EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000024139 (Gene tree)
Gene ID: 100351329
Gene Symbol: TRA2A
Alias: -
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 19175 bases
Position: chr10:8558977-8578151
Accession: 100351329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000022441	RRM_1	PF00076.22	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000022727	TRA2A-201	1894	XM_008261529	ENSOCUP00000022441	282 (aa)	XP_008259751	G1TZB9

Gene Model

Click here to download ENSOCUG00000024139's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000024139's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000024139	TRA2A	60	65.957	ENSOCUG00000008940	TRA2B	80	63.563

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000024139	TRA2A	100	99.645	ENSG00000164548	TRA2A	100	100.000	Homo_sapiens
ENSOCUG00000024139	TRA2A	90	75.277	ENSAPOG00000017425	tra2a	90	75.277	Acanthochromis_polyacanthus
ENSOCUG00000024139	TRA2A	95	97.417	ENSAMEG00000003501	TRA2A	84	97.417	Ailuropoda_melanoleuca
ENSOCUG00000024139	TRA2A	54	87.500	ENSACIG00000001333	tra2a	79	87.500	Amphilophus_citrinellus
ENSOCUG00000024139	TRA2A	90	76.015	ENSAOCG00000015445	tra2a	90	76.015	Amphiprion_ocellaris
ENSOCUG00000024139	TRA2A	90	76.015	ENSAPEG00000018557	tra2a	90	76.015	Amphiprion_percula
ENSOCUG00000024139	TRA2A	90	77.491	ENSATEG00000000671	tra2a	90	77.491	Anabas_testudineus
ENSOCUG00000024139	TRA2A	85	91.770	ENSAPLG00000013689	TRA2A	90	92.181	Anas_platyrhynchos
ENSOCUG00000024139	TRA2A	90	94.118	ENSACAG00000013502	TRA2A	90	93.333	Anolis_carolinensis
ENSOCUG00000024139	TRA2A	90	78.598	ENSACLG00000024845	tra2a	90	78.598	Astatotilapia_calliptera
ENSOCUG00000024139	TRA2A	60	89.595	ENSAMXG00000005553	tra2a	98	83.673	Astyanax_mexicanus
ENSOCUG00000024139	TRA2A	100	99.291	ENSBTAG00000012622	TRA2A	100	99.291	Bos_taurus
ENSOCUG00000024139	TRA2A	100	99.645	ENSCJAG00000001509	-	100	99.645	Callithrix_jacchus
ENSOCUG00000024139	TRA2A	94	97.727	ENSCJAG00000045802	-	100	97.727	Callithrix_jacchus
ENSOCUG00000024139	TRA2A	99	99.283	ENSCAFG00000002788	TRA2A	100	99.283	Canis_familiaris
ENSOCUG00000024139	TRA2A	90	98.425	ENSCAFG00020002745	TRA2A	95	98.425	Canis_lupus_dingo
ENSOCUG00000024139	TRA2A	100	99.645	ENSTSYG00000000388	TRA2A	100	100.000	Carlito_syrichta
ENSOCUG00000024139	TRA2A	86	85.950	ENSCAPG00000017377	TRA2A	87	86.307	Cavia_aperea
ENSOCUG00000024139	TRA2A	100	99.645	ENSCPOG00000010739	TRA2A	100	99.645	Cavia_porcellus
ENSOCUG00000024139	TRA2A	100	99.645	ENSCCAG00000019576	TRA2A	100	100.000	Cebus_capucinus
ENSOCUG00000024139	TRA2A	100	99.645	ENSCATG00000041219	TRA2A	100	100.000	Cercocebus_atys
ENSOCUG00000024139	TRA2A	100	99.645	ENSCLAG00000007917	TRA2A	100	99.645	Chinchilla_lanigera
ENSOCUG00000024139	TRA2A	99	99.642	ENSCSAG00000014051	TRA2A	99	99.642	Chlorocebus_sabaeus
ENSOCUG00000024139	TRA2A	100	99.291	ENSCHOG00000001130	TRA2A	100	99.291	Choloepus_hoffmanni
ENSOCUG00000024139	TRA2A	100	96.127	ENSCPBG00000022466	TRA2A	100	96.127	Chrysemys_picta_bellii
ENSOCUG00000024139	TRA2A	100	99.645	ENSCANG00000031292	TRA2A	100	100.000	Colobus_angolensis_palliatus
ENSOCUG00000024139	TRA2A	100	98.239	ENSCGRG00001019980	Tra2a	100	98.239	Cricetulus_griseus_chok1gshd
ENSOCUG00000024139	TRA2A	96	98.162	ENSCGRG00000006087	Tra2a	100	98.162	Cricetulus_griseus_crigri
ENSOCUG00000024139	TRA2A	90	71.062	ENSCSEG00000012193	tra2a	98	78.571	Cynoglossus_semilaevis
ENSOCUG00000024139	TRA2A	57	81.988	ENSDARG00000007863	tra2a	90	76.103	Danio_rerio
ENSOCUG00000024139	TRA2A	100	99.291	ENSDNOG00000039446	TRA2A	100	99.291	Dasypus_novemcinctus
ENSOCUG00000024139	TRA2A	100	98.936	ENSDORG00000009361	Tra2a	100	98.936	Dipodomys_ordii
ENSOCUG00000024139	TRA2A	100	82.230	ENSETEG00000007250	TRA2A	100	82.230	Echinops_telfairi
ENSOCUG00000024139	TRA2A	100	99.291	ENSEASG00005022002	TRA2A	100	99.291	Equus_asinus_asinus
ENSOCUG00000024139	TRA2A	100	99.291	ENSECAG00000011508	TRA2A	100	99.291	Equus_caballus
ENSOCUG00000024139	TRA2A	100	98.582	ENSEEUG00000015674	TRA2A	100	98.582	Erinaceus_europaeus
ENSOCUG00000024139	TRA2A	76	74.153	ENSELUG00000005846	tra2a	91	69.024	Esox_lucius
ENSOCUG00000024139	TRA2A	100	99.291	ENSFCAG00000005361	TRA2A	100	99.291	Felis_catus
ENSOCUG00000024139	TRA2A	96	94.444	ENSFALG00000009605	TRA2A	100	94.444	Ficedula_albicollis
ENSOCUG00000024139	TRA2A	100	98.940	ENSFDAG00000004949	TRA2A	100	98.940	Fukomys_damarensis
ENSOCUG00000024139	TRA2A	90	69.314	ENSGMOG00000013740	tra2a	91	69.314	Gadus_morhua
ENSOCUG00000024139	TRA2A	100	94.014	ENSGALG00000010973	TRA2A	100	94.014	Gallus_gallus
ENSOCUG00000024139	TRA2A	90	74.806	ENSGACG00000006878	tra2a	89	77.519	Gasterosteus_aculeatus
ENSOCUG00000024139	TRA2A	100	95.423	ENSGAGG00000005793	TRA2A	100	95.423	Gopherus_agassizii
ENSOCUG00000024139	TRA2A	100	99.645	ENSGGOG00000009053	TRA2A	100	99.645	Gorilla_gorilla
ENSOCUG00000024139	TRA2A	90	79.336	ENSHBUG00000018234	tra2a	90	79.336	Haplochromis_burtoni
ENSOCUG00000024139	TRA2A	100	99.645	ENSHGLG00000012168	TRA2A	100	99.645	Heterocephalus_glaber_female
ENSOCUG00000024139	TRA2A	100	99.645	ENSHGLG00100014577	TRA2A	100	99.645	Heterocephalus_glaber_male
ENSOCUG00000024139	TRA2A	64	64.921	ENSHCOG00000006314	tra2a	66	67.347	Hippocampus_comes
ENSOCUG00000024139	TRA2A	62	61.458	ENSHCOG00000006320	tra2a	96	61.458	Hippocampus_comes
ENSOCUG00000024139	TRA2A	100	99.645	ENSSTOG00000012073	TRA2A	100	99.645	Ictidomys_tridecemlineatus
ENSOCUG00000024139	TRA2A	100	98.936	ENSJJAG00000022787	Tra2a	100	98.936	Jaculus_jaculus
ENSOCUG00000024139	TRA2A	85	75.479	ENSLBEG00000005297	tra2a	88	75.479	Labrus_bergylta
ENSOCUG00000024139	TRA2A	90	87.795	ENSLACG00000014765	TRA2A	90	87.795	Latimeria_chalumnae
ENSOCUG00000024139	TRA2A	90	77.860	ENSLOCG00000011615	-	90	77.860	Lepisosteus_oculatus
ENSOCUG00000024139	TRA2A	76	62.780	ENSLOCG00000009558	-	58	79.769	Lepisosteus_oculatus
ENSOCUG00000024139	TRA2A	100	99.293	ENSLAFG00000006598	TRA2A	100	99.293	Loxodonta_africana
ENSOCUG00000024139	TRA2A	100	99.645	ENSMFAG00000043211	TRA2A	100	100.000	Macaca_fascicularis
ENSOCUG00000024139	TRA2A	100	99.645	ENSMMUG00000006286	TRA2A	100	99.645	Macaca_mulatta
ENSOCUG00000024139	TRA2A	100	99.645	ENSMNEG00000040670	TRA2A	100	100.000	Macaca_nemestrina
ENSOCUG00000024139	TRA2A	100	99.645	ENSMLEG00000032154	TRA2A	100	100.000	Mandrillus_leucophaeus
ENSOCUG00000024139	TRA2A	76	81.116	ENSMAMG00000008575	tra2a	90	81.466	Mastacembelus_armatus
ENSOCUG00000024139	TRA2A	90	78.598	ENSMZEG00005009142	tra2a	90	78.598	Maylandia_zebra
ENSOCUG00000024139	TRA2A	90	89.412	ENSMGAG00000010514	TRA2A	89	92.593	Meleagris_gallopavo
ENSOCUG00000024139	TRA2A	100	76.950	ENSMICG00000036849	-	88	76.285	Microcebus_murinus
ENSOCUG00000024139	TRA2A	100	99.291	ENSMICG00000043639	-	100	100.000	Microcebus_murinus
ENSOCUG00000024139	TRA2A	63	90.960	ENSMOCG00000010249	-	88	89.177	Microtus_ochrogaster
ENSOCUG00000024139	TRA2A	71	83.085	ENSMOCG00000006467	-	97	82.090	Microtus_ochrogaster
ENSOCUG00000024139	TRA2A	87	79.675	ENSMMOG00000020174	tra2a	83	79.583	Mola_mola
ENSOCUG00000024139	TRA2A	100	97.872	ENSMODG00000000807	TRA2A	100	97.872	Monodelphis_domestica
ENSOCUG00000024139	TRA2A	85	77.308	ENSMALG00000020875	tra2a	90	76.277	Monopterus_albus
ENSOCUG00000024139	TRA2A	100	98.239	ENSMUSG00000029817	Tra2a	100	98.239	Mus_musculus
ENSOCUG00000024139	TRA2A	100	97.887	MGP_PahariEiJ_G0022115	Tra2a	100	97.887	Mus_pahari
ENSOCUG00000024139	TRA2A	100	98.239	MGP_SPRETEiJ_G0029368	Tra2a	100	98.239	Mus_spretus
ENSOCUG00000024139	TRA2A	100	98.936	ENSMPUG00000013480	TRA2A	100	98.936	Mustela_putorius_furo
ENSOCUG00000024139	TRA2A	100	98.233	ENSMLUG00000013972	TRA2A	100	98.233	Myotis_lucifugus
ENSOCUG00000024139	TRA2A	100	98.227	ENSNGAG00000023805	Tra2a	100	98.227	Nannospalax_galili
ENSOCUG00000024139	TRA2A	54	89.542	ENSNBRG00000005992	tra2a	73	90.850	Neolamprologus_brichardi
ENSOCUG00000024139	TRA2A	100	99.645	ENSNLEG00000014794	TRA2A	100	100.000	Nomascus_leucogenys
ENSOCUG00000024139	TRA2A	64	71.823	ENSNLEG00000029659	-	88	76.316	Nomascus_leucogenys
ENSOCUG00000024139	TRA2A	100	97.527	ENSMEUG00000001202	TRA2A	100	97.527	Notamacropus_eugenii
ENSOCUG00000024139	TRA2A	100	98.936	ENSOPRG00000007606	TRA2A	100	98.936	Ochotona_princeps
ENSOCUG00000024139	TRA2A	100	99.645	ENSODEG00000008335	TRA2A	100	99.645	Octodon_degus
ENSOCUG00000024139	TRA2A	90	78.467	ENSONIG00000004503	tra2a	90	78.467	Oreochromis_niloticus
ENSOCUG00000024139	TRA2A	89	88.372	ENSOANG00000014202	TRA2A	90	87.597	Ornithorhynchus_anatinus
ENSOCUG00000024139	TRA2A	82	69.697	ENSORLG00000022191	tra2a	60	74.251	Oryzias_latipes
ENSOCUG00000024139	TRA2A	82	69.264	ENSORLG00020003490	tra2a	60	73.653	Oryzias_latipes_hni
ENSOCUG00000024139	TRA2A	82	68.831	ENSORLG00015015485	tra2a	60	73.054	Oryzias_latipes_hsok
ENSOCUG00000024139	TRA2A	82	67.965	ENSOMEG00000017864	tra2a	60	71.856	Oryzias_melastigma
ENSOCUG00000024139	TRA2A	99	96.786	ENSOGAG00000009733	TRA2A	99	96.786	Otolemur_garnettii
ENSOCUG00000024139	TRA2A	100	98.227	ENSOARG00000013147	TRA2A	100	98.227	Ovis_aries
ENSOCUG00000024139	TRA2A	90	87.500	ENSOARG00000002323	-	100	89.825	Ovis_aries
ENSOCUG00000024139	TRA2A	99	99.642	ENSPPAG00000034382	TRA2A	99	100.000	Pan_paniscus
ENSOCUG00000024139	TRA2A	100	99.291	ENSPPRG00000015216	TRA2A	100	99.291	Panthera_pardus
ENSOCUG00000024139	TRA2A	100	99.291	ENSPTIG00000021114	TRA2A	100	99.291	Panthera_tigris_altaica
ENSOCUG00000024139	TRA2A	100	99.645	ENSPTRG00000018988	TRA2A	100	100.000	Pan_troglodytes
ENSOCUG00000024139	TRA2A	100	99.645	ENSPTRG00000046098	-	100	99.645	Pan_troglodytes
ENSOCUG00000024139	TRA2A	100	99.645	ENSPANG00000014541	TRA2A	100	99.645	Papio_anubis
ENSOCUG00000024139	TRA2A	90	76.015	ENSPKIG00000012298	tra2a	90	75.277	Paramormyrops_kingsleyae
ENSOCUG00000024139	TRA2A	88	93.976	ENSPSIG00000014993	TRA2A	90	93.976	Pelodiscus_sinensis
ENSOCUG00000024139	TRA2A	100	98.587	ENSPEMG00000008564	-	100	98.587	Peromyscus_maniculatus_bairdii
ENSOCUG00000024139	TRA2A	63	69.663	ENSPMAG00000007947	tra2a	59	69.697	Petromyzon_marinus
ENSOCUG00000024139	TRA2A	100	97.872	ENSPCIG00000007917	TRA2A	100	97.872	Phascolarctos_cinereus
ENSOCUG00000024139	TRA2A	100	99.645	ENSPPYG00000017728	TRA2A	100	99.645	Pongo_abelii
ENSOCUG00000024139	TRA2A	99	98.571	ENSPCAG00000004148	TRA2A	100	98.571	Procavia_capensis
ENSOCUG00000024139	TRA2A	100	85.461	ENSPCOG00000020465	TRA2A	100	85.461	Propithecus_coquereli
ENSOCUG00000024139	TRA2A	100	98.940	ENSPVAG00000011298	TRA2A	100	98.940	Pteropus_vampyrus
ENSOCUG00000024139	TRA2A	54	87.821	ENSPNYG00000020134	tra2a	91	75.385	Pundamilia_nyererei
ENSOCUG00000024139	TRA2A	90	73.063	ENSPNAG00000000482	tra2a	90	70.849	Pygocentrus_nattereri
ENSOCUG00000024139	TRA2A	100	98.239	ENSRNOG00000009156	Tra2a	100	98.239	Rattus_norvegicus
ENSOCUG00000024139	TRA2A	100	99.291	ENSRROG00000030758	TRA2A	100	100.000	Rhinopithecus_roxellana
ENSOCUG00000024139	TRA2A	100	99.645	ENSSBOG00000031562	TRA2A	100	100.000	Saimiri_boliviensis_boliviensis
ENSOCUG00000024139	TRA2A	89	95.200	ENSSHAG00000005727	TRA2A	88	95.200	Sarcophilus_harrisii
ENSOCUG00000024139	TRA2A	90	79.842	ENSSFOG00015014004	tra2a	90	74.539	Scleropages_formosus
ENSOCUG00000024139	TRA2A	93	73.404	ENSSMAG00000014242	tra2a	90	73.063	Scophthalmus_maximus
ENSOCUG00000024139	TRA2A	90	83.203	ENSSDUG00000005610	tra2a	89	83.203	Seriola_dumerili
ENSOCUG00000024139	TRA2A	54	88.158	ENSSLDG00000025577	tra2a	81	88.158	Seriola_lalandi_dorsalis
ENSOCUG00000024139	TRA2A	100	77.660	ENSSARG00000012900	TRA2A	100	77.660	Sorex_araneus
ENSOCUG00000024139	TRA2A	100	96.167	ENSSPUG00000006143	TRA2A	100	96.167	Sphenodon_punctatus
ENSOCUG00000024139	TRA2A	90	78.967	ENSSPAG00000004184	tra2a	90	78.967	Stegastes_partitus
ENSOCUG00000024139	TRA2A	100	99.291	ENSSSCG00000015387	TRA2A	100	99.291	Sus_scrofa
ENSOCUG00000024139	TRA2A	60	90.000	ENSTGUG00000002795	TRA2A	80	90.952	Taeniopygia_guttata
ENSOCUG00000024139	TRA2A	100	82.979	ENSTBEG00000013773	TRA2A	100	82.979	Tupaia_belangeri
ENSOCUG00000024139	TRA2A	100	98.936	ENSTTRG00000008922	TRA2A	100	98.936	Tursiops_truncatus
ENSOCUG00000024139	TRA2A	64	98.352	ENSUMAG00000001181	TRA2A	94	98.352	Ursus_maritimus
ENSOCUG00000024139	TRA2A	100	85.106	ENSVPAG00000001829	TRA2A	100	85.106	Vicugna_pacos
ENSOCUG00000024139	TRA2A	100	99.291	ENSVVUG00000001045	TRA2A	100	99.291	Vulpes_vulpes
ENSOCUG00000024139	TRA2A	90	82.890	ENSXETG00000007397	tra2a	90	82.890	Xenopus_tropicalis