EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000023761 (Gene tree)
Gene ID: 100343057
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 5276 bases
Position: chr9:62944448-62949723
Accession: 100343057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000019675	LSM	PF01423.22	4.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000021858	-	354	XM_008261131	ENSOCUP00000019675	117 (aa)	XP_008259353	G1TRL8

Gene Model

Click here to download ENSOCUG00000023761's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03040	Spliceosome	KEGG
ocu05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000023761's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000023761	-	52	36.066	ENSOCUG00000005333	LSM10	58	33.803
ENSOCUG00000023761	-	100	97.436	ENSOCUG00000014399	-	98	97.436
ENSOCUG00000023761	-	59	33.803	ENSOCUG00000002583	LSM2	75	33.803

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000023761	-	100	98.291	ENSG00000167088	SNRPD1	100	100.000	Homo_sapiens
ENSOCUG00000023761	-	98	96.522	ENSAPOG00000019446	snrpd1	63	96.522	Acanthochromis_polyacanthus
ENSOCUG00000023761	-	100	100.000	ENSAMEG00000002576	SNRPD1	100	100.000	Ailuropoda_melanoleuca
ENSOCUG00000023761	-	96	96.429	ENSACIG00000011263	snrpd1	100	96.429	Amphilophus_citrinellus
ENSOCUG00000023761	-	100	94.872	ENSAOCG00000007406	snrpd1	98	94.872	Amphiprion_ocellaris
ENSOCUG00000023761	-	100	90.598	ENSAPEG00000014961	snrpd1	98	90.598	Amphiprion_percula
ENSOCUG00000023761	-	96	96.429	ENSAPEG00000012539	SNRPD1	100	96.429	Amphiprion_percula
ENSOCUG00000023761	-	100	94.872	ENSATEG00000014399	snrpd1	100	96.429	Anabas_testudineus
ENSOCUG00000023761	-	98	100.000	ENSAPLG00000012256	SNRPD1	97	100.000	Anas_platyrhynchos
ENSOCUG00000023761	-	100	98.291	ENSACAG00000006364	SNRPD1	98	98.291	Anolis_carolinensis
ENSOCUG00000023761	-	100	98.291	ENSANAG00000025641	SNRPD1	98	98.291	Aotus_nancymaae
ENSOCUG00000023761	-	96	96.429	ENSACLG00000017406	snrpd1	100	96.429	Astatotilapia_calliptera
ENSOCUG00000023761	-	100	95.726	ENSAMXG00000004589	snrpd1	98	95.726	Astyanax_mexicanus
ENSOCUG00000023761	-	100	95.726	ENSBTAG00000047266	-	98	95.726	Bos_taurus
ENSOCUG00000023761	-	100	98.291	ENSBTAG00000008292	SNRPD1	98	98.291	Bos_taurus
ENSOCUG00000023761	-	97	94.690	ENSBTAG00000012376	-	84	94.690	Bos_taurus
ENSOCUG00000023761	-	97	90.351	ENSBTAG00000055316	-	91	90.351	Bos_taurus
ENSOCUG00000023761	-	74	77.907	WBGene00004916	snr-3	75	73.404	Caenorhabditis_elegans
ENSOCUG00000023761	-	100	98.291	ENSCJAG00000042955	SNRPD1	98	98.291	Callithrix_jacchus
ENSOCUG00000023761	-	100	98.291	ENSCAFG00000018247	SNRPD1	98	98.291	Canis_familiaris
ENSOCUG00000023761	-	78	100.000	ENSCAFG00020015914	SNRPD1	71	100.000	Canis_lupus_dingo
ENSOCUG00000023761	-	100	99.145	ENSCHIG00000005557	SNRPD1	98	99.145	Capra_hircus
ENSOCUG00000023761	-	100	98.291	ENSTSYG00000030028	SNRPD1	98	98.291	Carlito_syrichta
ENSOCUG00000023761	-	99	98.276	ENSCAPG00000008103	SNRPD1	100	98.276	Cavia_aperea
ENSOCUG00000023761	-	100	98.291	ENSCPOG00000004679	SNRPD1	100	98.276	Cavia_porcellus
ENSOCUG00000023761	-	100	97.436	ENSCCAG00000020611	-	98	97.436	Cebus_capucinus
ENSOCUG00000023761	-	100	98.291	ENSCCAG00000032658	SNRPD1	98	98.291	Cebus_capucinus
ENSOCUG00000023761	-	100	94.872	ENSCCAG00000016652	-	98	94.872	Cebus_capucinus
ENSOCUG00000023761	-	80	93.617	ENSCCAG00000005390	-	79	93.617	Cebus_capucinus
ENSOCUG00000023761	-	100	98.291	ENSCATG00000039978	SNRPD1	98	98.291	Cercocebus_atys
ENSOCUG00000023761	-	100	98.291	ENSCLAG00000008691	SNRPD1	98	98.291	Chinchilla_lanigera
ENSOCUG00000023761	-	100	98.291	ENSCSAG00000017654	SNRPD1	98	98.291	Chlorocebus_sabaeus
ENSOCUG00000023761	-	100	98.291	ENSCPBG00000023143	SNRPD1	98	98.291	Chrysemys_picta_bellii
ENSOCUG00000023761	-	70	87.805	ENSCING00000024100	-	66	87.805	Ciona_intestinalis
ENSOCUG00000023761	-	71	85.542	ENSCSAVG00000004578	-	66	85.542	Ciona_savignyi
ENSOCUG00000023761	-	80	73.404	ENSCGRG00001009945	-	83	73.404	Cricetulus_griseus_chok1gshd
ENSOCUG00000023761	-	100	100.000	ENSCGRG00001021055	-	98	98.291	Cricetulus_griseus_chok1gshd
ENSOCUG00000023761	-	100	100.000	ENSCGRG00000000490	-	98	98.291	Cricetulus_griseus_crigri
ENSOCUG00000023761	-	80	73.404	ENSCGRG00000006224	-	83	73.404	Cricetulus_griseus_crigri
ENSOCUG00000023761	-	79	92.473	ENSCSEG00000018141	snrpd1	79	92.553	Cynoglossus_semilaevis
ENSOCUG00000023761	-	100	94.872	ENSCVAG00000000534	snrpd1	98	94.872	Cyprinodon_variegatus
ENSOCUG00000023761	-	100	95.726	ENSDARG00000011648	snrpd1	98	95.726	Danio_rerio
ENSOCUG00000023761	-	100	98.291	ENSDNOG00000040310	SNRPD1	98	98.291	Dasypus_novemcinctus
ENSOCUG00000023761	-	100	98.291	ENSDORG00000008349	Snrpd1	98	98.291	Dipodomys_ordii
ENSOCUG00000023761	-	79	80.435	FBgn0261933	SmD1	74	80.435	Drosophila_melanogaster
ENSOCUG00000023761	-	75	100.000	ENSETEG00000011689	SNRPD1	74	100.000	Echinops_telfairi
ENSOCUG00000023761	-	94	90.909	ENSEBUG00000003170	snrpd1	92	90.909	Eptatretus_burgeri
ENSOCUG00000023761	-	96	100.000	ENSEASG00005002433	SNRPD1	100	100.000	Equus_asinus_asinus
ENSOCUG00000023761	-	96	100.000	ENSECAG00000014373	SNRPD1	100	100.000	Equus_caballus
ENSOCUG00000023761	-	76	100.000	ENSEEUG00000004987	SNRPD1	100	100.000	Erinaceus_europaeus
ENSOCUG00000023761	-	93	83.486	ENSELUG00000000088	snrpd1	76	95.556	Esox_lucius
ENSOCUG00000023761	-	100	98.291	ENSFCAG00000012352	SNRPD1	98	98.291	Felis_catus
ENSOCUG00000023761	-	96	100.000	ENSFALG00000002646	SNRPD1	100	100.000	Ficedula_albicollis
ENSOCUG00000023761	-	100	95.726	ENSGMOG00000015607	snrpd1	98	95.726	Gadus_morhua
ENSOCUG00000023761	-	100	98.291	ENSGALG00000041334	SNRPD1	98	98.291	Gallus_gallus
ENSOCUG00000023761	-	100	94.872	ENSGAFG00000011171	snrpd1	98	94.872	Gambusia_affinis
ENSOCUG00000023761	-	100	95.726	ENSGACG00000005201	SNRPD1	98	95.726	Gasterosteus_aculeatus
ENSOCUG00000023761	-	100	98.291	ENSGAGG00000011197	SNRPD1	98	98.291	Gopherus_agassizii
ENSOCUG00000023761	-	100	98.291	ENSGGOG00000041053	SNRPD1	98	98.291	Gorilla_gorilla
ENSOCUG00000023761	-	80	92.553	ENSGGOG00000026706	-	78	92.553	Gorilla_gorilla
ENSOCUG00000023761	-	100	94.872	ENSHBUG00000003236	snrpd1	98	94.872	Haplochromis_burtoni
ENSOCUG00000023761	-	100	98.291	ENSHGLG00000007152	SNRPD1	98	98.291	Heterocephalus_glaber_female
ENSOCUG00000023761	-	100	98.291	ENSHGLG00100008618	SNRPD1	98	98.291	Heterocephalus_glaber_male
ENSOCUG00000023761	-	100	94.872	ENSIPUG00000003576	snrpd1	98	94.872	Ictalurus_punctatus
ENSOCUG00000023761	-	100	98.291	ENSSTOG00000000485	SNRPD1	97	100.000	Ictidomys_tridecemlineatus
ENSOCUG00000023761	-	100	98.291	ENSJJAG00000017698	Snrpd1	98	98.291	Jaculus_jaculus
ENSOCUG00000023761	-	100	94.872	ENSKMAG00000005987	snrpd1	98	94.872	Kryptolebias_marmoratus
ENSOCUG00000023761	-	100	94.872	ENSLBEG00000003327	snrpd1	98	94.872	Labrus_bergylta
ENSOCUG00000023761	-	100	98.291	ENSLACG00000001955	SNRPD1	98	98.291	Latimeria_chalumnae
ENSOCUG00000023761	-	100	96.581	ENSLOCG00000002003	snrpd1	100	96.581	Lepisosteus_oculatus
ENSOCUG00000023761	-	100	99.145	ENSLAFG00000005819	SNRPD1	99	99.145	Loxodonta_africana
ENSOCUG00000023761	-	100	98.291	ENSMFAG00000042080	SNRPD1	98	98.291	Macaca_fascicularis
ENSOCUG00000023761	-	97	100.000	ENSMMUG00000003992	SNRPD1	97	100.000	Macaca_mulatta
ENSOCUG00000023761	-	100	98.291	ENSMNEG00000041296	SNRPD1	98	98.291	Macaca_nemestrina
ENSOCUG00000023761	-	100	99.145	ENSMLEG00000028659	SNRPD1	98	98.291	Mandrillus_leucophaeus
ENSOCUG00000023761	-	100	94.872	ENSMAMG00000012971	snrpd1	98	94.872	Mastacembelus_armatus
ENSOCUG00000023761	-	100	94.872	ENSMZEG00005004685	snrpd1	98	94.872	Maylandia_zebra
ENSOCUG00000023761	-	98	100.000	ENSMGAG00000011598	SNRPD1	95	100.000	Meleagris_gallopavo
ENSOCUG00000023761	-	85	94.949	ENSMAUG00000006829	-	63	94.949	Mesocricetus_auratus
ENSOCUG00000023761	-	80	81.915	ENSMAUG00000016502	-	85	81.915	Mesocricetus_auratus
ENSOCUG00000023761	-	80	81.915	ENSMAUG00000016467	-	85	81.915	Mesocricetus_auratus
ENSOCUG00000023761	-	100	98.291	ENSMICG00000044066	SNRPD1	98	98.291	Microcebus_murinus
ENSOCUG00000023761	-	100	98.291	ENSMOCG00000017367	Snrpd1	98	98.291	Microtus_ochrogaster
ENSOCUG00000023761	-	100	94.872	ENSMMOG00000019089	snrpd1	98	94.872	Mola_mola
ENSOCUG00000023761	-	100	98.291	ENSMODG00000021487	SNRPD1	98	100.000	Monodelphis_domestica
ENSOCUG00000023761	-	100	94.872	ENSMALG00000014459	snrpd1	98	94.872	Monopterus_albus
ENSOCUG00000023761	-	100	98.291	MGP_CAROLIEiJ_G0021994	Snrpd1	98	98.291	Mus_caroli
ENSOCUG00000023761	-	100	98.291	ENSMUSG00000002477	Snrpd1	98	98.291	Mus_musculus
ENSOCUG00000023761	-	100	98.291	MGP_PahariEiJ_G0018731	Snrpd1	98	98.291	Mus_pahari
ENSOCUG00000023761	-	100	98.291	MGP_SPRETEiJ_G0022910	Snrpd1	98	98.291	Mus_spretus
ENSOCUG00000023761	-	100	97.436	ENSMPUG00000020041	-	98	97.436	Mustela_putorius_furo
ENSOCUG00000023761	-	100	100.000	ENSMPUG00000005567	-	100	100.000	Mustela_putorius_furo
ENSOCUG00000023761	-	99	97.414	ENSMLUG00000009124	SNRPD1	90	97.414	Myotis_lucifugus
ENSOCUG00000023761	-	100	98.291	ENSNGAG00000023946	Snrpd1	98	98.291	Nannospalax_galili
ENSOCUG00000023761	-	77	95.556	ENSNBRG00000012119	snrpd1	74	95.556	Neolamprologus_brichardi
ENSOCUG00000023761	-	100	95.726	ENSNLEG00000031430	SNRPD1	98	95.726	Nomascus_leucogenys
ENSOCUG00000023761	-	100	98.291	ENSODEG00000005764	SNRPD1	98	98.291	Octodon_degus
ENSOCUG00000023761	-	100	94.872	ENSONIG00000002486	snrpd1	98	94.872	Oreochromis_niloticus
ENSOCUG00000023761	-	84	88.776	ENSOANG00000004638	-	82	88.776	Ornithorhynchus_anatinus
ENSOCUG00000023761	-	96	96.429	ENSORLG00000012516	snrpd1	100	96.429	Oryzias_latipes
ENSOCUG00000023761	-	100	94.872	ENSORLG00020005743	snrpd1	98	94.872	Oryzias_latipes_hni
ENSOCUG00000023761	-	100	94.872	ENSORLG00015013402	snrpd1	98	94.872	Oryzias_latipes_hsok
ENSOCUG00000023761	-	100	94.872	ENSOMEG00000011571	snrpd1	98	94.872	Oryzias_melastigma
ENSOCUG00000023761	-	100	99.145	ENSOGAG00000007833	SNRPD1	98	99.145	Otolemur_garnettii
ENSOCUG00000023761	-	100	93.162	ENSOARG00000003413	-	83	93.162	Ovis_aries
ENSOCUG00000023761	-	100	98.291	ENSPPAG00000042593	SNRPD1	98	98.291	Pan_paniscus
ENSOCUG00000023761	-	80	64.894	ENSPPRG00000005009	-	88	71.296	Panthera_pardus
ENSOCUG00000023761	-	100	98.291	ENSPPRG00000002399	SNRPD1	98	98.291	Panthera_pardus
ENSOCUG00000023761	-	97	100.000	ENSPTIG00000013206	SNRPD1	100	100.000	Panthera_tigris_altaica
ENSOCUG00000023761	-	100	98.291	ENSPTRG00000009909	SNRPD1	98	98.291	Pan_troglodytes
ENSOCUG00000023761	-	85	92.000	ENSPTRG00000050159	-	85	92.000	Pan_troglodytes
ENSOCUG00000023761	-	100	98.291	ENSPANG00000023478	SNRPD1	98	98.291	Papio_anubis
ENSOCUG00000023761	-	100	95.726	ENSPKIG00000003985	SNRPD1	98	95.726	Paramormyrops_kingsleyae
ENSOCUG00000023761	-	90	95.238	ENSPKIG00000021610	snrpd1	94	95.238	Paramormyrops_kingsleyae
ENSOCUG00000023761	-	100	94.872	ENSPMGG00000001862	snrpd1	98	94.872	Periophthalmus_magnuspinnatus
ENSOCUG00000023761	-	100	100.000	ENSPEMG00000014773	-	98	98.291	Peromyscus_maniculatus_bairdii
ENSOCUG00000023761	-	85	81.373	ENSPMAG00000003938	-	84	81.373	Petromyzon_marinus
ENSOCUG00000023761	-	100	98.291	ENSPCIG00000020320	SNRPD1	100	100.000	Phascolarctos_cinereus
ENSOCUG00000023761	-	80	93.617	ENSPFOG00000012448	SNRPD1	83	93.617	Poecilia_formosa
ENSOCUG00000023761	-	80	93.617	ENSPLAG00000006738	snrpd1	83	93.617	Poecilia_latipinna
ENSOCUG00000023761	-	80	93.617	ENSPMEG00000021942	snrpd1	83	93.617	Poecilia_mexicana
ENSOCUG00000023761	-	100	94.872	ENSPREG00000007094	snrpd1	98	94.872	Poecilia_reticulata
ENSOCUG00000023761	-	100	98.291	ENSPPYG00000025874	SNRPD1	98	98.291	Pongo_abelii
ENSOCUG00000023761	-	100	98.291	ENSPCOG00000013327	SNRPD1	98	98.291	Propithecus_coquereli
ENSOCUG00000023761	-	100	98.291	ENSPVAG00000005511	SNRPD1	79	98.291	Pteropus_vampyrus
ENSOCUG00000023761	-	100	94.872	ENSPNAG00000017824	snrpd1	98	94.872	Pygocentrus_nattereri
ENSOCUG00000023761	-	100	98.291	ENSRNOG00000013714	Snrpd1	98	98.291	Rattus_norvegicus
ENSOCUG00000023761	-	100	99.145	ENSRBIG00000022996	SNRPD1	98	98.291	Rhinopithecus_bieti
ENSOCUG00000023761	-	100	99.145	ENSRROG00000027640	SNRPD1	98	98.291	Rhinopithecus_roxellana
ENSOCUG00000023761	-	100	98.291	ENSSBOG00000020998	SNRPD1	98	98.291	Saimiri_boliviensis_boliviensis
ENSOCUG00000023761	-	100	98.291	ENSSHAG00000011791	SNRPD1	98	98.291	Sarcophilus_harrisii
ENSOCUG00000023761	-	94	93.636	ENSSFOG00015008809	-	92	93.636	Scleropages_formosus
ENSOCUG00000023761	-	94	93.636	ENSSFOG00015022253	-	92	93.636	Scleropages_formosus
ENSOCUG00000023761	-	94	93.636	ENSSMAG00000008765	snrpd1	94	95.238	Scophthalmus_maximus
ENSOCUG00000023761	-	92	95.370	ENSSDUG00000010521	snrpd1	92	95.370	Seriola_dumerili
ENSOCUG00000023761	-	100	94.872	ENSSLDG00000011858	snrpd1	98	94.872	Seriola_lalandi_dorsalis
ENSOCUG00000023761	-	57	100.000	ENSSARG00000004271	SNRPD1	100	100.000	Sorex_araneus
ENSOCUG00000023761	-	100	98.291	ENSSPUG00000002824	SNRPD1	98	98.291	Sphenodon_punctatus
ENSOCUG00000023761	-	96	96.429	ENSSPAG00000015229	snrpd1	100	96.429	Stegastes_partitus
ENSOCUG00000023761	-	100	98.291	ENSSSCG00000003701	SNRPD1	100	100.000	Sus_scrofa
ENSOCUG00000023761	-	98	100.000	ENSTGUG00000005095	SNRPD1	97	100.000	Taeniopygia_guttata
ENSOCUG00000023761	-	96	96.429	ENSTRUG00000008977	snrpd1	100	96.429	Takifugu_rubripes
ENSOCUG00000023761	-	82	91.667	ENSTNIG00000001224	snrpd1	92	91.667	Tetraodon_nigroviridis
ENSOCUG00000023761	-	75	100.000	ENSTBEG00000013776	SNRPD1	100	100.000	Tupaia_belangeri
ENSOCUG00000023761	-	98	100.000	ENSTTRG00000002654	SNRPD1	100	100.000	Tursiops_truncatus
ENSOCUG00000023761	-	97	100.000	ENSUAMG00000013431	SNRPD1	97	100.000	Ursus_americanus
ENSOCUG00000023761	-	100	98.291	ENSUMAG00000019740	SNRPD1	98	98.291	Ursus_maritimus
ENSOCUG00000023761	-	100	98.291	ENSVPAG00000010056	SNRPD1	79	98.291	Vicugna_pacos
ENSOCUG00000023761	-	96	100.000	ENSVVUG00000004009	SNRPD1	100	100.000	Vulpes_vulpes
ENSOCUG00000023761	-	100	96.581	ENSXETG00000027354	snrpd1	98	96.581	Xenopus_tropicalis
ENSOCUG00000023761	-	100	94.872	ENSXCOG00000020108	snrpd1	98	94.872	Xiphophorus_couchianus
ENSOCUG00000023761	-	100	94.872	ENSXMAG00000003368	snrpd1	98	94.872	Xiphophorus_maculatus