EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000024126 (Gene tree)
Gene ID: 100349333
Gene Symbol: DDX39B
Alias: -
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 9966 bases
Position: chr12:20352383-20362348
Accession: 100349333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000025395	DEAD	PF00270.29	3.7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000026577	DDX39B-201	1544	XM_008262545	ENSOCUP00000025395	442 (aa)	XP_008260767	G1U7I9

Gene Model

Click here to download ENSOCUG00000024126's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03013	RNA transport	KEGG
ocu03015	mRNA surveillance pathway	KEGG
ocu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000024126's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000024126	DDX39B	91	31.159	ENSOCUG00000004095	-	75	31.159
ENSOCUG00000024126	DDX39B	68	31.169	ENSOCUG00000029227	-	96	31.169
ENSOCUG00000024126	DDX39B	87	37.143	ENSOCUG00000005011	EIF4A2	90	37.143
ENSOCUG00000024126	DDX39B	92	35.697	ENSOCUG00000010375	EIF4A1	95	35.697
ENSOCUG00000024126	DDX39B	99	32.883	ENSOCUG00000005849	DDX6	88	32.883
ENSOCUG00000024126	DDX39B	84	62.766	ENSOCUG00000002496	DDX39A	100	62.766
ENSOCUG00000024126	DDX39B	86	30.457	ENSOCUG00000004476	DDX25	82	30.641
ENSOCUG00000024126	DDX39B	81	33.702	ENSOCUG00000014390	DDX47	75	33.702

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000024126	DDX39B	100	96.163	ENSG00000198563	DDX39B	100	96.163	Homo_sapiens
ENSOCUG00000024126	DDX39B	99	98.182	ENSAMEG00000009508	DDX39B	100	98.182	Ailuropoda_melanoleuca
ENSOCUG00000024126	DDX39B	99	90.045	ENSACIG00000004534	ddx39b	98	90.045	Amphilophus_citrinellus
ENSOCUG00000024126	DDX39B	100	89.709	ENSATEG00000012366	ddx39b	100	89.709	Anabas_testudineus
ENSOCUG00000024126	DDX39B	100	93.468	ENSACAG00000012240	DDX39B	100	93.468	Anolis_carolinensis
ENSOCUG00000024126	DDX39B	100	96.163	ENSANAG00000030372	DDX39B	100	96.163	Aotus_nancymaae
ENSOCUG00000024126	DDX39B	99	87.305	ENSACLG00000018759	ddx39b	99	87.305	Astatotilapia_calliptera
ENSOCUG00000024126	DDX39B	100	89.357	ENSAMXG00000017837	ddx39b	100	89.357	Astyanax_mexicanus
ENSOCUG00000024126	DDX39B	100	95.937	ENSBTAG00000014490	DDX39B	100	95.937	Bos_taurus
ENSOCUG00000024126	DDX39B	100	96.163	ENSCJAG00000003152	DDX39B	100	96.163	Callithrix_jacchus
ENSOCUG00000024126	DDX39B	100	96.163	ENSCAFG00000000509	DDX39B	100	99.677	Canis_familiaris
ENSOCUG00000024126	DDX39B	100	96.163	ENSCAFG00020020530	DDX39B	100	96.163	Canis_lupus_dingo
ENSOCUG00000024126	DDX39B	100	95.937	ENSCHIG00000004579	DDX39B	100	95.937	Capra_hircus
ENSOCUG00000024126	DDX39B	100	81.941	ENSTSYG00000029741	-	94	80.102	Carlito_syrichta
ENSOCUG00000024126	DDX39B	100	96.163	ENSTSYG00000010226	-	100	96.163	Carlito_syrichta
ENSOCUG00000024126	DDX39B	100	95.937	ENSCAPG00000010066	DDX39B	100	95.937	Cavia_aperea
ENSOCUG00000024126	DDX39B	100	95.937	ENSCPOG00000002335	DDX39B	100	95.937	Cavia_porcellus
ENSOCUG00000024126	DDX39B	100	96.163	ENSCCAG00000027897	DDX39B	100	96.163	Cebus_capucinus
ENSOCUG00000024126	DDX39B	99	87.699	ENSCATG00000043709	DDX39B	99	87.699	Cercocebus_atys
ENSOCUG00000024126	DDX39B	100	95.937	ENSCLAG00000014555	DDX39B	100	95.937	Chinchilla_lanigera
ENSOCUG00000024126	DDX39B	99	95.909	ENSCSAG00000008517	DDX39B	100	95.909	Chlorocebus_sabaeus
ENSOCUG00000024126	DDX39B	62	100.000	ENSCPBG00000014671	-	100	100.000	Chrysemys_picta_bellii
ENSOCUG00000024126	DDX39B	100	96.163	ENSCANG00000041217	DDX39B	100	96.163	Colobus_angolensis_palliatus
ENSOCUG00000024126	DDX39B	84	80.914	ENSCGRG00001021916	-	89	80.914	Cricetulus_griseus_chok1gshd
ENSOCUG00000024126	DDX39B	59	92.692	ENSCGRG00001017315	-	95	91.403	Cricetulus_griseus_chok1gshd
ENSOCUG00000024126	DDX39B	50	90.909	ENSCGRG00000000078	-	90	90.909	Cricetulus_griseus_crigri
ENSOCUG00000024126	DDX39B	59	92.692	ENSCGRG00000012479	-	76	92.692	Cricetulus_griseus_crigri
ENSOCUG00000024126	DDX39B	100	89.111	ENSDARG00000036069	ddx39b	100	89.333	Danio_rerio
ENSOCUG00000024126	DDX39B	100	96.163	ENSDNOG00000010215	DDX39B	100	96.163	Dasypus_novemcinctus
ENSOCUG00000024126	DDX39B	88	95.887	ENSDORG00000004985	Ddx39b	100	95.887	Dipodomys_ordii
ENSOCUG00000024126	DDX39B	88	83.033	ENSETEG00000009649	DDX39B	87	83.033	Echinops_telfairi
ENSOCUG00000024126	DDX39B	100	96.163	ENSEASG00005017156	DDX39B	100	96.163	Equus_asinus_asinus
ENSOCUG00000024126	DDX39B	100	96.163	ENSECAG00000007750	DDX39B	100	96.163	Equus_caballus
ENSOCUG00000024126	DDX39B	100	89.238	ENSELUG00000017904	ddx39b	100	89.238	Esox_lucius
ENSOCUG00000024126	DDX39B	100	96.388	ENSFCAG00000004497	DDX39B	100	96.388	Felis_catus
ENSOCUG00000024126	DDX39B	100	95.937	ENSFDAG00000011074	DDX39B	100	95.937	Fukomys_damarensis
ENSOCUG00000024126	DDX39B	71	99.365	ENSGAGG00000001300	-	80	99.365	Gopherus_agassizii
ENSOCUG00000024126	DDX39B	100	96.163	ENSGGOG00000005989	DDX39B	100	96.163	Gorilla_gorilla
ENSOCUG00000024126	DDX39B	50	81.250	ENSHBUG00000022054	-	77	81.250	Haplochromis_burtoni
ENSOCUG00000024126	DDX39B	100	95.485	ENSHGLG00000019248	DDX39B	100	95.485	Heterocephalus_glaber_female
ENSOCUG00000024126	DDX39B	100	95.485	ENSHGLG00100011850	DDX39B	100	95.485	Heterocephalus_glaber_male
ENSOCUG00000024126	DDX39B	100	88.248	ENSIPUG00000015733	DDX39B	94	88.692	Ictalurus_punctatus
ENSOCUG00000024126	DDX39B	100	95.711	ENSSTOG00000012838	DDX39B	100	95.711	Ictidomys_tridecemlineatus
ENSOCUG00000024126	DDX39B	100	95.485	ENSJJAG00000005660	-	100	95.485	Jaculus_jaculus
ENSOCUG00000024126	DDX39B	99	75.571	ENSLBEG00000012254	ddx39b	99	75.571	Labrus_bergylta
ENSOCUG00000024126	DDX39B	67	74.747	ENSLBEG00000017177	-	81	74.747	Labrus_bergylta
ENSOCUG00000024126	DDX39B	100	86.742	ENSLACG00000002110	DDX39B	100	86.742	Latimeria_chalumnae
ENSOCUG00000024126	DDX39B	100	95.937	ENSLAFG00000014202	DDX39B	100	95.937	Loxodonta_africana
ENSOCUG00000024126	DDX39B	100	96.163	ENSMFAG00000034233	DDX39B	100	96.163	Macaca_fascicularis
ENSOCUG00000024126	DDX39B	100	96.163	ENSMMUG00000008839	DDX39B	100	96.163	Macaca_mulatta
ENSOCUG00000024126	DDX39B	100	96.163	ENSMNEG00000041059	DDX39B	100	96.163	Macaca_nemestrina
ENSOCUG00000024126	DDX39B	100	96.163	ENSMLEG00000043791	DDX39B	100	96.163	Mandrillus_leucophaeus
ENSOCUG00000024126	DDX39B	99	87.305	ENSMZEG00005017654	ddx39b	99	87.305	Maylandia_zebra
ENSOCUG00000024126	DDX39B	100	95.485	ENSMAUG00000008059	Ddx39b	100	95.485	Mesocricetus_auratus
ENSOCUG00000024126	DDX39B	100	96.163	ENSMICG00000017349	DDX39B	100	96.163	Microcebus_murinus
ENSOCUG00000024126	DDX39B	100	95.711	ENSMOCG00000011169	Ddx39b	100	95.711	Microtus_ochrogaster
ENSOCUG00000024126	DDX39B	88	95.396	ENSMODG00000015791	DDX39B	88	95.396	Monodelphis_domestica
ENSOCUG00000024126	DDX39B	100	95.711	ENSMUSG00000019432	Ddx39b	100	95.711	Mus_musculus
ENSOCUG00000024126	DDX39B	100	95.711	MGP_PahariEiJ_G0020513	Ddx39b	100	95.711	Mus_pahari
ENSOCUG00000024126	DDX39B	100	95.711	MGP_SPRETEiJ_G0022424	Ddx39b	100	95.711	Mus_spretus
ENSOCUG00000024126	DDX39B	100	96.388	ENSMPUG00000011407	DDX39B	100	96.388	Mustela_putorius_furo
ENSOCUG00000024126	DDX39B	70	99.678	ENSMLUG00000001681	DDX39B	100	99.678	Myotis_lucifugus
ENSOCUG00000024126	DDX39B	100	96.163	ENSNGAG00000022948	Ddx39b	100	96.163	Nannospalax_galili
ENSOCUG00000024126	DDX39B	81	99.649	ENSNLEG00000006094	DDX39B	100	99.649	Nomascus_leucogenys
ENSOCUG00000024126	DDX39B	86	100.000	ENSMEUG00000008264	DDX39B	86	100.000	Notamacropus_eugenii
ENSOCUG00000024126	DDX39B	100	96.388	ENSOPRG00000011923	DDX39B	100	96.388	Ochotona_princeps
ENSOCUG00000024126	DDX39B	100	95.711	ENSODEG00000018083	DDX39B	100	95.711	Octodon_degus
ENSOCUG00000024126	DDX39B	100	88.367	ENSONIG00000004740	ddx39b	100	88.367	Oreochromis_niloticus
ENSOCUG00000024126	DDX39B	57	92.460	ENSOANG00000008361	DDX39B	95	92.460	Ornithorhynchus_anatinus
ENSOCUG00000024126	DDX39B	100	95.270	ENSOGAG00000028850	-	100	95.270	Otolemur_garnettii
ENSOCUG00000024126	DDX39B	84	93.316	ENSOGAG00000009067	-	100	93.805	Otolemur_garnettii
ENSOCUG00000024126	DDX39B	100	95.937	ENSOARG00000008787	DDX39B	98	95.937	Ovis_aries
ENSOCUG00000024126	DDX39B	100	96.163	ENSPPAG00000043072	DDX39B	100	96.163	Pan_paniscus
ENSOCUG00000024126	DDX39B	100	96.388	ENSPPRG00000001913	DDX39B	100	96.388	Panthera_pardus
ENSOCUG00000024126	DDX39B	100	95.485	ENSPTIG00000017669	DDX39B	100	95.485	Panthera_tigris_altaica
ENSOCUG00000024126	DDX39B	100	96.163	ENSPTRG00000032509	DDX39B	100	96.163	Pan_troglodytes
ENSOCUG00000024126	DDX39B	100	96.163	ENSPANG00000018609	DDX39B	100	96.163	Papio_anubis
ENSOCUG00000024126	DDX39B	100	87.832	ENSPKIG00000011324	ddx39b	100	88.496	Paramormyrops_kingsleyae
ENSOCUG00000024126	DDX39B	100	95.485	ENSPEMG00000016905	Ddx39b	100	95.485	Peromyscus_maniculatus_bairdii
ENSOCUG00000024126	DDX39B	100	96.163	ENSPCIG00000017572	DDX39B	100	96.163	Phascolarctos_cinereus
ENSOCUG00000024126	DDX39B	100	96.163	ENSPPYG00000016433	DDX39B	100	96.163	Pongo_abelii
ENSOCUG00000024126	DDX39B	64	99.648	ENSPCAG00000003484	DDX39B	100	99.648	Procavia_capensis
ENSOCUG00000024126	DDX39B	100	96.163	ENSPCOG00000018656	DDX39B	100	96.163	Propithecus_coquereli
ENSOCUG00000024126	DDX39B	100	95.711	ENSPVAG00000004653	DDX39B	100	95.711	Pteropus_vampyrus
ENSOCUG00000024126	DDX39B	99	79.638	ENSPNYG00000010382	ddx39b	98	79.638	Pundamilia_nyererei
ENSOCUG00000024126	DDX39B	100	89.135	ENSPNAG00000026926	ddx39b	100	89.135	Pygocentrus_nattereri
ENSOCUG00000024126	DDX39B	100	95.711	ENSRNOG00000000841	Ddx39b	100	95.711	Rattus_norvegicus
ENSOCUG00000024126	DDX39B	100	86.230	ENSRBIG00000031309	DDX39B	100	86.230	Rhinopithecus_bieti
ENSOCUG00000024126	DDX39B	100	96.163	ENSRROG00000039517	DDX39B	100	96.163	Rhinopithecus_roxellana
ENSOCUG00000024126	DDX39B	100	86.230	ENSSBOG00000035513	-	100	86.230	Saimiri_boliviensis_boliviensis
ENSOCUG00000024126	DDX39B	100	96.163	ENSSHAG00000003209	DDX39B	100	96.163	Sarcophilus_harrisii
ENSOCUG00000024126	DDX39B	100	87.611	ENSSFOG00015016107	ddx39b	100	88.274	Scleropages_formosus
ENSOCUG00000024126	DDX39B	100	90.157	ENSSDUG00000011557	ddx39b	100	90.380	Seriola_dumerili
ENSOCUG00000024126	DDX39B	100	89.933	ENSSLDG00000015763	ddx39b	100	90.157	Seriola_lalandi_dorsalis
ENSOCUG00000024126	DDX39B	88	84.319	ENSSARG00000005245	DDX39B	100	84.319	Sorex_araneus
ENSOCUG00000024126	DDX39B	100	94.131	ENSSPUG00000012805	DDX39B	100	94.131	Sphenodon_punctatus
ENSOCUG00000024126	DDX39B	100	96.163	ENSSSCG00000001400	DDX39B	100	95.568	Sus_scrofa
ENSOCUG00000024126	DDX39B	100	74.208	ENSTBEG00000003721	DDX39B	100	74.208	Tupaia_belangeri
ENSOCUG00000024126	DDX39B	100	87.946	ENSTTRG00000014074	DDX39B	100	87.946	Tursiops_truncatus
ENSOCUG00000024126	DDX39B	100	84.045	ENSUAMG00000027335	DDX39B	100	84.045	Ursus_americanus
ENSOCUG00000024126	DDX39B	100	87.810	ENSUMAG00000015124	DDX39B	100	87.810	Ursus_maritimus
ENSOCUG00000024126	DDX39B	60	99.115	ENSVPAG00000009167	-	74	99.115	Vicugna_pacos
ENSOCUG00000024126	DDX39B	100	96.163	ENSVVUG00000019518	DDX39B	99	96.163	Vulpes_vulpes
ENSOCUG00000024126	DDX39B	100	80.674	ENSXETG00000002498	ddx39b	99	80.674	Xenopus_tropicalis