EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000023553 (Gene tree)
Gene ID: 100354700
Gene Symbol: GFI1
Alias: -
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 7311 bases
Position: chr13:72006425-72013735
Accession: 100354700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000024678	zf-C2H2	PF00096.26	2.5e-17	1	4
ENSOCUP00000024678	zf-C2H2	PF00096.26	2.5e-17	2	4
ENSOCUP00000024678	zf-C2H2	PF00096.26	2.5e-17	3	4
ENSOCUP00000024678	zf-C2H2	PF00096.26	2.5e-17	4	4
ENSOCUP00000024678	zf-met	PF12874.7	7.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000027624	GFI1-201	1859	XM_002715863	ENSOCUP00000024678	395 (aa)	-	G1U5J6

Gene Model

Click here to download ENSOCUG00000023553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000023553's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000023553	GFI1	93	89.891	ENSG00000162676	GFI1	86	87.978	Homo_sapiens
ENSOCUG00000023553	GFI1	93	57.447	ENSAPOG00000015189	gfi1ab	98	57.796	Acanthochromis_polyacanthus
ENSOCUG00000023553	GFI1	93	57.027	ENSACIG00000016354	gfi1ab	98	56.452	Amphilophus_citrinellus
ENSOCUG00000023553	GFI1	93	47.861	ENSAOCG00000008339	gfi1ab	98	47.849	Amphiprion_ocellaris
ENSOCUG00000023553	GFI1	95	57.330	ENSAPEG00000023870	gfi1ab	98	58.333	Amphiprion_percula
ENSOCUG00000023553	GFI1	93	52.419	ENSATEG00000009167	gfi1ab	88	52.151	Anabas_testudineus
ENSOCUG00000023553	GFI1	79	70.382	ENSAPLG00000015700	GFI1	83	69.745	Anas_platyrhynchos
ENSOCUG00000023553	GFI1	93	66.313	ENSACAG00000004498	GFI1	86	66.048	Anolis_carolinensis
ENSOCUG00000023553	GFI1	93	89.071	ENSANAG00000019656	GFI1	86	87.158	Aotus_nancymaae
ENSOCUG00000023553	GFI1	93	57.527	ENSACLG00000026458	gfi1ab	91	56.989	Astatotilapia_calliptera
ENSOCUG00000023553	GFI1	65	50.388	ENSAMXG00000006669	GFI1	83	83.594	Astyanax_mexicanus
ENSOCUG00000023553	GFI1	93	53.927	ENSAMXG00000039600	gfi1ab	98	53.403	Astyanax_mexicanus
ENSOCUG00000023553	GFI1	93	89.344	ENSBTAG00000016723	GFI1	86	87.432	Bos_taurus
ENSOCUG00000023553	GFI1	93	87.158	ENSCJAG00000017609	GFI1	86	85.519	Callithrix_jacchus
ENSOCUG00000023553	GFI1	93	90.164	ENSCAFG00000020155	GFI1	86	89.071	Canis_familiaris
ENSOCUG00000023553	GFI1	93	90.164	ENSCAFG00020013371	GFI1	77	89.071	Canis_lupus_dingo
ENSOCUG00000023553	GFI1	93	89.617	ENSCHIG00000016135	GFI1	86	87.705	Capra_hircus
ENSOCUG00000023553	GFI1	93	89.617	ENSCPOG00000011727	GFI1	86	88.525	Cavia_porcellus
ENSOCUG00000023553	GFI1	93	87.978	ENSCCAG00000036072	GFI1	86	86.612	Cebus_capucinus
ENSOCUG00000023553	GFI1	93	89.344	ENSCATG00000037873	GFI1	86	88.525	Cercocebus_atys
ENSOCUG00000023553	GFI1	93	82.228	ENSCLAG00000005915	GFI1	87	81.963	Chinchilla_lanigera
ENSOCUG00000023553	GFI1	92	89.041	ENSCSAG00000001469	GFI1	100	87.123	Chlorocebus_sabaeus
ENSOCUG00000023553	GFI1	93	89.071	ENSCANG00000034077	GFI1	86	88.251	Colobus_angolensis_palliatus
ENSOCUG00000023553	GFI1	93	82.514	ENSCGRG00001015432	Gfi1	86	81.967	Cricetulus_griseus_chok1gshd
ENSOCUG00000023553	GFI1	93	51.451	ENSCSEG00000017729	GFI1	98	51.579	Cynoglossus_semilaevis
ENSOCUG00000023553	GFI1	93	54.447	ENSCVAG00000011828	gfi1ab	98	54.447	Cyprinodon_variegatus
ENSOCUG00000023553	GFI1	93	53.100	ENSCVAG00000004930	GFI1	99	52.000	Cyprinodon_variegatus
ENSOCUG00000023553	GFI1	93	59.140	ENSDARG00000044457	gfi1ab	98	59.140	Danio_rerio
ENSOCUG00000023553	GFI1	93	88.798	ENSDNOG00000000782	GFI1	84	88.798	Dasypus_novemcinctus
ENSOCUG00000023553	GFI1	93	87.738	ENSEASG00005015509	GFI1	74	87.466	Equus_asinus_asinus
ENSOCUG00000023553	GFI1	92	88.219	ENSECAG00000006647	GFI1	86	87.945	Equus_caballus
ENSOCUG00000023553	GFI1	93	82.514	ENSEEUG00000000198	GFI1	86	82.240	Erinaceus_europaeus
ENSOCUG00000023553	GFI1	93	56.915	ENSELUG00000003015	gfi1ab	98	56.649	Esox_lucius
ENSOCUG00000023553	GFI1	93	52.703	ENSELUG00000019033	GFI1	98	51.200	Esox_lucius
ENSOCUG00000023553	GFI1	93	90.984	ENSFCAG00000005914	GFI1	86	89.617	Felis_catus
ENSOCUG00000023553	GFI1	93	52.618	ENSFHEG00000000341	GFI1	99	53.457	Fundulus_heteroclitus
ENSOCUG00000023553	GFI1	93	55.703	ENSFHEG00000010997	gfi1ab	98	55.703	Fundulus_heteroclitus
ENSOCUG00000023553	GFI1	93	55.108	ENSGMOG00000007737	gfi1ab	98	55.108	Gadus_morhua
ENSOCUG00000023553	GFI1	93	68.800	ENSGALG00000043650	GFI1	86	68.267	Gallus_gallus
ENSOCUG00000023553	GFI1	93	51.562	ENSGAFG00000018063	GFI1	98	53.158	Gambusia_affinis
ENSOCUG00000023553	GFI1	93	55.438	ENSGAFG00000016637	gfi1ab	98	53.846	Gambusia_affinis
ENSOCUG00000023553	GFI1	93	57.182	ENSGACG00000004257	gfi1ab	95	57.182	Gasterosteus_aculeatus
ENSOCUG00000023553	GFI1	93	89.891	ENSGGOG00000005320	GFI1	86	87.978	Gorilla_gorilla
ENSOCUG00000023553	GFI1	93	57.453	ENSHBUG00000011969	gfi1ab	98	56.911	Haplochromis_burtoni
ENSOCUG00000023553	GFI1	93	87.432	ENSHGLG00000008020	GFI1	86	86.612	Heterocephalus_glaber_female
ENSOCUG00000023553	GFI1	93	87.432	ENSHGLG00100000610	GFI1	86	86.612	Heterocephalus_glaber_male
ENSOCUG00000023553	GFI1	93	51.359	ENSHCOG00000019555	GFI1	98	50.541	Hippocampus_comes
ENSOCUG00000023553	GFI1	93	47.704	ENSHCOG00000008590	gfi1ab	98	45.363	Hippocampus_comes
ENSOCUG00000023553	GFI1	93	55.200	ENSIPUG00000010071	gfi1ab	85	56.065	Ictalurus_punctatus
ENSOCUG00000023553	GFI1	93	49.600	ENSIPUG00000013414	GFI1	85	49.600	Ictalurus_punctatus
ENSOCUG00000023553	GFI1	93	87.432	ENSSTOG00000014583	GFI1	86	87.978	Ictidomys_tridecemlineatus
ENSOCUG00000023553	GFI1	93	56.533	ENSKMAG00000003810	gfi1ab	98	56.267	Kryptolebias_marmoratus
ENSOCUG00000023553	GFI1	93	56.300	ENSLBEG00000027776	gfi1ab	98	56.085	Labrus_bergylta
ENSOCUG00000023553	GFI1	93	73.810	ENSLACG00000017590	-	99	73.810	Latimeria_chalumnae
ENSOCUG00000023553	GFI1	93	64.439	ENSLACG00000013362	GFI1	84	64.171	Latimeria_chalumnae
ENSOCUG00000023553	GFI1	93	60.743	ENSLOCG00000004711	gfi1ab	98	60.638	Lepisosteus_oculatus
ENSOCUG00000023553	GFI1	93	83.740	ENSLAFG00000018346	GFI1	86	83.198	Loxodonta_africana
ENSOCUG00000023553	GFI1	93	89.344	ENSMFAG00000045801	GFI1	86	88.525	Macaca_fascicularis
ENSOCUG00000023553	GFI1	93	89.344	ENSMNEG00000036338	GFI1	86	88.525	Macaca_nemestrina
ENSOCUG00000023553	GFI1	93	89.344	ENSMLEG00000036181	GFI1	86	88.525	Mandrillus_leucophaeus
ENSOCUG00000023553	GFI1	93	57.067	ENSMAMG00000008125	gfi1ab	98	56.267	Mastacembelus_armatus
ENSOCUG00000023553	GFI1	93	57.796	ENSMZEG00005009895	gfi1ab	98	57.258	Maylandia_zebra
ENSOCUG00000023553	GFI1	79	71.565	ENSMGAG00000008187	GFI1	83	70.927	Meleagris_gallopavo
ENSOCUG00000023553	GFI1	93	91.257	ENSMICG00000047208	GFI1	86	89.344	Microcebus_murinus
ENSOCUG00000023553	GFI1	93	53.600	ENSMMOG00000005556	gfi1ab	98	52.800	Mola_mola
ENSOCUG00000023553	GFI1	93	75.591	ENSMODG00000011802	GFI1	87	75.733	Monodelphis_domestica
ENSOCUG00000023553	GFI1	93	57.027	ENSMALG00000014672	gfi1ab	85	54.211	Monopterus_albus
ENSOCUG00000023553	GFI1	93	83.651	MGP_CAROLIEiJ_G0027508	Gfi1	95	100.000	Mus_caroli
ENSOCUG00000023553	GFI1	93	83.924	ENSMUSG00000029275	Gfi1	87	82.834	Mus_musculus
ENSOCUG00000023553	GFI1	93	82.834	MGP_PahariEiJ_G0017280	Gfi1	95	100.000	Mus_pahari
ENSOCUG00000023553	GFI1	93	82.834	MGP_SPRETEiJ_G0028507	Gfi1	87	82.561	Mus_spretus
ENSOCUG00000023553	GFI1	93	79.508	ENSMPUG00000004178	GFI1	82	79.508	Mustela_putorius_furo
ENSOCUG00000023553	GFI1	93	85.598	ENSMLUG00000015191	GFI1	84	84.783	Myotis_lucifugus
ENSOCUG00000023553	GFI1	93	56.283	ENSNBRG00000015774	gfi1ab	98	54.450	Neolamprologus_brichardi
ENSOCUG00000023553	GFI1	85	87.463	ENSNLEG00000010470	GFI1	83	86.567	Nomascus_leucogenys
ENSOCUG00000023553	GFI1	93	91.530	ENSOPRG00000001473	GFI1	86	89.891	Ochotona_princeps
ENSOCUG00000023553	GFI1	93	56.915	ENSONIG00000019246	gfi1ab	98	56.383	Oreochromis_niloticus
ENSOCUG00000023553	GFI1	93	54.865	ENSORLG00000013806	gfi1ab	98	54.865	Oryzias_latipes
ENSOCUG00000023553	GFI1	93	53.050	ENSORLG00000005060	GFI1	98	51.989	Oryzias_latipes
ENSOCUG00000023553	GFI1	66	55.351	ENSORLG00020002817	GFI1	87	53.506	Oryzias_latipes_hni
ENSOCUG00000023553	GFI1	93	54.595	ENSORLG00020001602	gfi1ab	98	54.595	Oryzias_latipes_hni
ENSOCUG00000023553	GFI1	93	53.495	ENSORLG00015006070	GFI1	99	52.419	Oryzias_latipes_hsok
ENSOCUG00000023553	GFI1	93	53.100	ENSOMEG00000016722	GFI1	98	52.815	Oryzias_melastigma
ENSOCUG00000023553	GFI1	93	74.114	ENSOGAG00000027913	GFI1	98	61.749	Otolemur_garnettii
ENSOCUG00000023553	GFI1	61	98.077	ENSOARG00000016329	GFI1	84	98.077	Ovis_aries
ENSOCUG00000023553	GFI1	93	74.317	ENSPPAG00000042186	GFI1	98	83.832	Pan_paniscus
ENSOCUG00000023553	GFI1	93	90.984	ENSPPRG00000007521	GFI1	86	89.617	Panthera_pardus
ENSOCUG00000023553	GFI1	93	89.617	ENSPTRG00000043053	GFI1	86	87.705	Pan_troglodytes
ENSOCUG00000023553	GFI1	93	89.344	ENSPANG00000016433	GFI1	86	88.525	Papio_anubis
ENSOCUG00000023553	GFI1	93	58.466	ENSPKIG00000004263	GFI1	98	56.614	Paramormyrops_kingsleyae
ENSOCUG00000023553	GFI1	80	70.032	ENSPSIG00000008734	GFI1	81	69.401	Pelodiscus_sinensis
ENSOCUG00000023553	GFI1	93	53.514	ENSPMGG00000012546	gfi1ab	98	52.973	Periophthalmus_magnuspinnatus
ENSOCUG00000023553	GFI1	93	82.946	ENSPMGG00000011041	GFI1	56	82.946	Periophthalmus_magnuspinnatus
ENSOCUG00000023553	GFI1	93	77.807	ENSPCIG00000013728	GFI1	86	77.273	Phascolarctos_cinereus
ENSOCUG00000023553	GFI1	93	55.820	ENSPFOG00000023214	gfi1ab	98	55.556	Poecilia_formosa
ENSOCUG00000023553	GFI1	93	55.820	ENSPLAG00000010879	gfi1ab	96	73.529	Poecilia_latipinna
ENSOCUG00000023553	GFI1	93	54.960	ENSPLAG00000005376	GFI1	90	54.354	Poecilia_latipinna
ENSOCUG00000023553	GFI1	93	56.000	ENSPMEG00000013694	gfi1ab	98	55.733	Poecilia_mexicana
ENSOCUG00000023553	GFI1	93	54.354	ENSPMEG00000019299	GFI1	98	54.133	Poecilia_mexicana
ENSOCUG00000023553	GFI1	93	56.085	ENSPREG00000014097	gfi1ab	98	55.820	Poecilia_reticulata
ENSOCUG00000023553	GFI1	93	46.322	ENSPREG00000007997	GFI1	93	73.684	Poecilia_reticulata
ENSOCUG00000023553	GFI1	93	77.717	ENSPCAG00000011020	GFI1	98	76.630	Procavia_capensis
ENSOCUG00000023553	GFI1	93	89.344	ENSPCOG00000020540	GFI1	86	88.798	Propithecus_coquereli
ENSOCUG00000023553	GFI1	93	85.519	ENSPVAG00000006928	GFI1	86	85.792	Pteropus_vampyrus
ENSOCUG00000023553	GFI1	93	57.527	ENSPNYG00000021183	gfi1ab	98	56.989	Pundamilia_nyererei
ENSOCUG00000023553	GFI1	93	54.839	ENSPNAG00000027258	gfi1ab	98	54.301	Pygocentrus_nattereri
ENSOCUG00000023553	GFI1	93	50.968	ENSPNAG00000014299	-	65	50.968	Pygocentrus_nattereri
ENSOCUG00000023553	GFI1	93	48.370	ENSPNAG00000028014	GFI1	98	47.554	Pygocentrus_nattereri
ENSOCUG00000023553	GFI1	93	83.924	ENSRNOG00000002042	Gfi1	87	83.106	Rattus_norvegicus
ENSOCUG00000023553	GFI1	93	89.344	ENSRBIG00000036467	GFI1	86	88.525	Rhinopithecus_bieti
ENSOCUG00000023553	GFI1	93	89.344	ENSRROG00000031687	GFI1	86	88.525	Rhinopithecus_roxellana
ENSOCUG00000023553	GFI1	93	86.885	ENSSBOG00000031300	GFI1	86	87.158	Saimiri_boliviensis_boliviensis
ENSOCUG00000023553	GFI1	93	60.533	ENSSFOG00015020295	gfi1	98	60.267	Scleropages_formosus
ENSOCUG00000023553	GFI1	93	56.693	ENSSMAG00000002782	gfi1ab	98	55.820	Scophthalmus_maximus
ENSOCUG00000023553	GFI1	93	56.604	ENSSDUG00000022410	gfi1ab	98	56.216	Seriola_dumerili
ENSOCUG00000023553	GFI1	93	56.486	ENSSLDG00000020163	gfi1ab	98	56.486	Seriola_lalandi_dorsalis
ENSOCUG00000023553	GFI1	93	60.385	ENSSPAG00000009140	gfi1ab	98	61.417	Stegastes_partitus
ENSOCUG00000023553	GFI1	93	88.798	ENSSSCG00000006902	GFI1	86	87.705	Sus_scrofa
ENSOCUG00000023553	GFI1	79	71.474	ENSTGUG00000006060	GFI1	83	70.833	Taeniopygia_guttata
ENSOCUG00000023553	GFI1	93	54.400	ENSTRUG00000000415	gfi1ab	98	54.133	Takifugu_rubripes
ENSOCUG00000023553	GFI1	93	52.279	ENSTNIG00000000651	gfi1ab	95	54.424	Tetraodon_nigroviridis
ENSOCUG00000023553	GFI1	93	88.525	ENSTTRG00000000082	GFI1	86	86.612	Tursiops_truncatus
ENSOCUG00000023553	GFI1	93	83.924	ENSUAMG00000021124	GFI1	78	83.924	Ursus_americanus
ENSOCUG00000023553	GFI1	93	60.326	ENSXETG00000023006	gfi1	96	60.598	Xenopus_tropicalis
ENSOCUG00000023553	GFI1	93	52.987	ENSXMAG00000009274	GFI1	70	53.421	Xiphophorus_maculatus
ENSOCUG00000023553	GFI1	93	54.933	ENSXMAG00000010523	gfi1ab	98	54.667	Xiphophorus_maculatus