EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000025183 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 1386 bases
Position: chrGL018728:913218-914603
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000020212	TUDOR	PF00567.24	3.8e-05	1	1
ENSOCUP00000020212	SMN	PF06003.12	5.1e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000024474	-	1314	-	ENSOCUP00000020212	271 (aa)	-	G1TT42

Gene Model

Click here to download ENSOCUG00000025183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000025183's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000025183	-	99	80.602	ENSOCUG00000026649	-	99	84.281
ENSOCUG00000025183	-	100	85.763	ENSOCUG00000017097	-	99	86.054

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000025183	-	96	78.873	ENSG00000205571	SMN2	87	95.000	Homo_sapiens
ENSOCUG00000025183	-	96	78.873	ENSG00000172062	SMN1	99	78.644	Homo_sapiens
ENSOCUG00000025183	-	92	43.972	ENSAPOG00000011324	smn1	94	42.599	Acanthochromis_polyacanthus
ENSOCUG00000025183	-	97	79.021	ENSAMEG00000003316	-	96	78.571	Ailuropoda_melanoleuca
ENSOCUG00000025183	-	88	41.852	ENSACIG00000019772	-	97	39.925	Amphilophus_citrinellus
ENSOCUG00000025183	-	92	42.238	ENSAOCG00000024444	smn1	94	41.993	Amphiprion_ocellaris
ENSOCUG00000025183	-	92	43.321	ENSAPEG00000016504	smn1	94	42.349	Amphiprion_percula
ENSOCUG00000025183	-	89	43.369	ENSATEG00000002182	smn1	79	42.545	Anabas_testudineus
ENSOCUG00000025183	-	75	54.854	ENSAPLG00000010912	-	97	53.431	Anas_platyrhynchos
ENSOCUG00000025183	-	99	46.644	ENSACAG00000010017	-	99	49.833	Anolis_carolinensis
ENSOCUG00000025183	-	99	83.764	ENSANAG00000032133	-	99	83.764	Aotus_nancymaae
ENSOCUG00000025183	-	90	41.606	ENSACLG00000007308	smn1	90	42.279	Astatotilapia_calliptera
ENSOCUG00000025183	-	98	76.408	ENSBTAG00000005743	SMN2	99	75.342	Bos_taurus
ENSOCUG00000025183	-	96	77.465	ENSCJAG00000016290	-	99	80.690	Callithrix_jacchus
ENSOCUG00000025183	-	96	79.930	ENSCAFG00000007812	SMN	99	78.912	Canis_familiaris
ENSOCUG00000025183	-	96	80.212	ENSCAFG00020019229	-	93	78.912	Canis_lupus_dingo
ENSOCUG00000025183	-	96	78.521	ENSCHIG00000015559	-	99	75.503	Capra_hircus
ENSOCUG00000025183	-	99	78.840	ENSTSYG00000012058	-	100	83.673	Carlito_syrichta
ENSOCUG00000025183	-	81	69.091	ENSCAPG00000011021	-	95	68.018	Cavia_aperea
ENSOCUG00000025183	-	100	72.483	ENSCPOG00000036973	-	99	71.380	Cavia_porcellus
ENSOCUG00000025183	-	100	71.429	ENSCPOG00000012328	-	99	70.333	Cavia_porcellus
ENSOCUG00000025183	-	96	76.056	ENSCCAG00000018127	-	99	79.310	Cebus_capucinus
ENSOCUG00000025183	-	96	79.577	ENSCATG00000037002	-	99	79.322	Cercocebus_atys
ENSOCUG00000025183	-	99	71.096	ENSCLAG00000000284	-	99	70.432	Chinchilla_lanigera
ENSOCUG00000025183	-	96	79.930	ENSCSAG00000015688	-	99	79.661	Chlorocebus_sabaeus
ENSOCUG00000025183	-	99	52.685	ENSCPBG00000010968	-	90	57.200	Chrysemys_picta_bellii
ENSOCUG00000025183	-	96	79.930	ENSCANG00000038242	-	100	79.078	Colobus_angolensis_palliatus
ENSOCUG00000025183	-	95	73.592	ENSCANG00000033324	-	95	73.239	Colobus_angolensis_palliatus
ENSOCUG00000025183	-	99	68.401	ENSCGRG00001016998	-	99	68.773	Cricetulus_griseus_chok1gshd
ENSOCUG00000025183	-	99	74.744	ENSCGRG00001017959	-	99	74.744	Cricetulus_griseus_chok1gshd
ENSOCUG00000025183	-	99	74.744	ENSCGRG00000007698	Smn1	99	74.744	Cricetulus_griseus_crigri
ENSOCUG00000025183	-	78	44.105	ENSCSEG00000015227	smn1	85	46.122	Cynoglossus_semilaevis
ENSOCUG00000025183	-	93	43.060	ENSCVAG00000007498	smn1	95	40.860	Cyprinodon_variegatus
ENSOCUG00000025183	-	76	47.143	ENSDARG00000018494	smn1	71	45.455	Danio_rerio
ENSOCUG00000025183	-	91	82.927	ENSDNOG00000007283	-	100	82.927	Dasypus_novemcinctus
ENSOCUG00000025183	-	77	58.120	ENSDNOG00000045949	-	81	56.995	Dasypus_novemcinctus
ENSOCUG00000025183	-	100	84.615	ENSDORG00000007082	Smn1	99	84.191	Dipodomys_ordii
ENSOCUG00000025183	-	68	62.981	ENSETEG00000001406	-	93	60.622	Echinops_telfairi
ENSOCUG00000025183	-	95	71.071	ENSEASG00005018000	-	98	71.071	Equus_asinus_asinus
ENSOCUG00000025183	-	96	79.577	ENSECAG00000015215	-	100	78.644	Equus_caballus
ENSOCUG00000025183	-	86	76.724	ENSEEUG00000015777	-	91	77.155	Erinaceus_europaeus
ENSOCUG00000025183	-	92	46.479	ENSELUG00000018067	smn1	94	42.143	Esox_lucius
ENSOCUG00000025183	-	100	77.966	ENSFCAG00000028292	SMN	99	82.192	Felis_catus
ENSOCUG00000025183	-	89	55.738	ENSFALG00000012320	-	83	55.144	Ficedula_albicollis
ENSOCUG00000025183	-	100	72.185	ENSFDAG00000017683	-	99	72.093	Fukomys_damarensis
ENSOCUG00000025183	-	95	41.135	ENSGMOG00000017279	smn1	66	40.887	Gadus_morhua
ENSOCUG00000025183	-	89	54.321	ENSGALG00000002430	SMN	95	49.091	Gallus_gallus
ENSOCUG00000025183	-	92	44.061	ENSGAFG00000009501	smn1	94	40.860	Gambusia_affinis
ENSOCUG00000025183	-	92	41.007	ENSGACG00000010584	smn1	91	41.241	Gasterosteus_aculeatus
ENSOCUG00000025183	-	98	51.361	ENSGAGG00000011374	-	99	51.020	Gopherus_agassizii
ENSOCUG00000025183	-	94	66.192	ENSGGOG00000003872	-	100	66.667	Gorilla_gorilla
ENSOCUG00000025183	-	59	73.913	ENSGGOG00000026704	-	91	74.359	Gorilla_gorilla
ENSOCUG00000025183	-	92	41.091	ENSHBUG00000013987	smn1	94	43.478	Haplochromis_burtoni
ENSOCUG00000025183	-	99	70.199	ENSHGLG00000001018	-	99	69.767	Heterocephalus_glaber_female
ENSOCUG00000025183	-	100	70.169	ENSHGLG00000001905	-	99	70.345	Heterocephalus_glaber_female
ENSOCUG00000025183	-	96	69.965	ENSHGLG00100018676	-	99	70.144	Heterocephalus_glaber_male
ENSOCUG00000025183	-	99	70.199	ENSHGLG00100011252	-	99	69.767	Heterocephalus_glaber_male
ENSOCUG00000025183	-	89	39.928	ENSHCOG00000017136	smn1	87	39.326	Hippocampus_comes
ENSOCUG00000025183	-	94	43.796	ENSIPUG00000012580	smn1	86	41.429	Ictalurus_punctatus
ENSOCUG00000025183	-	90	80.669	ENSSTOG00000012288	-	100	79.078	Ictidomys_tridecemlineatus
ENSOCUG00000025183	-	55	64.000	ENSJJAG00000014853	-	89	64.238	Jaculus_jaculus
ENSOCUG00000025183	-	92	43.571	ENSKMAG00000007239	smn1	94	43.015	Kryptolebias_marmoratus
ENSOCUG00000025183	-	92	44.366	ENSLBEG00000022550	smn1	94	44.484	Labrus_bergylta
ENSOCUG00000025183	-	75	38.208	ENSLACG00000009808	-	71	38.393	Latimeria_chalumnae
ENSOCUG00000025183	-	74	49.751	ENSLOCG00000011339	smn1	68	45.894	Lepisosteus_oculatus
ENSOCUG00000025183	-	100	75.333	ENSLAFG00000003425	-	97	75.333	Loxodonta_africana
ENSOCUG00000025183	-	96	75.704	ENSMFAG00000008812	-	99	75.593	Macaca_fascicularis
ENSOCUG00000025183	-	90	87.705	ENSMFAG00000031523	SMN1	99	80.000	Macaca_fascicularis
ENSOCUG00000025183	-	96	80.282	ENSMMUG00000020214	SMN1	99	80.000	Macaca_mulatta
ENSOCUG00000025183	-	96	75.352	ENSMMUG00000030594	-	99	75.254	Macaca_mulatta
ENSOCUG00000025183	-	96	79.930	ENSMNEG00000035094	-	99	79.787	Macaca_nemestrina
ENSOCUG00000025183	-	83	75.893	ENSMNEG00000036423	-	86	75.893	Macaca_nemestrina
ENSOCUG00000025183	-	99	80.272	ENSMLEG00000041902	-	99	79.932	Mandrillus_leucophaeus
ENSOCUG00000025183	-	92	43.929	ENSMAMG00000011034	smn1	94	42.908	Mastacembelus_armatus
ENSOCUG00000025183	-	92	40.364	ENSMZEG00005013634	smn1	94	43.116	Maylandia_zebra
ENSOCUG00000025183	-	75	56.436	ENSMGAG00000008889	-	95	53.960	Meleagris_gallopavo
ENSOCUG00000025183	-	99	72.355	ENSMAUG00000010262	Smn1	99	73.038	Mesocricetus_auratus
ENSOCUG00000025183	-	94	67.500	ENSMICG00000034708	-	90	75.630	Microcebus_murinus
ENSOCUG00000025183	-	99	72.696	ENSMOCG00000017833	Smn1	99	72.696	Microtus_ochrogaster
ENSOCUG00000025183	-	89	40.809	ENSMMOG00000005504	smn1	93	40.959	Mola_mola
ENSOCUG00000025183	-	100	60.943	ENSMODG00000001436	-	99	60.943	Monodelphis_domestica
ENSOCUG00000025183	-	92	41.455	ENSMALG00000008025	smn1	94	43.165	Monopterus_albus
ENSOCUG00000025183	-	99	72.355	MGP_CAROLIEiJ_G0018836	Smn1	99	73.038	Mus_caroli
ENSOCUG00000025183	-	99	72.355	ENSMUSG00000021645	Smn1	99	73.038	Mus_musculus
ENSOCUG00000025183	-	99	69.625	MGP_PahariEiJ_G0015911	Smn1	99	70.307	Mus_pahari
ENSOCUG00000025183	-	99	71.672	MGP_SPRETEiJ_G0019718	Smn1	99	72.355	Mus_spretus
ENSOCUG00000025183	-	94	79.715	ENSMPUG00000014470	-	98	79.004	Mustela_putorius_furo
ENSOCUG00000025183	-	97	79.931	ENSMLUG00000010603	-	96	79.599	Myotis_lucifugus
ENSOCUG00000025183	-	100	76.271	ENSNGAG00000019833	Smn1	99	76.531	Nannospalax_galili
ENSOCUG00000025183	-	92	42.909	ENSNBRG00000023000	smn1	94	43.321	Neolamprologus_brichardi
ENSOCUG00000025183	-	99	78.983	ENSNLEG00000004454	-	99	78.644	Nomascus_leucogenys
ENSOCUG00000025183	-	85	64.069	ENSMEUG00000011393	-	99	64.655	Notamacropus_eugenii
ENSOCUG00000025183	-	86	79.399	ENSOPRG00000002015	-	91	79.828	Ochotona_princeps
ENSOCUG00000025183	-	94	73.835	ENSODEG00000015976	-	97	73.118	Octodon_degus
ENSOCUG00000025183	-	92	42.599	ENSONIG00000011799	smn1	95	44.170	Oreochromis_niloticus
ENSOCUG00000025183	-	94	55.357	ENSOANG00000001626	-	96	56.786	Ornithorhynchus_anatinus
ENSOCUG00000025183	-	92	39.636	ENSORLG00000010552	smn1	94	40.000	Oryzias_latipes
ENSOCUG00000025183	-	92	41.026	ENSORLG00020007936	smn1	94	40.293	Oryzias_latipes_hni
ENSOCUG00000025183	-	92	40.727	ENSOMEG00000007824	smn1	94	43.273	Oryzias_melastigma
ENSOCUG00000025183	-	90	71.852	ENSOGAG00000031414	-	96	70.758	Otolemur_garnettii
ENSOCUG00000025183	-	91	83.806	ENSOARG00000005425	-	88	82.114	Ovis_aries
ENSOCUG00000025183	-	96	78.521	ENSPPAG00000036640	-	99	78.305	Pan_paniscus
ENSOCUG00000025183	-	100	78.305	ENSPPRG00000005575	-	99	82.877	Panthera_pardus
ENSOCUG00000025183	-	100	78.305	ENSPTIG00000007745	-	99	83.562	Panthera_tigris_altaica
ENSOCUG00000025183	-	96	79.225	ENSPTRG00000016955	-	99	83.448	Pan_troglodytes
ENSOCUG00000025183	-	99	80.339	ENSPANG00000013601	-	99	80.000	Papio_anubis
ENSOCUG00000025183	-	95	74.733	ENSPANG00000000253	-	98	76.027	Papio_anubis
ENSOCUG00000025183	-	74	50.242	ENSPKIG00000011096	smn1	94	43.382	Paramormyrops_kingsleyae
ENSOCUG00000025183	-	90	56.175	ENSPSIG00000014787	-	77	54.582	Pelodiscus_sinensis
ENSOCUG00000025183	-	78	46.789	ENSPMGG00000012285	smn1	67	46.632	Periophthalmus_magnuspinnatus
ENSOCUG00000025183	-	74	40.291	ENSPMAG00000005004	smn1	67	38.424	Petromyzon_marinus
ENSOCUG00000025183	-	99	60.884	ENSPCIG00000025764	-	100	61.356	Phascolarctos_cinereus
ENSOCUG00000025183	-	92	42.254	ENSPFOG00000007786	smn1	94	43.478	Poecilia_formosa
ENSOCUG00000025183	-	92	42.553	ENSPLAG00000012071	smn1	94	43.841	Poecilia_latipinna
ENSOCUG00000025183	-	92	42.254	ENSPMEG00000017085	smn1	94	43.478	Poecilia_mexicana
ENSOCUG00000025183	-	92	44.186	ENSPREG00000005824	smn1	94	42.545	Poecilia_reticulata
ENSOCUG00000025183	-	90	85.306	ENSPPYG00000015533	-	87	84.898	Pongo_abelii
ENSOCUG00000025183	-	85	53.478	ENSPPYG00000019189	-	87	53.478	Pongo_abelii
ENSOCUG00000025183	-	91	77.381	ENSPCAG00000004187	-	91	76.190	Procavia_capensis
ENSOCUG00000025183	-	90	68.571	ENSPCOG00000022307	-	91	71.837	Propithecus_coquereli
ENSOCUG00000025183	-	96	80.282	ENSPVAG00000005977	-	99	78.644	Pteropus_vampyrus
ENSOCUG00000025183	-	92	42.909	ENSPNYG00000014148	smn1	94	43.321	Pundamilia_nyererei
ENSOCUG00000025183	-	75	44.019	ENSPNAG00000014007	smn1	72	43.568	Pygocentrus_nattereri
ENSOCUG00000025183	-	99	71.088	ENSRNOG00000018067	Smn1	99	71.088	Rattus_norvegicus
ENSOCUG00000025183	-	96	80.282	ENSRBIG00000037052	-	99	80.000	Rhinopithecus_bieti
ENSOCUG00000025183	-	96	64.828	ENSRBIG00000036775	-	97	64.828	Rhinopithecus_bieti
ENSOCUG00000025183	-	96	80.282	ENSRROG00000039399	-	99	80.000	Rhinopithecus_roxellana
ENSOCUG00000025183	-	99	64.189	ENSRROG00000031088	-	99	63.851	Rhinopithecus_roxellana
ENSOCUG00000025183	-	82	77.533	ENSSBOG00000020112	-	79	78.855	Saimiri_boliviensis_boliviensis
ENSOCUG00000025183	-	96	75.000	ENSSBOG00000011665	-	99	78.621	Saimiri_boliviensis_boliviensis
ENSOCUG00000025183	-	100	61.279	ENSSHAG00000001499	-	97	61.279	Sarcophilus_harrisii
ENSOCUG00000025183	-	75	45.933	ENSSFOG00015015507	smn1	92	43.636	Scleropages_formosus
ENSOCUG00000025183	-	92	41.754	ENSSMAG00000007922	smn1	94	42.705	Scophthalmus_maximus
ENSOCUG00000025183	-	92	44.211	ENSSDUG00000018533	smn1	94	43.310	Seriola_dumerili
ENSOCUG00000025183	-	92	44.561	ENSSLDG00000021135	smn1	94	43.662	Seriola_lalandi_dorsalis
ENSOCUG00000025183	-	97	52.249	ENSSPUG00000000373	-	97	52.249	Sphenodon_punctatus
ENSOCUG00000025183	-	92	43.617	ENSSPAG00000004345	smn1	94	41.844	Stegastes_partitus
ENSOCUG00000025183	-	96	57.951	ENSSSCG00000029127	-	96	57.586	Sus_scrofa
ENSOCUG00000025183	-	80	58.065	ENSSSCG00000033865	-	90	60.766	Sus_scrofa
ENSOCUG00000025183	-	97	87.405	ENSSSCG00000016970	-	100	85.714	Sus_scrofa
ENSOCUG00000025183	-	93	50.714	ENSTGUG00000001548	-	99	48.772	Taeniopygia_guttata
ENSOCUG00000025183	-	62	74.093	ENSTBEG00000002399	-	93	74.611	Tupaia_belangeri
ENSOCUG00000025183	-	97	74.825	ENSTTRG00000005080	-	99	75.503	Tursiops_truncatus
ENSOCUG00000025183	-	59	74.457	ENSUAMG00000024947	-	70	74.611	Ursus_americanus
ENSOCUG00000025183	-	97	79.720	ENSUMAG00000007842	-	74	78.983	Ursus_maritimus
ENSOCUG00000025183	-	91	65.314	ENSVPAG00000009887	-	100	65.371	Vicugna_pacos
ENSOCUG00000025183	-	96	79.930	ENSVVUG00000006934	-	99	78.912	Vulpes_vulpes
ENSOCUG00000025183	-	97	45.918	ENSXETG00000018189	smn2	96	44.710	Xenopus_tropicalis
ENSOCUG00000025183	-	93	42.657	ENSXMAG00000001521	smn1	95	41.637	Xiphophorus_maculatus