EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000023999 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 727 bases
Position: chr4:69142919-69143645
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000025805	RRM_1	PF00076.22	5.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000028227	-	681	-	ENSOCUP00000025805	227 (aa)	-	G1U8N8

Gene Model

Click here to download ENSOCUG00000023999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000023999's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000023999	-	70	52.381	ENSOCUG00000009785	-	54	62.346
ENSOCUG00000023999	-	69	41.573	ENSOCUG00000009274	SRSF5	63	41.379
ENSOCUG00000023999	-	65	32.500	ENSOCUG00000024603	SRSF9	70	32.317

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000023999	-	70	63.687	ENSG00000124193	SRSF6	74	58.268	Homo_sapiens
ENSOCUG00000023999	-	70	53.889	ENSAMEG00000003710	SRSF6	67	42.609	Ailuropoda_melanoleuca
ENSOCUG00000023999	-	89	48.444	ENSACIG00000020091	-	93	45.968	Amphilophus_citrinellus
ENSOCUG00000023999	-	74	46.809	ENSACIG00000023658	-	55	53.073	Amphilophus_citrinellus
ENSOCUG00000023999	-	70	55.367	ENSAOCG00000004309	-	55	53.714	Amphiprion_ocellaris
ENSOCUG00000023999	-	70	53.591	ENSAPEG00000013086	-	52	53.591	Amphiprion_percula
ENSOCUG00000023999	-	70	52.778	ENSAPEG00000020746	-	64	48.889	Amphiprion_percula
ENSOCUG00000023999	-	70	53.714	ENSATEG00000007255	-	70	49.724	Anabas_testudineus
ENSOCUG00000023999	-	56	53.020	ENSAPLG00000014472	SRSF6	62	52.850	Anas_platyrhynchos
ENSOCUG00000023999	-	70	54.190	ENSACAG00000002061	SRSF6	51	59.322	Anolis_carolinensis
ENSOCUG00000023999	-	70	63.687	ENSANAG00000024080	SRSF6	74	58.268	Aotus_nancymaae
ENSOCUG00000023999	-	70	47.541	ENSAMXG00000042692	-	94	46.212	Astyanax_mexicanus
ENSOCUG00000023999	-	70	62.570	ENSBTAG00000008527	SRSF6	74	57.480	Bos_taurus
ENSOCUG00000023999	-	70	63.687	ENSCJAG00000048403	SRSF6	93	58.498	Callithrix_jacchus
ENSOCUG00000023999	-	70	62.570	ENSCAFG00000009289	SRSF6	67	51.092	Canis_familiaris
ENSOCUG00000023999	-	70	62.570	ENSCAFG00020013559	SRSF6	67	51.092	Canis_lupus_dingo
ENSOCUG00000023999	-	70	62.570	ENSCHIG00000015890	-	74	57.480	Capra_hircus
ENSOCUG00000023999	-	70	62.011	ENSCHIG00000009148	-	74	57.087	Capra_hircus
ENSOCUG00000023999	-	63	61.111	ENSCPOG00000011761	SRSF6	51	61.111	Cavia_porcellus
ENSOCUG00000023999	-	71	62.286	ENSCCAG00000018540	-	59	62.286	Cebus_capucinus
ENSOCUG00000023999	-	70	63.687	ENSCCAG00000026018	-	74	58.268	Cebus_capucinus
ENSOCUG00000023999	-	70	63.687	ENSCATG00000030794	SRSF6	74	58.268	Cercocebus_atys
ENSOCUG00000023999	-	70	63.687	ENSCLAG00000010247	SRSF6	74	58.498	Chinchilla_lanigera
ENSOCUG00000023999	-	70	63.687	ENSCSAG00000014022	SRSF6	74	58.268	Chlorocebus_sabaeus
ENSOCUG00000023999	-	70	53.261	ENSCPBG00000018200	SRSF6	63	52.968	Chrysemys_picta_bellii
ENSOCUG00000023999	-	70	64.246	ENSCANG00000037774	-	74	58.661	Colobus_angolensis_palliatus
ENSOCUG00000023999	-	70	63.128	ENSCGRG00001022339	Srsf6	75	57.874	Cricetulus_griseus_chok1gshd
ENSOCUG00000023999	-	70	47.027	ENSDARG00000016783	srsf6b	51	54.167	Danio_rerio
ENSOCUG00000023999	-	70	63.687	ENSDNOG00000008410	SRSF6	73	58.268	Dasypus_novemcinctus
ENSOCUG00000023999	-	70	63.687	ENSDORG00000028378	Srsf6	74	58.268	Dipodomys_ordii
ENSOCUG00000023999	-	70	60.674	ENSETEG00000006221	SRSF6	66	52.423	Echinops_telfairi
ENSOCUG00000023999	-	70	62.570	ENSEASG00005023429	SRSF6	67	51.092	Equus_asinus_asinus
ENSOCUG00000023999	-	70	62.570	ENSECAG00000023932	SRSF6	71	51.092	Equus_caballus
ENSOCUG00000023999	-	70	52.273	ENSELUG00000013506	SRSF6	61	52.222	Esox_lucius
ENSOCUG00000023999	-	70	52.747	ENSELUG00000024182	SRSF6	98	41.791	Esox_lucius
ENSOCUG00000023999	-	70	62.570	ENSFCAG00000032814	SRSF6	67	51.092	Felis_catus
ENSOCUG00000023999	-	70	54.494	ENSFHEG00000023065	srsf6a	53	52.778	Fundulus_heteroclitus
ENSOCUG00000023999	-	69	47.904	ENSGMOG00000006105	srsf6a	61	44.848	Gadus_morhua
ENSOCUG00000023999	-	85	42.174	ENSGMOG00000014458	srsf6a	51	47.340	Gadus_morhua
ENSOCUG00000023999	-	70	54.645	ENSGALG00000000990	SRSF6	63	50.901	Gallus_gallus
ENSOCUG00000023999	-	70	52.542	ENSGACG00000006084	srsf6a	52	49.451	Gasterosteus_aculeatus
ENSOCUG00000023999	-	70	53.261	ENSGAGG00000003238	SRSF6	63	52.968	Gopherus_agassizii
ENSOCUG00000023999	-	70	63.687	ENSGGOG00000009808	SRSF6	74	58.268	Gorilla_gorilla
ENSOCUG00000023999	-	82	48.416	ENSHBUG00000006386	-	56	54.286	Haplochromis_burtoni
ENSOCUG00000023999	-	70	63.687	ENSHGLG00000007348	SRSF6	74	58.498	Heterocephalus_glaber_female
ENSOCUG00000023999	-	75	54.450	ENSHGLG00000007701	-	76	49.793	Heterocephalus_glaber_female
ENSOCUG00000023999	-	70	50.568	ENSHCOG00000002740	srsf6a	77	48.133	Hippocampus_comes
ENSOCUG00000023999	-	79	50.000	ENSIPUG00000004776	-	71	49.500	Ictalurus_punctatus
ENSOCUG00000023999	-	69	52.047	ENSIPUG00000016856	SRSF6	50	52.353	Ictalurus_punctatus
ENSOCUG00000023999	-	70	63.687	ENSSTOG00000010866	SRSF6	74	58.268	Ictidomys_tridecemlineatus
ENSOCUG00000023999	-	70	55.422	ENSKMAG00000011934	srsf6a	58	54.491	Kryptolebias_marmoratus
ENSOCUG00000023999	-	70	48.913	ENSLBEG00000007356	srsf6a	51	52.198	Labrus_bergylta
ENSOCUG00000023999	-	97	52.536	ENSLACG00000005466	SRSF6	53	58.101	Latimeria_chalumnae
ENSOCUG00000023999	-	70	63.687	ENSMFAG00000036925	SRSF6	74	58.268	Macaca_fascicularis
ENSOCUG00000023999	-	70	63.687	ENSMMUG00000006742	SRSF6	74	58.268	Macaca_mulatta
ENSOCUG00000023999	-	70	63.128	ENSMNEG00000038270	-	74	57.708	Macaca_nemestrina
ENSOCUG00000023999	-	70	63.128	ENSMNEG00000027392	-	74	57.874	Macaca_nemestrina
ENSOCUG00000023999	-	70	52.486	ENSMAMG00000017161	srsf6a	52	52.198	Mastacembelus_armatus
ENSOCUG00000023999	-	81	47.321	ENSMZEG00005008032	-	55	54.286	Maylandia_zebra
ENSOCUG00000023999	-	70	52.632	ENSMZEG00005020658	-	59	51.462	Maylandia_zebra
ENSOCUG00000023999	-	70	63.128	ENSMICG00000008537	SRSF6	74	57.874	Microcebus_murinus
ENSOCUG00000023999	-	70	54.396	ENSMODG00000003107	SRSF6	63	54.630	Monodelphis_domestica
ENSOCUG00000023999	-	70	63.128	MGP_CAROLIEiJ_G0024606	Srsf6	75	57.874	Mus_caroli
ENSOCUG00000023999	-	70	63.128	ENSMUSG00000016921	Srsf6	75	57.874	Mus_musculus
ENSOCUG00000023999	-	70	63.128	MGP_PahariEiJ_G0026050	Srsf6	75	57.874	Mus_pahari
ENSOCUG00000023999	-	70	63.128	MGP_SPRETEiJ_G0025528	Srsf6	75	57.874	Mus_spretus
ENSOCUG00000023999	-	70	62.570	ENSMPUG00000017692	SRSF6	80	51.092	Mustela_putorius_furo
ENSOCUG00000023999	-	70	50.556	ENSMLUG00000016618	SRSF6	74	48.855	Myotis_lucifugus
ENSOCUG00000023999	-	70	63.687	ENSNGAG00000017560	Srsf6	76	58.498	Nannospalax_galili
ENSOCUG00000023999	-	70	54.286	ENSNBRG00000014709	-	56	54.286	Neolamprologus_brichardi
ENSOCUG00000023999	-	70	53.333	ENSNBRG00000001846	-	51	52.747	Neolamprologus_brichardi
ENSOCUG00000023999	-	70	63.687	ENSNLEG00000006524	SRSF6	74	58.268	Nomascus_leucogenys
ENSOCUG00000023999	-	70	54.396	ENSMEUG00000014615	SRSF6	84	55.906	Notamacropus_eugenii
ENSOCUG00000023999	-	70	53.333	ENSONIG00000001925	-	51	52.747	Oreochromis_niloticus
ENSOCUG00000023999	-	70	52.514	ENSONIG00000020247	-	52	54.237	Oreochromis_niloticus
ENSOCUG00000023999	-	70	63.128	ENSOGAG00000014468	SRSF6	66	56.140	Otolemur_garnettii
ENSOCUG00000023999	-	70	57.222	ENSOARG00000003117	SRSF6	73	54.762	Ovis_aries
ENSOCUG00000023999	-	70	63.483	ENSPPAG00000034327	-	74	58.103	Pan_paniscus
ENSOCUG00000023999	-	70	62.570	ENSPPRG00000008917	SRSF6	67	51.092	Panthera_pardus
ENSOCUG00000023999	-	70	63.687	ENSPTRG00000044686	-	74	58.268	Pan_troglodytes
ENSOCUG00000023999	-	70	63.687	ENSPANG00000035224	SRSF6	74	58.268	Papio_anubis
ENSOCUG00000023999	-	70	48.315	ENSPKIG00000015703	-	82	39.669	Paramormyrops_kingsleyae
ENSOCUG00000023999	-	97	51.793	ENSPKIG00000018463	-	92	40.000	Paramormyrops_kingsleyae
ENSOCUG00000023999	-	70	54.749	ENSPMGG00000014963	srsf6a	54	54.749	Periophthalmus_magnuspinnatus
ENSOCUG00000023999	-	70	54.396	ENSPCIG00000003820	SRSF6	63	54.630	Phascolarctos_cinereus
ENSOCUG00000023999	-	70	57.233	ENSPLAG00000009243	srsf6a	82	43.511	Poecilia_latipinna
ENSOCUG00000023999	-	70	50.549	ENSPMEG00000006042	SRSF6	53	54.144	Poecilia_mexicana
ENSOCUG00000023999	-	70	63.687	ENSPPYG00000011019	SRSF6	74	58.268	Pongo_abelii
ENSOCUG00000023999	-	70	62.011	ENSPCAG00000010954	SRSF6	69	55.702	Procavia_capensis
ENSOCUG00000023999	-	70	63.128	ENSPCOG00000026364	SRSF6	66	51.528	Propithecus_coquereli
ENSOCUG00000023999	-	70	61.111	ENSPVAG00000015232	SRSF6	74	57.087	Pteropus_vampyrus
ENSOCUG00000023999	-	70	54.286	ENSPNYG00000004944	-	56	54.286	Pundamilia_nyererei
ENSOCUG00000023999	-	70	53.333	ENSPNYG00000011272	-	50	52.747	Pundamilia_nyererei
ENSOCUG00000023999	-	70	63.128	ENSRNOG00000006380	Srsf6	75	57.874	Rattus_norvegicus
ENSOCUG00000023999	-	70	57.386	ENSRBIG00000041414	SRSF6	70	54.772	Rhinopithecus_bieti
ENSOCUG00000023999	-	70	63.687	ENSRROG00000029989	SRSF6	70	57.676	Rhinopithecus_roxellana
ENSOCUG00000023999	-	70	63.687	ENSSBOG00000033708	-	74	58.268	Saimiri_boliviensis_boliviensis
ENSOCUG00000023999	-	70	52.247	ENSSBOG00000034078	-	53	52.000	Saimiri_boliviensis_boliviensis
ENSOCUG00000023999	-	70	54.396	ENSSHAG00000012805	SRSF6	75	56.250	Sarcophilus_harrisii
ENSOCUG00000023999	-	70	53.672	ENSSFOG00015015169	SRSF6	58	53.333	Scleropages_formosus
ENSOCUG00000023999	-	70	47.486	ENSSMAG00000017447	-	54	49.153	Scophthalmus_maximus
ENSOCUG00000023999	-	70	52.486	ENSSDUG00000016097	srsf6a	52	52.486	Seriola_dumerili
ENSOCUG00000023999	-	70	57.233	ENSSLDG00000022841	srsf6a	52	52.486	Seriola_lalandi_dorsalis
ENSOCUG00000023999	-	70	54.749	ENSSPUG00000004967	SRSF6	74	54.762	Sphenodon_punctatus
ENSOCUG00000023999	-	96	46.484	ENSSPAG00000002362	srsf6a	50	52.486	Stegastes_partitus
ENSOCUG00000023999	-	70	62.570	ENSSSCG00000007362	SRSF6	84	57.480	Sus_scrofa
ENSOCUG00000023999	-	70	53.297	ENSTGUG00000003455	SRSF6	63	52.511	Taeniopygia_guttata
ENSOCUG00000023999	-	70	53.039	ENSTNIG00000001692	srsf6a	55	52.747	Tetraodon_nigroviridis
ENSOCUG00000023999	-	57	62.838	ENSTBEG00000013448	SRSF6	71	56.757	Tupaia_belangeri
ENSOCUG00000023999	-	70	62.570	ENSUAMG00000003559	SRSF6	67	51.092	Ursus_americanus
ENSOCUG00000023999	-	70	54.237	ENSXMAG00000021849	srsf6a	75	46.774	Xiphophorus_maculatus