EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000024719 (Gene tree)
Gene ID: 100339686
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein F
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 1248 bases
Position: chrGL018805:588394-589641
Accession: 100339686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000018304	zf-RNPHF	PF08080.12	9.7e-22	1	1
ENSOCUP00000018304	RRM_1	PF00076.22	1.6e-28	1	2
ENSOCUP00000018304	RRM_1	PF00076.22	1.6e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000001474	-	1248	-	ENSOCUP00000018304	415 (aa)	XP_008248277	G1TMU2

Gene Model

Click here to download ENSOCUG00000024719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000024719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000024719	-	99	75.061	ENSOCUG00000017150	HNRNPH1	97	74.253
ENSOCUG00000024719	-	96	72.662	ENSOCUG00000006387	-	97	72.644
ENSOCUG00000024719	-	96	72.662	ENSOCUG00000010629	-	97	72.644
ENSOCUG00000024719	-	51	71.901	ENSOCUG00000004443	HNRNPH3	93	58.232
ENSOCUG00000024719	-	100	94.217	ENSOCUG00000024604	-	100	94.217
ENSOCUG00000024719	-	87	41.322	ENSOCUG00000010029	GRSF1	71	41.322

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000024719	-	100	98.795	ENSG00000169813	HNRNPF	100	98.795	Homo_sapiens
ENSOCUG00000024719	-	100	98.072	ENSAMEG00000018983	HNRNPF	100	98.072	Ailuropoda_melanoleuca
ENSOCUG00000024719	-	89	83.514	ENSANAG00000033452	-	89	83.514	Aotus_nancymaae
ENSOCUG00000024719	-	100	95.663	ENSANAG00000033285	-	100	95.663	Aotus_nancymaae
ENSOCUG00000024719	-	100	97.108	ENSBTAG00000008853	HNRNPF	100	97.108	Bos_taurus
ENSOCUG00000024719	-	100	79.475	ENSBTAG00000020513	-	100	79.475	Bos_taurus
ENSOCUG00000024719	-	100	98.795	ENSCJAG00000008291	HNRNPF	100	98.795	Callithrix_jacchus
ENSOCUG00000024719	-	100	98.072	ENSCAFG00000007044	HNRNPF	100	98.072	Canis_familiaris
ENSOCUG00000024719	-	97	72.861	ENSCHIG00000022971	-	99	72.861	Capra_hircus
ENSOCUG00000024719	-	100	97.108	ENSCHIG00000006714	HNRNPF	100	97.108	Capra_hircus
ENSOCUG00000024719	-	100	98.072	ENSTSYG00000030439	-	100	98.072	Carlito_syrichta
ENSOCUG00000024719	-	100	83.894	ENSTSYG00000002112	-	100	83.894	Carlito_syrichta
ENSOCUG00000024719	-	99	98.551	ENSCAPG00000011521	HNRNPF	99	98.551	Cavia_aperea
ENSOCUG00000024719	-	99	98.551	ENSCPOG00000003678	HNRNPF	99	98.551	Cavia_porcellus
ENSOCUG00000024719	-	100	79.277	ENSCCAG00000028687	-	100	79.277	Cebus_capucinus
ENSOCUG00000024719	-	100	98.554	ENSCCAG00000031457	-	100	98.554	Cebus_capucinus
ENSOCUG00000024719	-	99	98.551	ENSCLAG00000005161	HNRNPF	99	98.551	Chinchilla_lanigera
ENSOCUG00000024719	-	100	97.349	ENSCANG00000003086	-	100	97.349	Colobus_angolensis_palliatus
ENSOCUG00000024719	-	94	73.590	ENSCGRG00001016206	-	88	73.590	Cricetulus_griseus_chok1gshd
ENSOCUG00000024719	-	100	98.313	ENSCGRG00001016276	Hnrnpf	100	98.313	Cricetulus_griseus_chok1gshd
ENSOCUG00000024719	-	100	93.976	ENSDNOG00000030849	-	100	93.976	Dasypus_novemcinctus
ENSOCUG00000024719	-	100	96.867	ENSDORG00000024298	-	100	96.867	Dipodomys_ordii
ENSOCUG00000024719	-	100	94.217	ENSDORG00000024936	-	100	94.217	Dipodomys_ordii
ENSOCUG00000024719	-	100	88.434	ENSDORG00000005431	-	100	88.434	Dipodomys_ordii
ENSOCUG00000024719	-	100	90.120	ENSDORG00000008260	-	100	90.120	Dipodomys_ordii
ENSOCUG00000024719	-	100	98.313	ENSEASG00005006903	HNRNPF	100	98.313	Equus_asinus_asinus
ENSOCUG00000024719	-	100	94.458	ENSECAG00000003229	HNRNPF	100	94.458	Equus_caballus
ENSOCUG00000024719	-	100	98.072	ENSFCAG00000028219	-	100	98.072	Felis_catus
ENSOCUG00000024719	-	99	89.059	ENSFDAG00000007858	-	98	89.059	Fukomys_damarensis
ENSOCUG00000024719	-	99	98.551	ENSFDAG00000011431	-	99	98.551	Fukomys_damarensis
ENSOCUG00000024719	-	99	80.193	ENSFDAG00000015308	-	99	80.193	Fukomys_damarensis
ENSOCUG00000024719	-	90	98.667	ENSGGOG00000010867	HNRNPF	93	98.667	Gorilla_gorilla
ENSOCUG00000024719	-	99	87.923	ENSHGLG00000017607	-	100	87.923	Heterocephalus_glaber_female
ENSOCUG00000024719	-	100	94.458	ENSHGLG00000010276	-	100	94.458	Heterocephalus_glaber_female
ENSOCUG00000024719	-	98	93.617	ENSHGLG00000014139	-	97	93.617	Heterocephalus_glaber_female
ENSOCUG00000024719	-	99	98.309	ENSHGLG00000000147	-	99	98.309	Heterocephalus_glaber_female
ENSOCUG00000024719	-	99	94.203	ENSHGLG00100019572	-	99	94.203	Heterocephalus_glaber_male
ENSOCUG00000024719	-	99	97.277	ENSHGLG00100020825	-	100	97.277	Heterocephalus_glaber_male
ENSOCUG00000024719	-	99	90.152	ENSHGLG00100019910	-	100	90.152	Heterocephalus_glaber_male
ENSOCUG00000024719	-	91	86.436	ENSHGLG00100010905	-	97	86.436	Heterocephalus_glaber_male
ENSOCUG00000024719	-	99	93.720	ENSHGLG00100019558	-	100	93.720	Heterocephalus_glaber_male
ENSOCUG00000024719	-	100	88.221	ENSSTOG00000022853	-	100	88.221	Ictidomys_tridecemlineatus
ENSOCUG00000024719	-	100	99.036	ENSSTOG00000025560	-	100	99.036	Ictidomys_tridecemlineatus
ENSOCUG00000024719	-	100	83.453	ENSSTOG00000023820	-	100	83.453	Ictidomys_tridecemlineatus
ENSOCUG00000024719	-	98	94.086	ENSJJAG00000014334	-	99	94.086	Jaculus_jaculus
ENSOCUG00000024719	-	100	63.373	ENSJJAG00000014424	-	100	63.373	Jaculus_jaculus
ENSOCUG00000024719	-	100	87.952	ENSJJAG00000017385	-	100	87.952	Jaculus_jaculus
ENSOCUG00000024719	-	100	81.687	ENSJJAG00000022288	-	100	81.687	Jaculus_jaculus
ENSOCUG00000024719	-	100	73.445	ENSJJAG00000000554	-	100	73.445	Jaculus_jaculus
ENSOCUG00000024719	-	99	96.145	ENSLAFG00000000424	HNRNPF	99	96.145	Loxodonta_africana
ENSOCUG00000024719	-	100	98.795	ENSMFAG00000021184	HNRNPF	100	98.795	Macaca_fascicularis
ENSOCUG00000024719	-	100	98.795	ENSMMUG00000020982	HNRNPF	100	98.795	Macaca_mulatta
ENSOCUG00000024719	-	100	98.795	ENSMLEG00000023515	HNRNPF	100	98.795	Mandrillus_leucophaeus
ENSOCUG00000024719	-	100	98.313	ENSMAUG00000007892	Hnrnpf	100	98.313	Mesocricetus_auratus
ENSOCUG00000024719	-	99	80.760	ENSMICG00000044171	-	99	80.760	Microcebus_murinus
ENSOCUG00000024719	-	99	80.918	ENSMICG00000043739	-	99	80.918	Microcebus_murinus
ENSOCUG00000024719	-	100	97.108	ENSMOCG00000014915	Hnrnpf	100	97.108	Microtus_ochrogaster
ENSOCUG00000024719	-	100	98.313	ENSMUSG00000042079	Hnrnpf	100	98.313	Mus_musculus
ENSOCUG00000024719	-	100	97.108	MGP_PahariEiJ_G0026903	-	100	97.108	Mus_pahari
ENSOCUG00000024719	-	99	98.246	ENSMPUG00000017283	HNRNPF	99	98.246	Mustela_putorius_furo
ENSOCUG00000024719	-	100	95.433	ENSMLUG00000007261	HNRNPF	100	95.433	Myotis_lucifugus
ENSOCUG00000024719	-	100	80.241	ENSNGAG00000014079	-	100	80.241	Nannospalax_galili
ENSOCUG00000024719	-	100	97.831	ENSNGAG00000010409	-	100	97.831	Nannospalax_galili
ENSOCUG00000024719	-	100	69.880	ENSNGAG00000009482	-	100	69.880	Nannospalax_galili
ENSOCUG00000024719	-	100	98.795	ENSNLEG00000019098	HNRNPF	100	98.795	Nomascus_leucogenys
ENSOCUG00000024719	-	99	91.505	ENSODEG00000002359	-	99	91.505	Octodon_degus
ENSOCUG00000024719	-	99	98.551	ENSODEG00000019266	-	99	98.551	Octodon_degus
ENSOCUG00000024719	-	100	94.217	ENSOGAG00000030480	-	100	94.217	Otolemur_garnettii
ENSOCUG00000024719	-	99	92.048	ENSOGAG00000013734	-	99	92.048	Otolemur_garnettii
ENSOCUG00000024719	-	99	98.093	ENSOARG00000003995	HNRNPF	92	98.093	Ovis_aries
ENSOCUG00000024719	-	100	80.000	ENSOARG00000016658	-	100	80.000	Ovis_aries
ENSOCUG00000024719	-	100	98.072	ENSPPRG00000021222	HNRNPF	100	98.072	Panthera_pardus
ENSOCUG00000024719	-	100	98.072	ENSPTIG00000009644	HNRNPF	100	98.072	Panthera_tigris_altaica
ENSOCUG00000024719	-	100	98.795	ENSPTRG00000002446	HNRNPF	100	98.795	Pan_troglodytes
ENSOCUG00000024719	-	100	98.554	ENSPANG00000002212	HNRNPF	100	98.554	Papio_anubis
ENSOCUG00000024719	-	100	98.795	ENSPPYG00000002212	HNRNPF	100	98.795	Pongo_abelii
ENSOCUG00000024719	-	100	95.433	ENSPCAG00000013169	HNRNPF	100	95.433	Procavia_capensis
ENSOCUG00000024719	-	100	96.867	ENSPVAG00000011646	HNRNPF	100	96.867	Pteropus_vampyrus
ENSOCUG00000024719	-	100	98.313	ENSRNOG00000014562	Hnrnpf	100	98.313	Rattus_norvegicus
ENSOCUG00000024719	-	100	98.795	ENSRROG00000001235	HNRNPF	100	98.795	Rhinopithecus_roxellana
ENSOCUG00000024719	-	100	98.795	ENSSBOG00000018361	HNRNPF	100	98.795	Saimiri_boliviensis_boliviensis
ENSOCUG00000024719	-	100	97.831	ENSSARG00000010059	HNRNPF	100	97.831	Sorex_araneus
ENSOCUG00000024719	-	100	97.349	ENSSSCG00000010203	-	100	97.349	Sus_scrofa
ENSOCUG00000024719	-	100	58.134	ENSSSCG00000024956	-	96	58.134	Sus_scrofa
ENSOCUG00000024719	-	98	72.346	ENSTBEG00000016094	HNRNPF	100	72.346	Tupaia_belangeri
ENSOCUG00000024719	-	100	98.072	ENSUAMG00000000455	HNRNPF	100	98.072	Ursus_americanus
ENSOCUG00000024719	-	100	98.072	ENSUMAG00000016485	HNRNPF	100	98.072	Ursus_maritimus
ENSOCUG00000024719	-	100	98.072	ENSVVUG00000021261	HNRNPF	100	98.072	Vulpes_vulpes