EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000024604 (Gene tree)
Gene ID: 100345155
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 1248 bases
Position: chr4:53489961-53491208
Accession: 100345155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000024084	zf-RNPHF	PF08080.12	1.2e-21	1	1
ENSOCUP00000024084	RRM_1	PF00076.22	4.1e-26	1	2
ENSOCUP00000024084	RRM_1	PF00076.22	4.1e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000029699	-	1248	XM_002711339	ENSOCUP00000024084	415 (aa)	XP_002711385	G1U3W7

Gene Model

Click here to download ENSOCUG00000024604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000024604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000024604	-	99	71.671	ENSOCUG00000017150	HNRNPH1	97	70.575
ENSOCUG00000024604	-	64	60.000	ENSOCUG00000010029	GRSF1	71	60.000
ENSOCUG00000024604	-	100	94.217	ENSOCUG00000024719	-	100	94.217
ENSOCUG00000024604	-	99	69.734	ENSOCUG00000010629	-	97	68.966
ENSOCUG00000024604	-	57	68.595	ENSOCUG00000004443	HNRNPH3	97	55.488
ENSOCUG00000024604	-	99	69.734	ENSOCUG00000006387	-	97	68.966

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000024604	-	100	93.253	ENSG00000169813	HNRNPF	100	93.253	Homo_sapiens
ENSOCUG00000024604	-	100	92.530	ENSAMEG00000018983	HNRNPF	100	92.530	Ailuropoda_melanoleuca
ENSOCUG00000024604	-	100	90.361	ENSANAG00000033285	-	100	90.361	Aotus_nancymaae
ENSOCUG00000024604	-	89	78.919	ENSANAG00000033452	-	89	78.919	Aotus_nancymaae
ENSOCUG00000024604	-	100	75.656	ENSBTAG00000020513	-	100	75.656	Bos_taurus
ENSOCUG00000024604	-	100	91.566	ENSBTAG00000008853	HNRNPF	100	91.566	Bos_taurus
ENSOCUG00000024604	-	100	93.253	ENSCJAG00000008291	HNRNPF	100	93.253	Callithrix_jacchus
ENSOCUG00000024604	-	100	92.530	ENSCAFG00000007044	HNRNPF	100	92.530	Canis_familiaris
ENSOCUG00000024604	-	97	69.193	ENSCHIG00000022971	-	99	69.193	Capra_hircus
ENSOCUG00000024604	-	100	91.566	ENSCHIG00000006714	HNRNPF	100	91.566	Capra_hircus
ENSOCUG00000024604	-	100	79.567	ENSTSYG00000002112	-	100	79.567	Carlito_syrichta
ENSOCUG00000024604	-	100	92.530	ENSTSYG00000030439	-	100	92.530	Carlito_syrichta
ENSOCUG00000024604	-	99	92.995	ENSCAPG00000011521	HNRNPF	99	92.995	Cavia_aperea
ENSOCUG00000024604	-	99	92.995	ENSCPOG00000003678	HNRNPF	99	92.995	Cavia_porcellus
ENSOCUG00000024604	-	100	75.181	ENSCCAG00000028687	-	100	75.181	Cebus_capucinus
ENSOCUG00000024604	-	100	93.012	ENSCCAG00000031457	-	100	93.012	Cebus_capucinus
ENSOCUG00000024604	-	99	92.995	ENSCLAG00000005161	HNRNPF	99	92.995	Chinchilla_lanigera
ENSOCUG00000024604	-	100	91.807	ENSCANG00000003086	-	100	91.807	Colobus_angolensis_palliatus
ENSOCUG00000024604	-	100	92.771	ENSCGRG00001016276	Hnrnpf	100	92.771	Cricetulus_griseus_chok1gshd
ENSOCUG00000024604	-	94	69.744	ENSCGRG00001016206	-	88	69.744	Cricetulus_griseus_chok1gshd
ENSOCUG00000024604	-	100	88.193	ENSDNOG00000030849	-	100	88.193	Dasypus_novemcinctus
ENSOCUG00000024604	-	100	84.819	ENSDORG00000008260	-	100	84.819	Dipodomys_ordii
ENSOCUG00000024604	-	100	83.373	ENSDORG00000005431	-	100	83.373	Dipodomys_ordii
ENSOCUG00000024604	-	100	91.325	ENSDORG00000024298	-	100	91.325	Dipodomys_ordii
ENSOCUG00000024604	-	100	88.916	ENSDORG00000024936	-	100	88.916	Dipodomys_ordii
ENSOCUG00000024604	-	100	92.771	ENSEASG00005006903	HNRNPF	100	92.771	Equus_asinus_asinus
ENSOCUG00000024604	-	100	89.157	ENSECAG00000003229	HNRNPF	100	89.157	Equus_caballus
ENSOCUG00000024604	-	100	92.530	ENSFCAG00000028219	-	100	92.530	Felis_catus
ENSOCUG00000024604	-	95	84.478	ENSFDAG00000007858	-	98	84.478	Fukomys_damarensis
ENSOCUG00000024604	-	99	76.087	ENSFDAG00000015308	-	99	76.087	Fukomys_damarensis
ENSOCUG00000024604	-	99	92.995	ENSFDAG00000011431	-	99	92.995	Fukomys_damarensis
ENSOCUG00000024604	-	90	93.067	ENSGGOG00000010867	HNRNPF	93	93.067	Gorilla_gorilla
ENSOCUG00000024604	-	99	83.092	ENSHGLG00000017607	-	100	83.092	Heterocephalus_glaber_female
ENSOCUG00000024604	-	91	88.564	ENSHGLG00000014139	-	97	88.564	Heterocephalus_glaber_female
ENSOCUG00000024604	-	100	89.398	ENSHGLG00000010276	-	100	89.398	Heterocephalus_glaber_female
ENSOCUG00000024604	-	99	92.754	ENSHGLG00000000147	-	99	92.754	Heterocephalus_glaber_female
ENSOCUG00000024604	-	97	91.832	ENSHGLG00100020825	-	100	91.832	Heterocephalus_glaber_male
ENSOCUG00000024604	-	99	88.647	ENSHGLG00100019558	-	100	88.647	Heterocephalus_glaber_male
ENSOCUG00000024604	-	95	85.354	ENSHGLG00100019910	-	100	85.354	Heterocephalus_glaber_male
ENSOCUG00000024604	-	99	89.130	ENSHGLG00100019572	-	99	89.130	Heterocephalus_glaber_male
ENSOCUG00000024604	-	91	81.383	ENSHGLG00100010905	-	97	81.383	Heterocephalus_glaber_male
ENSOCUG00000024604	-	100	83.894	ENSSTOG00000022853	-	100	83.894	Ictidomys_tridecemlineatus
ENSOCUG00000024604	-	100	78.657	ENSSTOG00000023820	-	100	78.657	Ictidomys_tridecemlineatus
ENSOCUG00000024604	-	100	93.494	ENSSTOG00000025560	-	100	93.494	Ictidomys_tridecemlineatus
ENSOCUG00000024604	-	100	83.614	ENSJJAG00000017385	-	100	83.614	Jaculus_jaculus
ENSOCUG00000024604	-	100	59.759	ENSJJAG00000014424	-	100	59.759	Jaculus_jaculus
ENSOCUG00000024604	-	99	88.441	ENSJJAG00000014334	-	99	88.441	Jaculus_jaculus
ENSOCUG00000024604	-	100	69.139	ENSJJAG00000000554	-	100	69.139	Jaculus_jaculus
ENSOCUG00000024604	-	100	77.831	ENSJJAG00000022288	-	100	77.831	Jaculus_jaculus
ENSOCUG00000024604	-	99	90.361	ENSLAFG00000000424	HNRNPF	99	90.361	Loxodonta_africana
ENSOCUG00000024604	-	100	93.253	ENSMFAG00000021184	HNRNPF	100	93.253	Macaca_fascicularis
ENSOCUG00000024604	-	100	93.253	ENSMMUG00000020982	HNRNPF	100	93.253	Macaca_mulatta
ENSOCUG00000024604	-	100	93.253	ENSMLEG00000023515	HNRNPF	100	93.253	Mandrillus_leucophaeus
ENSOCUG00000024604	-	100	92.771	ENSMAUG00000007892	Hnrnpf	100	92.771	Mesocricetus_auratus
ENSOCUG00000024604	-	99	75.534	ENSMICG00000044171	-	99	75.534	Microcebus_murinus
ENSOCUG00000024604	-	99	75.604	ENSMICG00000043739	-	99	75.604	Microcebus_murinus
ENSOCUG00000024604	-	100	91.566	ENSMOCG00000014915	Hnrnpf	100	91.566	Microtus_ochrogaster
ENSOCUG00000024604	-	100	92.771	ENSMUSG00000042079	Hnrnpf	100	92.771	Mus_musculus
ENSOCUG00000024604	-	100	92.048	MGP_PahariEiJ_G0026903	-	100	92.048	Mus_pahari
ENSOCUG00000024604	-	96	92.714	ENSMPUG00000017283	HNRNPF	98	92.714	Mustela_putorius_furo
ENSOCUG00000024604	-	100	89.904	ENSMLUG00000007261	HNRNPF	100	89.904	Myotis_lucifugus
ENSOCUG00000024604	-	100	92.289	ENSNGAG00000010409	-	100	92.289	Nannospalax_galili
ENSOCUG00000024604	-	100	76.145	ENSNGAG00000014079	-	100	76.145	Nannospalax_galili
ENSOCUG00000024604	-	100	66.024	ENSNGAG00000009482	-	100	66.024	Nannospalax_galili
ENSOCUG00000024604	-	100	93.253	ENSNLEG00000019098	HNRNPF	100	93.253	Nomascus_leucogenys
ENSOCUG00000024604	-	99	92.995	ENSODEG00000019266	-	99	92.995	Octodon_degus
ENSOCUG00000024604	-	99	86.165	ENSODEG00000002359	-	99	86.165	Octodon_degus
ENSOCUG00000024604	-	100	89.157	ENSOGAG00000030480	-	100	89.157	Otolemur_garnettii
ENSOCUG00000024604	-	99	86.747	ENSOGAG00000013734	-	99	86.747	Otolemur_garnettii
ENSOCUG00000024604	-	100	76.145	ENSOARG00000016658	-	100	76.145	Ovis_aries
ENSOCUG00000024604	-	88	92.643	ENSOARG00000003995	HNRNPF	92	92.643	Ovis_aries
ENSOCUG00000024604	-	100	92.530	ENSPPRG00000021222	HNRNPF	100	92.530	Panthera_pardus
ENSOCUG00000024604	-	100	92.530	ENSPTIG00000009644	HNRNPF	100	92.530	Panthera_tigris_altaica
ENSOCUG00000024604	-	100	93.253	ENSPTRG00000002446	HNRNPF	100	93.253	Pan_troglodytes
ENSOCUG00000024604	-	100	93.012	ENSPANG00000002212	HNRNPF	100	93.012	Papio_anubis
ENSOCUG00000024604	-	100	93.253	ENSPPYG00000002212	HNRNPF	100	93.253	Pongo_abelii
ENSOCUG00000024604	-	100	89.904	ENSPCAG00000013169	HNRNPF	100	89.904	Procavia_capensis
ENSOCUG00000024604	-	100	91.807	ENSPVAG00000011646	HNRNPF	100	91.807	Pteropus_vampyrus
ENSOCUG00000024604	-	100	92.771	ENSRNOG00000014562	Hnrnpf	100	92.771	Rattus_norvegicus
ENSOCUG00000024604	-	100	93.253	ENSRROG00000001235	HNRNPF	100	93.253	Rhinopithecus_roxellana
ENSOCUG00000024604	-	100	93.253	ENSSBOG00000018361	HNRNPF	100	93.253	Saimiri_boliviensis_boliviensis
ENSOCUG00000024604	-	100	92.530	ENSSARG00000010059	HNRNPF	100	92.530	Sorex_araneus
ENSOCUG00000024604	-	100	91.807	ENSSSCG00000010203	-	100	91.807	Sus_scrofa
ENSOCUG00000024604	-	100	54.785	ENSSSCG00000024956	-	96	54.785	Sus_scrofa
ENSOCUG00000024604	-	98	69.136	ENSTBEG00000016094	HNRNPF	100	69.136	Tupaia_belangeri
ENSOCUG00000024604	-	100	92.530	ENSUAMG00000000455	HNRNPF	100	92.530	Ursus_americanus
ENSOCUG00000024604	-	100	92.530	ENSUMAG00000016485	HNRNPF	100	92.530	Ursus_maritimus
ENSOCUG00000024604	-	100	92.530	ENSVVUG00000021261	HNRNPF	100	92.530	Vulpes_vulpes