EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000024367 (Gene tree)
Gene ID: 100343235
Gene Symbol: -
Alias: -
Full Name: ribonuclease P protein subunit p38
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 837 bases
Position: chr16:46589474-46590310
Accession: 100343235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000020506	Ribosomal_L7Ae	PF01248.26	5.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000000110	-	837	XM_002717471	ENSOCUP00000020506	278 (aa)	XP_002717517	G1TTY3

Gene Model

Click here to download ENSOCUG00000024367's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03008	Ribosome biogenesis in eukaryotes	KEGG
ocu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000024367's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000024367	-	100	98.561	ENSOCUG00000022768	-	100	98.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000024367	-	100	75.000	ENSG00000152464	RPP38	100	77.381	Homo_sapiens
ENSOCUG00000024367	-	94	42.908	ENSAPOG00000001240	rpp38	94	42.701	Acanthochromis_polyacanthus
ENSOCUG00000024367	-	100	73.145	ENSAMEG00000018832	RPP38	100	73.145	Ailuropoda_melanoleuca
ENSOCUG00000024367	-	87	42.636	ENSACIG00000011592	rpp38	95	40.214	Amphilophus_citrinellus
ENSOCUG00000024367	-	94	41.608	ENSAOCG00000017293	rpp38	94	41.197	Amphiprion_ocellaris
ENSOCUG00000024367	-	94	43.750	ENSAPEG00000002315	rpp38	94	42.545	Amphiprion_percula
ENSOCUG00000024367	-	96	43.772	ENSATEG00000000731	rpp38	95	43.657	Anabas_testudineus
ENSOCUG00000024367	-	91	52.326	ENSAPLG00000002054	RPP38	91	52.344	Anas_platyrhynchos
ENSOCUG00000024367	-	94	42.007	ENSACLG00000016962	rpp38	94	41.481	Astatotilapia_calliptera
ENSOCUG00000024367	-	94	42.379	ENSACLG00000016958	rpp38	94	41.852	Astatotilapia_calliptera
ENSOCUG00000024367	-	89	42.915	ENSAMXG00000025023	rpp38	87	42.683	Astyanax_mexicanus
ENSOCUG00000024367	-	100	70.070	ENSBTAG00000007702	RPP38	94	70.301	Bos_taurus
ENSOCUG00000024367	-	100	70.318	ENSCAFG00000024373	RPP38	94	69.811	Canis_familiaris
ENSOCUG00000024367	-	100	70.318	ENSCAFG00020008008	RPP38	94	69.811	Canis_lupus_dingo
ENSOCUG00000024367	-	100	69.014	ENSCHIG00000012484	RPP38	94	69.173	Capra_hircus
ENSOCUG00000024367	-	100	72.887	ENSCPOG00000003981	RPP38	94	72.556	Cavia_porcellus
ENSOCUG00000024367	-	100	75.352	ENSCLAG00000010194	RPP38	94	75.188	Chinchilla_lanigera
ENSOCUG00000024367	-	94	77.068	ENSCSAG00000019055	RPP38	94	77.068	Chlorocebus_sabaeus
ENSOCUG00000024367	-	100	75.704	ENSCHOG00000004335	RPP38	94	75.188	Choloepus_hoffmanni
ENSOCUG00000024367	-	100	66.549	ENSCGRG00001001395	Rpp38	94	68.045	Cricetulus_griseus_chok1gshd
ENSOCUG00000024367	-	100	66.549	ENSCGRG00000017441	Rpp38	94	68.045	Cricetulus_griseus_crigri
ENSOCUG00000024367	-	94	42.066	ENSCSEG00000001721	rpp38	94	41.791	Cynoglossus_semilaevis
ENSOCUG00000024367	-	95	41.429	ENSCVAG00000001676	rpp38	94	41.577	Cyprinodon_variegatus
ENSOCUG00000024367	-	94	44.737	ENSDARG00000040350	rpp38	92	44.015	Danio_rerio
ENSOCUG00000024367	-	100	73.592	ENSDNOG00000040314	RPP38	94	72.932	Dasypus_novemcinctus
ENSOCUG00000024367	-	100	68.085	ENSDORG00000009783	Rpp38	93	67.424	Dipodomys_ordii
ENSOCUG00000024367	-	100	71.127	ENSETEG00000002839	RPP38	100	71.127	Echinops_telfairi
ENSOCUG00000024367	-	99	74.286	ENSEASG00005019783	RPP38	93	74.060	Equus_asinus_asinus
ENSOCUG00000024367	-	100	69.718	ENSEEUG00000014677	RPP38	94	69.925	Erinaceus_europaeus
ENSOCUG00000024367	-	87	42.963	ENSELUG00000010160	rpp38	89	41.418	Esox_lucius
ENSOCUG00000024367	-	100	68.551	ENSFCAG00000022449	RPP38	100	68.905	Felis_catus
ENSOCUG00000024367	-	94	50.916	ENSFALG00000014804	RPP38	89	51.724	Ficedula_albicollis
ENSOCUG00000024367	-	100	73.944	ENSFDAG00000018669	RPP38	94	74.060	Fukomys_damarensis
ENSOCUG00000024367	-	95	38.721	ENSFHEG00000013741	rpp38	94	39.437	Fundulus_heteroclitus
ENSOCUG00000024367	-	94	53.383	ENSGALG00000008794	RPP38	88	53.053	Gallus_gallus
ENSOCUG00000024367	-	59	45.732	ENSGACG00000009258	rpp38	97	45.122	Gasterosteus_aculeatus
ENSOCUG00000024367	-	94	42.007	ENSHBUG00000010937	rpp38	94	41.481	Haplochromis_burtoni
ENSOCUG00000024367	-	100	72.887	ENSHGLG00000012144	RPP38	94	72.556	Heterocephalus_glaber_female
ENSOCUG00000024367	-	88	40.486	ENSIPUG00000022879	rpp38	92	38.911	Ictalurus_punctatus
ENSOCUG00000024367	-	100	72.535	ENSSTOG00000025699	RPP38	98	72.535	Ictidomys_tridecemlineatus
ENSOCUG00000024367	-	100	73.239	ENSJJAG00000007523	Rpp38	100	73.239	Jaculus_jaculus
ENSOCUG00000024367	-	87	42.520	ENSKMAG00000003986	rpp38	87	41.502	Kryptolebias_marmoratus
ENSOCUG00000024367	-	92	44.195	ENSLBEG00000006853	rpp38	93	42.966	Labrus_bergylta
ENSOCUG00000024367	-	95	47.735	ENSLACG00000006502	RPP38	94	47.350	Latimeria_chalumnae
ENSOCUG00000024367	-	96	47.312	ENSLOCG00000018347	rpp38	91	46.212	Lepisosteus_oculatus
ENSOCUG00000024367	-	100	77.385	ENSLAFG00000000509	RPP38	100	77.385	Loxodonta_africana
ENSOCUG00000024367	-	94	77.068	ENSMMUG00000007679	RPP38	94	77.068	Macaca_mulatta
ENSOCUG00000024367	-	96	46.545	ENSMAMG00000012774	rpp38	94	45.149	Mastacembelus_armatus
ENSOCUG00000024367	-	94	42.379	ENSMZEG00005003189	rpp38	94	41.852	Maylandia_zebra
ENSOCUG00000024367	-	94	42.379	ENSMZEG00005003200	rpp38	94	41.852	Maylandia_zebra
ENSOCUG00000024367	-	94	53.008	ENSMGAG00000008217	RPP38	88	52.672	Meleagris_gallopavo
ENSOCUG00000024367	-	100	69.014	ENSMAUG00000003644	Rpp38	94	68.797	Mesocricetus_auratus
ENSOCUG00000024367	-	100	70.070	ENSMOCG00000007020	Rpp38	94	69.549	Microtus_ochrogaster
ENSOCUG00000024367	-	93	39.427	ENSMMOG00000003446	rpp38	92	39.623	Mola_mola
ENSOCUG00000024367	-	100	64.085	ENSMODG00000024091	RPP38	94	63.910	Monodelphis_domestica
ENSOCUG00000024367	-	91	43.273	ENSMALG00000002356	rpp38	91	42.105	Monopterus_albus
ENSOCUG00000024367	-	100	71.831	MGP_CAROLIEiJ_G0023133	Rpp38	94	71.429	Mus_caroli
ENSOCUG00000024367	-	100	71.479	ENSMUSG00000049950	Rpp38	94	71.053	Mus_musculus
ENSOCUG00000024367	-	100	71.831	MGP_PahariEiJ_G0019193	Rpp38	94	71.429	Mus_pahari
ENSOCUG00000024367	-	100	70.775	MGP_SPRETEiJ_G0024051	Rpp38	94	70.301	Mus_spretus
ENSOCUG00000024367	-	99	71.174	ENSMPUG00000018523	RPP38	94	70.943	Mustela_putorius_furo
ENSOCUG00000024367	-	94	72.453	ENSMLUG00000002153	RPP38	94	73.585	Myotis_lucifugus
ENSOCUG00000024367	-	100	71.228	ENSNGAG00000011066	Rpp38	94	70.787	Nannospalax_galili
ENSOCUG00000024367	-	94	41.852	ENSNBRG00000006994	rpp38	95	41.852	Neolamprologus_brichardi
ENSOCUG00000024367	-	95	41.007	ENSONIG00000020467	rpp38	93	42.593	Oreochromis_niloticus
ENSOCUG00000024367	-	87	42.857	ENSORLG00000009219	rpp38	91	41.825	Oryzias_latipes
ENSOCUG00000024367	-	87	41.699	ENSORLG00020011503	rpp38	89	40.741	Oryzias_latipes_hni
ENSOCUG00000024367	-	87	42.063	ENSORLG00015017702	rpp38	89	40.530	Oryzias_latipes_hsok
ENSOCUG00000024367	-	87	43.137	ENSOMEG00000005414	rpp38	94	43.015	Oryzias_melastigma
ENSOCUG00000024367	-	100	76.325	ENSOGAG00000008059	RPP38	94	76.226	Otolemur_garnettii
ENSOCUG00000024367	-	100	69.718	ENSOARG00000004534	RPP38	94	69.925	Ovis_aries
ENSOCUG00000024367	-	100	75.352	ENSPPAG00000041577	RPP38	85	75.188	Pan_paniscus
ENSOCUG00000024367	-	100	70.318	ENSPPRG00000015329	RPP38	100	70.318	Panthera_pardus
ENSOCUG00000024367	-	100	69.965	ENSPTIG00000007188	RPP38	100	69.965	Panthera_tigris_altaica
ENSOCUG00000024367	-	100	75.352	ENSPTRG00000002318	RPP38	85	75.188	Pan_troglodytes
ENSOCUG00000024367	-	92	43.494	ENSPKIG00000025652	rpp38	88	43.023	Paramormyrops_kingsleyae
ENSOCUG00000024367	-	96	55.072	ENSPSIG00000001527	RPP38	91	54.264	Pelodiscus_sinensis
ENSOCUG00000024367	-	100	70.423	ENSPEMG00000008375	Rpp38	94	69.925	Peromyscus_maniculatus_bairdii
ENSOCUG00000024367	-	100	65.493	ENSPCIG00000009096	RPP38	88	65.038	Phascolarctos_cinereus
ENSOCUG00000024367	-	63	47.027	ENSPFOG00000016823	rpp38	83	45.604	Poecilia_formosa
ENSOCUG00000024367	-	89	39.286	ENSPLAG00000007626	rpp38	88	39.852	Poecilia_latipinna
ENSOCUG00000024367	-	68	40.625	ENSPMEG00000020392	rpp38	87	36.641	Poecilia_mexicana
ENSOCUG00000024367	-	89	40.152	ENSPREG00000017744	rpp38	90	39.474	Poecilia_reticulata
ENSOCUG00000024367	-	100	76.056	ENSPPYG00000002113	RPP38	94	76.316	Pongo_abelii
ENSOCUG00000024367	-	94	73.308	ENSPVAG00000007155	RPP38	94	73.308	Pteropus_vampyrus
ENSOCUG00000024367	-	94	42.379	ENSPNYG00000004293	rpp38	94	41.852	Pundamilia_nyererei
ENSOCUG00000024367	-	88	43.673	ENSPNAG00000010633	rpp38	91	43.307	Pygocentrus_nattereri
ENSOCUG00000024367	-	98	69.784	ENSRNOG00000038025	Rpp38	94	69.057	Rattus_norvegicus
ENSOCUG00000024367	-	100	66.901	ENSSHAG00000015529	RPP38	94	65.789	Sarcophilus_harrisii
ENSOCUG00000024367	-	94	45.161	ENSSMAG00000018276	rpp38	93	44.853	Scophthalmus_maximus
ENSOCUG00000024367	-	94	43.911	ENSSDUG00000001651	rpp38	95	42.701	Seriola_dumerili
ENSOCUG00000024367	-	94	42.751	ENSSLDG00000014355	rpp38	95	41.304	Seriola_lalandi_dorsalis
ENSOCUG00000024367	-	100	56.294	ENSSARG00000012099	RPP38	93	54.104	Sorex_araneus
ENSOCUG00000024367	-	96	52.000	ENSSPUG00000008560	-	91	49.807	Sphenodon_punctatus
ENSOCUG00000024367	-	99	56.140	ENSSPUG00000018363	-	93	54.682	Sphenodon_punctatus
ENSOCUG00000024367	-	100	56.446	ENSSPUG00000005237	-	94	55.019	Sphenodon_punctatus
ENSOCUG00000024367	-	94	44.569	ENSSPAG00000020387	rpp38	94	44.151	Stegastes_partitus
ENSOCUG00000024367	-	100	69.338	ENSSSCG00000027110	RPP38	94	68.773	Sus_scrofa
ENSOCUG00000024367	-	91	51.538	ENSTGUG00000001366	RPP38	91	51.550	Taeniopygia_guttata
ENSOCUG00000024367	-	90	45.385	ENSTNIG00000001334	rpp38	95	44.569	Tetraodon_nigroviridis
ENSOCUG00000024367	-	100	68.310	ENSTTRG00000004420	RPP38	94	67.293	Tursiops_truncatus
ENSOCUG00000024367	-	100	73.852	ENSUAMG00000002618	RPP38	94	73.962	Ursus_americanus
ENSOCUG00000024367	-	100	71.930	ENSUMAG00000012382	RPP38	100	72.982	Ursus_maritimus
ENSOCUG00000024367	-	100	69.965	ENSVVUG00000005272	RPP38	94	69.057	Vulpes_vulpes
ENSOCUG00000024367	-	92	49.630	ENSXETG00000003419	rpp38	93	49.248	Xenopus_tropicalis