EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000023609 (Gene tree)
Gene ID: 100358757
Gene Symbol: POLR2J
Alias: -
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 5007 bases
Position: chrGL019215:78875-83881
Accession: 9197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000016720	RNA_pol_L_2	PF13656.6	2.7e-29	1	1
ENSOCUP00000016720	RNA_pol_L	PF01193.24	2.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000023814	POLR2J-201	587	-	ENSOCUP00000016720	127 (aa)	-	G1TIF1

Gene Model

Click here to download ENSOCUG00000023609's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03020	RNA polymerase	KEGG
ocu05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000023609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000023609	POLR2J	74	31.959	ENSOCUG00000015706	POLR1D	60	31.959

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000023609	POLR2J	100	92.126	ENSG00000005075	POLR2J	100	92.126	Homo_sapiens
ENSOCUG00000023609	POLR2J	93	92.373	ENSG00000228049	POLR2J2	96	94.595	Homo_sapiens
ENSOCUG00000023609	POLR2J	100	87.402	ENSAPOG00000019538	polr2j	100	87.402	Acanthochromis_polyacanthus
ENSOCUG00000023609	POLR2J	100	92.913	ENSAMEG00000015480	-	100	92.913	Ailuropoda_melanoleuca
ENSOCUG00000023609	POLR2J	83	71.963	ENSACIG00000014549	POLR2J2	88	71.963	Amphilophus_citrinellus
ENSOCUG00000023609	POLR2J	100	86.614	ENSAOCG00000006937	polr2j	100	86.614	Amphiprion_ocellaris
ENSOCUG00000023609	POLR2J	100	87.402	ENSAPEG00000021761	polr2j	100	87.402	Amphiprion_percula
ENSOCUG00000023609	POLR2J	100	87.402	ENSATEG00000009731	polr2j	100	87.402	Anabas_testudineus
ENSOCUG00000023609	POLR2J	100	87.402	ENSATEG00000013312	-	100	87.402	Anabas_testudineus
ENSOCUG00000023609	POLR2J	87	89.189	ENSAPLG00000003744	-	100	89.189	Anas_platyrhynchos
ENSOCUG00000023609	POLR2J	100	83.465	ENSACAG00000000251	POLR2J	100	83.465	Anolis_carolinensis
ENSOCUG00000023609	POLR2J	100	87.402	ENSACLG00000014564	polr2j	100	87.402	Astatotilapia_calliptera
ENSOCUG00000023609	POLR2J	100	88.976	ENSAMXG00000007517	polr2j	100	88.976	Astyanax_mexicanus
ENSOCUG00000023609	POLR2J	57	68.493	ENSBTAG00000048046	-	61	68.493	Bos_taurus
ENSOCUG00000023609	POLR2J	82	71.154	WBGene00012187	rpb-11	84	71.154	Caenorhabditis_elegans
ENSOCUG00000023609	POLR2J	100	92.126	ENSCJAG00000016203	-	100	92.126	Callithrix_jacchus
ENSOCUG00000023609	POLR2J	100	92.126	ENSCAFG00000013683	-	100	92.126	Canis_familiaris
ENSOCUG00000023609	POLR2J	86	90.826	ENSTSYG00000029243	-	85	90.826	Carlito_syrichta
ENSOCUG00000023609	POLR2J	100	92.126	ENSCPOG00000001401	-	100	92.126	Cavia_porcellus
ENSOCUG00000023609	POLR2J	100	68.504	ENSCATG00000016595	-	97	77.451	Cercocebus_atys
ENSOCUG00000023609	POLR2J	100	92.126	ENSCLAG00000005238	-	100	92.126	Chinchilla_lanigera
ENSOCUG00000023609	POLR2J	100	92.126	ENSCSAG00000018092	-	100	92.126	Chlorocebus_sabaeus
ENSOCUG00000023609	POLR2J	100	74.803	ENSCING00000020531	-	100	74.803	Ciona_intestinalis
ENSOCUG00000023609	POLR2J	100	74.803	ENSCSAVG00000006948	-	100	74.803	Ciona_savignyi
ENSOCUG00000023609	POLR2J	100	92.126	ENSCGRG00001012814	Polr2j	100	92.126	Cricetulus_griseus_chok1gshd
ENSOCUG00000023609	POLR2J	100	77.953	ENSCGRG00000008433	Polr2j	100	77.953	Cricetulus_griseus_crigri
ENSOCUG00000023609	POLR2J	100	86.614	ENSCSEG00000020352	polr2j	100	86.614	Cynoglossus_semilaevis
ENSOCUG00000023609	POLR2J	100	86.614	ENSCVAG00000014267	polr2j	100	86.614	Cyprinodon_variegatus
ENSOCUG00000023609	POLR2J	100	88.189	ENSDARG00000035146	polr2j	100	88.189	Danio_rerio
ENSOCUG00000023609	POLR2J	100	92.126	ENSDORG00000005934	Polr2j	100	92.126	Dipodomys_ordii
ENSOCUG00000023609	POLR2J	98	72.000	FBgn0032634	Rpb11	98	72.000	Drosophila_melanogaster
ENSOCUG00000023609	POLR2J	100	59.055	ENSEBUG00000016100	polr2j	100	59.055	Eptatretus_burgeri
ENSOCUG00000023609	POLR2J	100	92.126	ENSEASG00005016864	-	100	92.126	Equus_asinus_asinus
ENSOCUG00000023609	POLR2J	100	88.189	ENSELUG00000012822	polr2j	100	88.189	Esox_lucius
ENSOCUG00000023609	POLR2J	100	92.126	ENSFCAG00000000377	-	100	92.126	Felis_catus
ENSOCUG00000023609	POLR2J	100	92.126	ENSFALG00000009523	POLR2J	100	92.126	Ficedula_albicollis
ENSOCUG00000023609	POLR2J	100	92.126	ENSFDAG00000010507	-	100	92.126	Fukomys_damarensis
ENSOCUG00000023609	POLR2J	100	87.402	ENSFHEG00000006625	polr2j	100	87.402	Fundulus_heteroclitus
ENSOCUG00000023609	POLR2J	100	87.402	ENSGMOG00000018207	polr2j	100	87.402	Gadus_morhua
ENSOCUG00000023609	POLR2J	100	92.126	ENSGALG00000030808	-	100	92.126	Gallus_gallus
ENSOCUG00000023609	POLR2J	100	87.402	ENSGAFG00000019555	polr2j	100	87.402	Gambusia_affinis
ENSOCUG00000023609	POLR2J	100	87.402	ENSGACG00000003310	polr2j	100	87.402	Gasterosteus_aculeatus
ENSOCUG00000023609	POLR2J	97	82.927	ENSGAGG00000018304	-	96	82.927	Gopherus_agassizii
ENSOCUG00000023609	POLR2J	87	86.364	ENSGGOG00000004519	-	80	86.364	Gorilla_gorilla
ENSOCUG00000023609	POLR2J	100	87.402	ENSHBUG00000008467	polr2j	100	87.402	Haplochromis_burtoni
ENSOCUG00000023609	POLR2J	100	92.126	ENSHGLG00000013598	POLR2J	99	99.083	Heterocephalus_glaber_female
ENSOCUG00000023609	POLR2J	100	92.126	ENSHGLG00100011242	POLR2J	99	99.083	Heterocephalus_glaber_male
ENSOCUG00000023609	POLR2J	100	87.402	ENSHCOG00000014827	polr2j	68	87.402	Hippocampus_comes
ENSOCUG00000023609	POLR2J	100	88.976	ENSIPUG00000023960	polr2j	100	88.976	Ictalurus_punctatus
ENSOCUG00000023609	POLR2J	100	92.126	ENSSTOG00000006377	POLR2J	98	99.091	Ictidomys_tridecemlineatus
ENSOCUG00000023609	POLR2J	100	92.126	ENSJJAG00000013854	-	100	92.126	Jaculus_jaculus
ENSOCUG00000023609	POLR2J	100	87.402	ENSJJAG00000018834	-	100	87.402	Jaculus_jaculus
ENSOCUG00000023609	POLR2J	100	87.402	ENSKMAG00000014581	polr2j	79	87.402	Kryptolebias_marmoratus
ENSOCUG00000023609	POLR2J	100	87.402	ENSLBEG00000005885	polr2j	100	87.402	Labrus_bergylta
ENSOCUG00000023609	POLR2J	100	88.976	ENSLOCG00000001885	polr2j	89	88.976	Lepisosteus_oculatus
ENSOCUG00000023609	POLR2J	100	92.126	ENSLAFG00000021507	-	100	92.126	Loxodonta_africana
ENSOCUG00000023609	POLR2J	100	90.909	ENSMMUG00000012019	POLR2J	100	90.909	Macaca_mulatta
ENSOCUG00000023609	POLR2J	100	87.402	ENSMAMG00000009374	polr2j	100	87.402	Mastacembelus_armatus
ENSOCUG00000023609	POLR2J	100	87.402	ENSMZEG00005011932	polr2j	100	87.402	Maylandia_zebra
ENSOCUG00000023609	POLR2J	100	92.126	ENSMGAG00000003534	POLR2J	100	92.126	Meleagris_gallopavo
ENSOCUG00000023609	POLR2J	100	92.126	ENSMAUG00000013049	Polr2j	100	92.126	Mesocricetus_auratus
ENSOCUG00000023609	POLR2J	71	96.667	ENSMICG00000026811	-	91	96.667	Microcebus_murinus
ENSOCUG00000023609	POLR2J	100	92.126	ENSMOCG00000001294	Polr2j	100	92.126	Microtus_ochrogaster
ENSOCUG00000023609	POLR2J	100	86.614	ENSMMOG00000013265	polr2j	100	86.614	Mola_mola
ENSOCUG00000023609	POLR2J	100	93.750	ENSMODG00000013617	-	100	93.750	Monodelphis_domestica
ENSOCUG00000023609	POLR2J	100	87.402	ENSMALG00000020749	polr2j	100	87.402	Monopterus_albus
ENSOCUG00000023609	POLR2J	100	92.126	MGP_CAROLIEiJ_G0027851	Polr2j	99	99.091	Mus_caroli
ENSOCUG00000023609	POLR2J	100	92.126	ENSMUSG00000039771	Polr2j	99	99.091	Mus_musculus
ENSOCUG00000023609	POLR2J	100	92.126	MGP_PahariEiJ_G0024434	Polr2j	100	92.126	Mus_pahari
ENSOCUG00000023609	POLR2J	100	92.126	MGP_SPRETEiJ_G0028853	Polr2j	99	99.091	Mus_spretus
ENSOCUG00000023609	POLR2J	100	92.126	ENSMLUG00000010467	POLR2J	100	92.126	Myotis_lucifugus
ENSOCUG00000023609	POLR2J	100	92.126	ENSNGAG00000023412	Polr2j	98	99.091	Nannospalax_galili
ENSOCUG00000023609	POLR2J	61	90.909	ENSNBRG00000006580	polr2j	59	90.909	Neolamprologus_brichardi
ENSOCUG00000023609	POLR2J	100	70.866	ENSODEG00000008559	-	100	70.866	Octodon_degus
ENSOCUG00000023609	POLR2J	100	92.126	ENSODEG00000015648	-	96	100.000	Octodon_degus
ENSOCUG00000023609	POLR2J	100	87.402	ENSONIG00000000259	polr2j	100	87.402	Oreochromis_niloticus
ENSOCUG00000023609	POLR2J	100	89.764	ENSOANG00000020912	POLR2J	100	89.764	Ornithorhynchus_anatinus
ENSOCUG00000023609	POLR2J	100	87.402	ENSORLG00000029046	polr2j	83	87.402	Oryzias_latipes
ENSOCUG00000023609	POLR2J	100	87.402	ENSORLG00020007625	polr2j	83	87.402	Oryzias_latipes_hni
ENSOCUG00000023609	POLR2J	100	87.402	ENSORLG00015003457	polr2j	83	87.402	Oryzias_latipes_hsok
ENSOCUG00000023609	POLR2J	100	86.614	ENSOMEG00000002097	polr2j	100	86.614	Oryzias_melastigma
ENSOCUG00000023609	POLR2J	100	73.438	ENSOGAG00000008250	-	100	73.438	Otolemur_garnettii
ENSOCUG00000023609	POLR2J	100	92.126	ENSOARG00000014204	-	98	92.126	Ovis_aries
ENSOCUG00000023609	POLR2J	100	92.126	ENSPPRG00000012439	-	100	92.126	Panthera_pardus
ENSOCUG00000023609	POLR2J	98	83.871	ENSPTIG00000018714	-	100	88.496	Panthera_tigris_altaica
ENSOCUG00000023609	POLR2J	87	90.000	ENSPSIG00000010173	-	100	90.000	Pelodiscus_sinensis
ENSOCUG00000023609	POLR2J	100	87.402	ENSPMGG00000021256	polr2j	100	87.402	Periophthalmus_magnuspinnatus
ENSOCUG00000023609	POLR2J	100	92.126	ENSPEMG00000015733	Polr2j	100	92.126	Peromyscus_maniculatus_bairdii
ENSOCUG00000023609	POLR2J	100	92.126	ENSPCIG00000009026	-	100	92.126	Phascolarctos_cinereus
ENSOCUG00000023609	POLR2J	100	87.402	ENSPFOG00000012001	polr2j	99	87.402	Poecilia_formosa
ENSOCUG00000023609	POLR2J	100	87.402	ENSPLAG00000014075	polr2j	100	87.402	Poecilia_latipinna
ENSOCUG00000023609	POLR2J	100	87.402	ENSPMEG00000020585	polr2j	100	87.402	Poecilia_mexicana
ENSOCUG00000023609	POLR2J	100	87.402	ENSPREG00000015255	polr2j	100	87.402	Poecilia_reticulata
ENSOCUG00000023609	POLR2J	100	92.126	ENSPCOG00000024573	-	100	92.126	Propithecus_coquereli
ENSOCUG00000023609	POLR2J	87	99.091	ENSPVAG00000017770	-	63	99.091	Pteropus_vampyrus
ENSOCUG00000023609	POLR2J	100	87.402	ENSPNYG00000014832	polr2j	100	87.402	Pundamilia_nyererei
ENSOCUG00000023609	POLR2J	100	86.614	ENSPNAG00000016595	polr2j	100	86.614	Pygocentrus_nattereri
ENSOCUG00000023609	POLR2J	100	92.126	ENSRNOG00000001430	Polr2j	100	92.126	Rattus_norvegicus
ENSOCUG00000023609	POLR2J	100	92.126	ENSSBOG00000025579	-	100	92.126	Saimiri_boliviensis_boliviensis
ENSOCUG00000023609	POLR2J	62	87.342	ENSSHAG00000010443	-	81	87.342	Sarcophilus_harrisii
ENSOCUG00000023609	POLR2J	84	96.262	ENSSFOG00015003371	polr2j	81	96.262	Scleropages_formosus
ENSOCUG00000023609	POLR2J	100	87.402	ENSSMAG00000006729	polr2j	100	87.402	Scophthalmus_maximus
ENSOCUG00000023609	POLR2J	100	87.402	ENSSDUG00000018490	polr2j	100	87.402	Seriola_dumerili
ENSOCUG00000023609	POLR2J	100	87.402	ENSSLDG00000022354	polr2j	100	87.402	Seriola_lalandi_dorsalis
ENSOCUG00000023609	POLR2J	100	92.126	ENSSPUG00000010802	-	100	92.126	Sphenodon_punctatus
ENSOCUG00000023609	POLR2J	100	87.402	ENSSPAG00000021953	polr2j	100	87.402	Stegastes_partitus
ENSOCUG00000023609	POLR2J	100	92.126	ENSSSCG00000007688	-	100	92.126	Sus_scrofa
ENSOCUG00000023609	POLR2J	100	76.378	ENSSSCG00000003703	-	83	76.378	Sus_scrofa
ENSOCUG00000023609	POLR2J	87	90.000	ENSTGUG00000004501	-	100	90.000	Taeniopygia_guttata
ENSOCUG00000023609	POLR2J	62	87.342	ENSTGUG00000004510	-	100	87.342	Taeniopygia_guttata
ENSOCUG00000023609	POLR2J	100	88.189	ENSTRUG00000020842	polr2j	100	88.189	Takifugu_rubripes
ENSOCUG00000023609	POLR2J	100	87.402	ENSTNIG00000002994	polr2j	100	87.402	Tetraodon_nigroviridis
ENSOCUG00000023609	POLR2J	89	78.761	ENSTBEG00000005797	-	74	78.761	Tupaia_belangeri
ENSOCUG00000023609	POLR2J	100	92.126	ENSUAMG00000011310	-	100	92.126	Ursus_americanus
ENSOCUG00000023609	POLR2J	100	92.126	ENSUMAG00000012594	-	100	92.126	Ursus_maritimus
ENSOCUG00000023609	POLR2J	100	90.551	ENSXETG00000001108	polr2j	100	90.551	Xenopus_tropicalis
ENSOCUG00000023609	POLR2J	100	87.402	ENSXMAG00000012422	polr2j	100	87.402	Xiphophorus_maculatus