000023338	-	99	39.759	ENSCLAG00000003983	SMG5	89	40.416	Chinchilla_lanigera
ENSOCUG00000023338	-	99	40.591	ENSCSAG00000002120	SMG5	89	40.700	Chlorocebus_sabaeus
ENSOCUG00000023338	-	60	45.255	ENSCHOG00000008741	-	55	43.985	Choloepus_hoffmanni
ENSOCUG00000023338	-	92	38.970	ENSCPBG00000025848	SMG5	90	39.418	Chrysemys_picta_bellii
ENSOCUG00000023338	-	99	39.737	ENSCANG00000029208	SMG5	89	39.756	Colobus_angolensis_palliatus
ENSOCUG00000023338	-	99	40.328	ENSCGRG00001006336	Smg5	89	40.546	Cricetulus_griseus_chok1gshd
ENSOCUG00000023338	-	62	61.931	ENSCGRG00001000584	-	99	61.931	Cricetulus_griseus_chok1gshd
ENSOCUG00000023338	-	97	40.355	ENSCGRG00000005111	Smg5	90	40.576	Cricetulus_griseus_crigri
ENSOCUG00000023338	-	86	45.000	ENSCSEG00000014220	smg5	82	45.000	Cynoglossus_semilaevis
ENSOCUG00000023338	-	99	33.407	ENSCVAG00000000529	smg5	89	33.626	Cyprinodon_variegatus
ENSOCUG00000023338	-	93	45.146	ENSDARG00000041481	smg5	78	45.146	Danio_rerio
ENSOCUG00000023338	-	95	50.764	ENSDNOG00000039862	-	93	51.234	Dasypus_novemcinctus
ENSOCUG00000023338	-	99	41.009	ENSDORG00000010382	Smg5	89	41.202	Dipodomys_ordii
ENSOCUG00000023338	-	75	51.087	ENSETEG00000010336	SMG5	75	51.087	Echinops_telfairi
ENSOCUG00000023338	-	76	37.685	ENSEBUG00000003739	smg5	74	37.685	Eptatretus_burgeri
ENSOCUG00000023338	-	99	39.739	ENSEASG00005019122	SMG5	90	40.282	Equus_asinus_asinus
ENSOCUG00000023338	-	99	39.957	ENSECAG00000001389	SMG5	90	40.717	Equus_caballus
ENSOCUG00000023338	-	70	51.156	ENSEEUG00000012690	SMG5	65	51.156	Erinaceus_europaeus
ENSOCUG00000023338	-	92	44.975	ENSELUG00000012585	smg5	89	35.185	Esox_lucius
ENSOCUG00000023338	-	99	40.353	ENSFCAG00000011783	SMG5	89	40.904	Felis_catus
ENSOCUG00000023338	-	63	39.333	ENSFALG00000001166	-	99	39.333	Ficedula_albicollis
ENSOCUG00000023338	-	97	40.289	ENSFDAG00000017388	SMG5	90	40.622	Fukomys_damarensis
ENSOCUG00000023338	-	89	46.950	ENSFHEG00000013939	smg5	88	35.941	Fundulus_heteroclitus
ENSOCUG00000023338	-	79	42.444	ENSGMOG00000007310	smg5	91	34.012	Gadus_morhua
ENSOCUG00000023338	-	99	38.795	ENSGALG00000029918	-	90	38.730	Gallus_gallus
ENSOCUG00000023338	-	84	46.020	ENSGAFG00000021691	smg5	88	39.312	Gambusia_affinis
ENSOCUG00000023338	-	91	44.125	ENSGACG00000013142	smg5	91	34.615	Gasterosteus_aculeatus
ENSOCUG00000023338	-	99	39.135	ENSGAGG00000016131	SMG5	90	38.866	Gopherus_agassizii
ENSOCUG00000023338	-	99	40.328	ENSGGOG00000010932	SMG5	89	40.437	Gorilla_gorilla
ENSOCUG00000023338	-	91	43.810	ENSHBUG00000008654	smg5	90	35.974	Haplochromis_burtoni
ENSOCUG00000023338	-	99	40.284	ENSHGLG00000019152	SMG5	89	40.830	Heterocephalus_glaber_female
ENSOCUG00000023338	-	98	40.066	ENSHGLG00100015948	SMG5	99	40.615	Heterocephalus_glaber_male
ENSOCUG00000023338	-	95	34.548	ENSHCOG00000010229	smg5	63	45.144	Hippocampus_comes
ENSOCUG00000023338	-	86	45.169	ENSIPUG00000006624	Smg5	79	45.169	Ictalurus_punctatus
ENSOCUG00000023338	-	99	40.919	ENSSTOG00000001780	SMG5	89	41.357	Ictidomys_tridecemlineatus
ENSOCUG00000023338	-	99	39.588	ENSJJAG00000022763	Smg5	89	40.263	Jaculus_jaculus
ENSOCUG00000023338	-	89	44.893	ENSKMAG00000014586	smg5	82	42.888	Kryptolebias_marmoratus
ENSOCUG00000023338	-	99	36.433	ENSLBEG00000002145	smg5	88	36.543	Labrus_bergylta
ENSOCUG00000023338	-	84	44.529	ENSLACG00000010521	SMG5	90	33.824	Latimeria_chalumnae
ENSOCUG00000023338	-	87	43.810	ENSLOCG00000008380	smg5	90	43.810	Lepisosteus_oculatus
ENSOCUG00000023338	-	99	40.087	ENSLAFG00000006241	SMG5	90	40.632	Loxodonta_africana
ENSOCUG00000023338	-	99	40.591	ENSMFAG00000045357	SMG5	89	40.700	Macaca_fascicularis
ENSOCUG00000023338	-	99	40.909	ENSMMUG00000000090	SMG5	89	41.280	Macaca_mulatta
ENSOCUG00000023338	-	99	40.700	ENSMNEG00000044425	SMG5	89	40.810	Macaca_nemestrina
ENSOCUG00000023338	-	99	37.473	ENSMLEG00000041192	SMG5	89	37.582	Mandrillus_leucophaeus
ENSOCUG00000023338	-	86	45.500	ENSMAMG00000010683	smg5	76	48.711	Mastacembelus_armatus
ENSOCUG00000023338	-	98	35.501	ENSMZEG00005015815	smg5	90	35.714	Maylandia_zebra
ENSOCUG00000023338	-	61	60.644	ENSMAUG00000000043	-	99	60.644	Mesocricetus_auratus
ENSOCUG00000023338	-	99	40.765	ENSMAUG00000010381	Smg5	89	40.984	Mesocricetus_auratus
ENSOCUG00000023338	-	99	40.944	ENSMICG00000002257	SMG5	89	41.712	Microcebus_murinus
ENSOCUG00000023338	-	60	61.835	ENSMOCG00000008423	-	94	61.835	Microtus_ochrogaster
ENSOCUG00000023338	-	99	40.458	ENSMOCG00000016590	Smg5	90	40.132	Microtus_ochrogaster
ENSOCUG00000023338	-	84	42.607	ENSMMOG00000017199	smg5	69	42.607	Mola_mola
ENSOCUG00000023338	-	74	35.806	ENSMODG00000004532	-	71	35.806	Monodelphis_domestica
ENSOCUG00000023338	-	76	36.054	ENSMODG00000004735	-	76	36.054	Monodelphis_domestica
ENSOCUG00000023338	-	97	31.312	ENSMODG00000004511	-	90	31.403	Monodelphis_domestica
ENSOCUG00000023338	-	88	33.933	ENSMODG00000010675	-	79	35.948	Monodelphis_domestica
ENSOCUG00000023338	-	96	40.292	ENSMODG00000016901	SMG5	98	40.471	Monodelphis_domestica
ENSOCUG00000023338	-	88	41.667	ENSMALG00000010375	smg5	79	41.667	Monopterus_albus
ENSOCUG00000023338	-	99	40.219	MGP_CAROLIEiJ_G0025163	Smg5	99	53.371	Mus_caroli
ENSOCUG00000023338	-	99	40.022	ENSMUSG00000001415	Smg5	98	53.371	Mus_musculus
ENSOCUG00000023338	-	99	40.131	MGP_PahariEiJ_G0026606	Smg5	99	53.371	Mus_pahari
ENSOCUG00000023338	-	99	40.241	MGP_SPRETEiJ_G0026104	Smg5	99	53.371	Mus_spretus
ENSOCUG00000023338	-	92	40.771	ENSMPUG00000004546	SMG5	90	41.121	Mustela_putorius_furo
ENSOCUG00000023338	-	99	39.978	ENSMLUG00000008518	SMG5	89	40.741	Myotis_lucifugus
ENSOCUG00000023338	-	99	39.803	ENSNGAG00000020706	Smg5	89	40.437	Nannospalax_galili
ENSOCUG00000023338	-	99	63.982	ENSNGAG00000012101	-	90	63.982	Nannospalax_galili
ENSOCUG00000023338	-	99	34.213	ENSNBRG00000004332	smg5	90	35.659	Neolamprologus_brichardi
ENSOCUG00000023338	-	99	40.700	ENSNLEG00000012439	SMG5	89	40.700	Nomascus_leucogenys
ENSOCUG00000023338	-	99	39.590	ENSMEUG00000012834	SMG5	91	39.806	Notamacropus_eugenii
ENSOCUG00000023338	-	99	40.414	ENSOPRG00000009152	SMG5	89	40.745	Ochotona_princeps
ENSOCUG00000023338	-	99	39.783	ENSODEG00000012237	SMG5	89	40.899	Octodon_degus
ENSOCUG00000023338	-	88	43.187	ENSONIG00000008632	smg5	79	43.943	Oreochromis_niloticus
ENSOCUG00000023338	-	86	45.771	ENSORLG00000016239	smg5	79	45.585	Oryzias_latipes
ENSOCUG00000023338	-	99	36.732	ENSORLG00020013127	smg5	90	38.053	Oryzias_latipes_hni
ENSOCUG00000023338	-	86	45.771	ENSORLG00015019014	smg5	89	37.568	Oryzias_latipes_hsok
ENSOCUG00000023338	-	74	45.192	ENSOMEG00000021330	smg5	91	36.791	Oryzias_melastigma
ENSOCUG00000023338	-	99	40.263	ENSOGAG00000004966	SMG5	89	40.372	Otolemur_garnettii
ENSOCUG00000023338	-	99	62.138	ENSOARG00000011963	-	90	62.138	Ovis_aries
ENSOCUG00000023338	-	99	40.481	ENSOARG00000005778	SMG5	89	41.093	Ovis_aries
ENSOCUG00000023338	-	99	40.481	ENSPPAG00000011996	SMG5	89	40.591	Pan_paniscus
ENSOCUG00000023338	-	97	40.314	ENSPPRG00000011901	SMG5	90	40.873	Panthera_pardus
ENSOCUG00000023338	-	97	37.054	ENSPTIG00000007892	SMG5	89	38.170	Panthera_tigris_altaica
ENSOCUG00000023338	-	99	40.591	ENSPTRG00000023925	SMG5	89	40.700	Pan_troglodytes
ENSOCUG00000023338	-	99	40.591	ENSPTRG00000049282	-	89	40.700	Pan_troglodytes
ENSOCUG00000023338	-	99	40.591	ENSPANG00000011201	SMG5	89	40.700	Papio_anubis
ENSOCUG00000023338	-	91	45.823	ENSPKIG00000009402	smg5	89	35.991	Paramormyrops_kingsleyae
ENSOCUG00000023338	-	97	39.912	ENSPSIG00000015198	SMG5	90	40.022	Pelodiscus_sinensis
ENSOCUG00000023338	-	91	43.970	ENSPMGG00000010465	smg5	90	33.232	Periophthalmus_magnuspinnatus
ENSOCUG00000023338	-	61	62.657	ENSPEMG00000010022	-	97	62.657	Peromyscus_maniculatus_bairdii
ENSOCUG00000023338	-	99	40.546	ENSPEMG00000001819	Smg5	89	40.765	Peromyscus_maniculatus_bairdii
ENSOCUG00000023338	-	99	40.502	ENSPCIG00000018938	SMG5	89	40.894	Phascolarctos_cinereus
ENSOCUG00000023338	-	91	46.020	ENSPFOG00000010191	smg5	75	46.020	Poecilia_formosa
ENSOCUG00000023338	-	90	46.020	ENSPLAG00000009332	smg5	77	46.020	Poecilia_latipinna
ENSOCUG00000023338	-	91	46.020	ENSPMEG00000014105	smg5	90	36.977	Poecilia_mexicana
ENSOCUG00000023338	-	84	46.020	ENSPREG00000017713	smg5	75	46.020	Poecilia_reticulata
ENSOCUG00000023338	-	99	40.481	ENSPPYG00000000723	SMG5	89	40.591	Pongo_abelii
ENSOCUG00000023338	-	74	54.494	ENSPCAG00000008412	SMG5	73	54.494	Procavia_capensis
ENSOCUG00000023338	-	99	40.479	ENSPCOG00000004741	SMG5	89	41.603	Propithecus_coquereli
ENSOCUG00000023338	-	94	44.444	ENSPVAG00000016748	SMG5	84	48.276	Pteropus_vampyrus
ENSOCUG00000023338	-	87	42.956	ENSPNYG00000013397	smg5	82	42.056	Pundamilia_nyererei
ENSOCUG00000023338	-	85	45.499	ENSPNAG00000028363	smg5	79	45.499	Pygocentrus_nattereri
ENSOCUG00000023338	-	99	40.765	ENSRNOG00000019590	Smg5	89	40.984	Rattus_norvegicus
ENSOCUG00000023338	-	99	40.591	ENSRBIG00000027428	SMG5	89	40.700	Rhinopithecus_bieti
ENSOCUG00000023338	-	99	40.700	ENSRROG00000030035	SMG5	89	40.810	Rhinopithecus_roxellana
ENSOCUG00000023338	-	99	40.087	ENSSBOG00000033339	SMG5	89	40.656	Saimiri_boliviensis_boliviensis
ENSOCUG00000023338	-	97	40.463	ENSSHAG00000014163	SMG5	90	40.573	Sarcophilus_harrisii
ENSOCUG00000023338	-	66	39.264	ENSSHAG00000000935	-	88	36.715	Sarcophilus_harrisii
ENSOCUG00000023338	-	76	36.973	ENSSHAG00000009572	-	69	36.973	Sarcophilus_harrisii
ENSOCUG00000023338	-	80	37.956	ENSSHAG00000000561	-	88	37.956	Sarcophilus_harrisii
ENSOCUG00000023338	-	92	45.301	ENSSFOG00015024175	smg5	91	34.800	Scleropages_formosus
ENSOCUG00000023338	-	88	43.571	ENSSMAG00000013059	smg5	78	43.571	Scophthalmus_maximus
ENSOCUG00000023338	-	88	43.632	ENSSDUG00000007122	smg5	78	43.632	Seriola_dumerili
ENSOCUG00000023338	-	88	43.333	ENSSLDG00000011418	smg5	78	44.048	Seriola_lalandi_dorsalis
ENSOCUG00000023338	-	98	33.923	ENSSARG00000012484	SMG5	99	34.103	Sorex_araneus
ENSOCUG00000023338	-	92	38.212	ENSSPUG00000002260	SMG5	93	38.410	Sphenodon_punctatus
ENSOCUG00000023338	-	90	45.025	ENSSPAG00000014266	smg5	89	36.570	Stegastes_partitus
ENSOCUG00000023338	-	99	40.173	ENSSSCG00000006490	-	91	40.497	Sus_scrofa
ENSOCUG00000023338	-	99	32.816	ENSSSCG00000039308	-	89	33.811	Sus_scrofa
ENSOCUG00000023338	-	59	55.787	ENSSSCG00000037182	-	92	55.787	Sus_scrofa
ENSOCUG00000023338	-	99	39.565	ENSTGUG00000003748	-	89	39.348	Taeniopygia_guttata
ENSOCUG00000023338	-	92	45.455	ENSTRUG00000012580	smg5	89	36.645	Takifugu_rubripes
ENSOCUG00000023338	-	99	36.093	ENSTNIG00000010303	smg5	90	36.547	Tetraodon_nigroviridis
ENSOCUG00000023338	-	93	39.931	ENSTTRG00000001401	SMG5	85	40.046	Tursiops_truncatus
ENSOCUG00000023338	-	99	40.261	ENSUAMG00000013721	SMG5	91	40.959	Ursus_americanus
ENSOCUG00000023338	-	97	39.612	ENSUMAG00000018041	SMG5	89	39.659	Ursus_maritimus
ENSOCUG00000023338	-	80	47.059	ENSVPAG00000009446	SMG5	76	47.059	Vicugna_pacos
ENSOCUG00000023338	-	99	40.330	ENSVVUG00000005887	SMG5	89	40.949	Vulpes_vulpes
ENSOCUG00000023338	-	73	34.864	ENSXETG00000033791	SMG5	88	35.294	Xenopus_tropicalis
ENSOCUG00000023338	-	54	48.276	ENSXCOG00000004379	smg5	54	48.276	Xiphophorus_couchianus
ENSOCUG00000023338	-	99	37.242	ENSXMAG00000013499	smg5	89	37.419	Xiphophorus_maculatus