EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000025234 (Gene tree)
Gene ID: 100341587
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 5857 bases
Position: chrGL019153:89013-94869
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000015843	MMR_HSR1	PF01926.23	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000024509	-	864	-	ENSOCUP00000015843	287 (aa)	-	G1TFZ6

Gene Model

Click here to download ENSOCUG00000025234's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu05100	Bacterial invasion of epithelial cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000025234's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000025234	-	99	38.112	ENSOCUG00000001289	SEPT11	55	39.777
ENSOCUG00000025234	-	94	54.779	ENSOCUG00000008343	SEPT12	74	54.779
ENSOCUG00000025234	-	99	44.561	ENSOCUG00000004136	SEPT7	71	44.561
ENSOCUG00000025234	-	93	44.403	ENSOCUG00000015500	SEPT2	72	44.403
ENSOCUG00000025234	-	92	46.617	ENSOCUG00000009757	SEPT4	54	46.617

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000025234	-	100	84.321	ENSG00000184640	SEPT9	75	97.436	Homo_sapiens
ENSOCUG00000025234	-	97	74.460	ENSAPOG00000016227	sept9b	80	74.460	Acanthochromis_polyacanthus
ENSOCUG00000025234	-	100	72.318	ENSAPOG00000019807	sept9a	78	72.318	Acanthochromis_polyacanthus
ENSOCUG00000025234	-	100	84.321	ENSAMEG00000013722	SEPT9	50	84.321	Ailuropoda_melanoleuca
ENSOCUG00000025234	-	100	72.664	ENSACIG00000008111	sept9a	83	72.664	Amphilophus_citrinellus
ENSOCUG00000025234	-	100	72.318	ENSAOCG00000024060	sept9a	52	72.318	Amphiprion_ocellaris
ENSOCUG00000025234	-	100	72.318	ENSAPEG00000009133	sept9a	50	72.318	Amphiprion_percula
ENSOCUG00000025234	-	99	71.380	ENSAPEG00000000507	sept9b	78	75.556	Amphiprion_percula
ENSOCUG00000025234	-	100	83.972	ENSANAG00000034568	SEPT9	78	83.972	Aotus_nancymaae
ENSOCUG00000025234	-	100	70.690	ENSACLG00000006384	sept9b	84	70.690	Astatotilapia_calliptera
ENSOCUG00000025234	-	100	69.257	ENSAMXG00000043013	sept9b	85	69.257	Astyanax_mexicanus
ENSOCUG00000025234	-	100	72.822	ENSAMXG00000034678	sept9a	57	69.072	Astyanax_mexicanus
ENSOCUG00000025234	-	100	84.669	ENSBTAG00000002633	SEPT9	50	84.669	Bos_taurus
ENSOCUG00000025234	-	100	84.669	ENSCJAG00000013203	SEPT9	78	84.669	Callithrix_jacchus
ENSOCUG00000025234	-	100	84.321	ENSCAFG00020006642	SEPT9	50	84.321	Canis_lupus_dingo
ENSOCUG00000025234	-	100	85.017	ENSCHIG00000026942	SEPT9	50	85.017	Capra_hircus
ENSOCUG00000025234	-	100	84.669	ENSTSYG00000030804	SEPT9	84	84.669	Carlito_syrichta
ENSOCUG00000025234	-	100	85.017	ENSCAPG00000000257	SEPT9	84	85.017	Cavia_aperea
ENSOCUG00000025234	-	100	85.017	ENSCPOG00000012711	SEPT9	84	85.017	Cavia_porcellus
ENSOCUG00000025234	-	100	84.321	ENSCCAG00000028621	SEPT9	84	84.321	Cebus_capucinus
ENSOCUG00000025234	-	100	84.669	ENSCATG00000030099	SEPT9	84	84.669	Cercocebus_atys
ENSOCUG00000025234	-	100	84.321	ENSCLAG00000016684	SEPT9	71	98.235	Chinchilla_lanigera
ENSOCUG00000025234	-	100	84.669	ENSCSAG00000005146	SEPT9	50	84.669	Chlorocebus_sabaeus
ENSOCUG00000025234	-	100	84.321	ENSCANG00000040150	SEPT9	84	84.321	Colobus_angolensis_palliatus
ENSOCUG00000025234	-	100	84.321	ENSCGRG00001008836	Sept9	50	84.321	Cricetulus_griseus_chok1gshd
ENSOCUG00000025234	-	100	84.321	ENSCGRG00000014533	Sept9	50	84.321	Cricetulus_griseus_crigri
ENSOCUG00000025234	-	100	73.010	ENSCSEG00000012690	sept9a	82	73.010	Cynoglossus_semilaevis
ENSOCUG00000025234	-	100	67.128	ENSCVAG00000002992	sept9a	82	67.128	Cyprinodon_variegatus
ENSOCUG00000025234	-	100	71.284	ENSDARG00000103900	sept9b	77	84.076	Danio_rerio
ENSOCUG00000025234	-	100	82.927	ENSDORG00000028516	Sept9	84	82.927	Dipodomys_ordii
ENSOCUG00000025234	-	96	65.091	ENSEBUG00000015741	sept9b	82	65.091	Eptatretus_burgeri
ENSOCUG00000025234	-	97	84.116	ENSEASG00005004791	SEPT9	50	84.321	Equus_asinus_asinus
ENSOCUG00000025234	-	97	84.116	ENSECAG00000020246	SEPT9	53	84.321	Equus_caballus
ENSOCUG00000025234	-	100	83.972	ENSFCAG00000009399	SEPT9	84	83.972	Felis_catus
ENSOCUG00000025234	-	100	84.321	ENSFDAG00000012964	SEPT9	84	84.321	Fukomys_damarensis
ENSOCUG00000025234	-	99	74.035	ENSGAFG00000009913	sept9b	71	74.035	Gambusia_affinis
ENSOCUG00000025234	-	100	72.664	ENSGAFG00000019050	sept9a	86	72.664	Gambusia_affinis
ENSOCUG00000025234	-	100	72.318	ENSGACG00000012304	sept9a	81	73.310	Gasterosteus_aculeatus
ENSOCUG00000025234	-	97	74.368	ENSGACG00000019397	sept9b	77	72.281	Gasterosteus_aculeatus
ENSOCUG00000025234	-	84	85.124	ENSGGOG00000012780	SEPT9	75	85.062	Gorilla_gorilla
ENSOCUG00000025234	-	98	70.847	ENSHBUG00000018286	sept9b	79	74.444	Haplochromis_burtoni
ENSOCUG00000025234	-	100	85.714	ENSHGLG00000004239	SEPT9	84	85.714	Heterocephalus_glaber_female
ENSOCUG00000025234	-	100	85.366	ENSHGLG00100017934	SEPT9	84	85.366	Heterocephalus_glaber_male
ENSOCUG00000025234	-	98	74.286	ENSHCOG00000017892	sept9b	82	74.286	Hippocampus_comes
ENSOCUG00000025234	-	100	72.474	ENSIPUG00000000769	sept9	78	72.474	Ictalurus_punctatus
ENSOCUG00000025234	-	96	71.071	ENSIPUG00000022775	Sept9	55	71.071	Ictalurus_punctatus
ENSOCUG00000025234	-	100	83.275	ENSSTOG00000027430	-	50	83.275	Ictidomys_tridecemlineatus
ENSOCUG00000025234	-	100	85.366	ENSJJAG00000015931	Sept9	84	85.366	Jaculus_jaculus
ENSOCUG00000025234	-	100	73.356	ENSKMAG00000020917	sept9a	84	73.356	Kryptolebias_marmoratus
ENSOCUG00000025234	-	94	74.265	ENSKMAG00000013474	sept9b	80	74.265	Kryptolebias_marmoratus
ENSOCUG00000025234	-	100	72.318	ENSLBEG00000024768	sept9a	87	72.318	Labrus_bergylta
ENSOCUG00000025234	-	99	71.777	ENSLBEG00000008643	sept9b	97	71.218	Labrus_bergylta
ENSOCUG00000025234	-	100	84.669	ENSMFAG00000035508	SEPT9	84	84.669	Macaca_fascicularis
ENSOCUG00000025234	-	100	84.669	ENSMMUG00000001321	SEPT9	78	84.669	Macaca_mulatta
ENSOCUG00000025234	-	100	84.669	ENSMNEG00000044427	SEPT9	84	84.669	Macaca_nemestrina
ENSOCUG00000025234	-	100	84.669	ENSMLEG00000030788	SEPT9	84	84.669	Mandrillus_leucophaeus
ENSOCUG00000025234	-	100	72.318	ENSMAMG00000023602	sept9a	78	72.318	Mastacembelus_armatus
ENSOCUG00000025234	-	100	72.125	ENSMGAG00000003889	SEPT9	50	72.125	Meleagris_gallopavo
ENSOCUG00000025234	-	100	85.017	ENSMAUG00000021555	Sept9	84	85.017	Mesocricetus_auratus
ENSOCUG00000025234	-	100	84.669	ENSMICG00000008088	SEPT9	84	84.669	Microcebus_murinus
ENSOCUG00000025234	-	100	85.366	ENSMOCG00000019545	Sept9	84	85.366	Microtus_ochrogaster
ENSOCUG00000025234	-	98	73.310	ENSMMOG00000008773	sept9b	52	73.310	Mola_mola
ENSOCUG00000025234	-	100	71.280	ENSMALG00000005623	sept9a	50	65.979	Monopterus_albus
ENSOCUG00000025234	-	94	74.815	ENSMALG00000020891	sept9b	77	74.815	Monopterus_albus
ENSOCUG00000025234	-	100	84.321	MGP_CAROLIEiJ_G0017463	Sept9	70	98.235	Mus_caroli
ENSOCUG00000025234	-	100	84.669	ENSMUSG00000059248	Sept9	84	84.669	Mus_musculus
ENSOCUG00000025234	-	100	84.669	MGP_PahariEiJ_G0018591	Sept9	50	84.669	Mus_pahari
ENSOCUG00000025234	-	100	84.669	MGP_SPRETEiJ_G0018307	Sept9	70	98.235	Mus_spretus
ENSOCUG00000025234	-	100	84.669	ENSNGAG00000003716	Sept9	84	84.669	Nannospalax_galili
ENSOCUG00000025234	-	100	65.517	ENSNBRG00000000573	sept9b	83	65.517	Neolamprologus_brichardi
ENSOCUG00000025234	-	100	72.664	ENSNBRG00000005310	sept9a	86	72.664	Neolamprologus_brichardi
ENSOCUG00000025234	-	84	85.124	ENSNLEG00000000042	-	75	85.062	Nomascus_leucogenys
ENSOCUG00000025234	-	100	85.366	ENSODEG00000012340	SEPT9	84	85.366	Octodon_degus
ENSOCUG00000025234	-	98	82.042	ENSOANG00000001759	SEPT9	82	82.042	Ornithorhynchus_anatinus
ENSOCUG00000025234	-	100	73.702	ENSORLG00020016670	sept9a	83	73.702	Oryzias_latipes_hni
ENSOCUG00000025234	-	99	71.380	ENSORLG00020010851	sept9b	81	71.380	Oryzias_latipes_hni
ENSOCUG00000025234	-	99	71.380	ENSORLG00015009324	sept9b	83	71.380	Oryzias_latipes_hsok
ENSOCUG00000025234	-	100	73.356	ENSORLG00015006128	sept9a	87	73.356	Oryzias_latipes_hsok
ENSOCUG00000025234	-	100	72.318	ENSOMEG00000014214	sept9a	52	72.318	Oryzias_melastigma
ENSOCUG00000025234	-	100	83.624	ENSOGAG00000003740	SEPT9	50	83.624	Otolemur_garnettii
ENSOCUG00000025234	-	100	84.321	ENSPPAG00000034953	SEPT9	84	84.321	Pan_paniscus
ENSOCUG00000025234	-	100	84.321	ENSPTRG00000045094	SEPT9	84	84.321	Pan_troglodytes
ENSOCUG00000025234	-	100	84.669	ENSPANG00000019992	SEPT9	78	84.669	Papio_anubis
ENSOCUG00000025234	-	100	69.686	ENSPKIG00000023386	sept9a	84	69.686	Paramormyrops_kingsleyae
ENSOCUG00000025234	-	100	71.429	ENSPKIG00000005519	SEPT9	86	71.429	Paramormyrops_kingsleyae
ENSOCUG00000025234	-	99	59.091	ENSPMGG00000023228	-	77	59.091	Periophthalmus_magnuspinnatus
ENSOCUG00000025234	-	100	71.972	ENSPMGG00000018163	sept9a	85	71.972	Periophthalmus_magnuspinnatus
ENSOCUG00000025234	-	100	85.017	ENSPEMG00000016176	Sept9	84	85.017	Peromyscus_maniculatus_bairdii
ENSOCUG00000025234	-	93	65.672	ENSPMAG00000001421	SEPT9	79	65.672	Petromyzon_marinus
ENSOCUG00000025234	-	98	62.500	ENSPMAG00000003110	SEPT9	97	62.500	Petromyzon_marinus
ENSOCUG00000025234	-	97	75.180	ENSPLAG00000013644	-	80	75.180	Poecilia_latipinna
ENSOCUG00000025234	-	99	71.141	ENSPMEG00000018236	-	82	74.818	Poecilia_mexicana
ENSOCUG00000025234	-	100	68.166	ENSPREG00000001687	sept9a	95	69.091	Poecilia_reticulata
ENSOCUG00000025234	-	97	75.180	ENSPREG00000016106	sept9b	93	71.218	Poecilia_reticulata
ENSOCUG00000025234	-	100	84.669	ENSPCOG00000021922	SEPT9	78	84.669	Propithecus_coquereli
ENSOCUG00000025234	-	100	72.822	ENSPNAG00000001524	sept9a	82	72.822	Pygocentrus_nattereri
ENSOCUG00000025234	-	77	71.875	ENSPNAG00000016498	sept9b	68	70.870	Pygocentrus_nattereri
ENSOCUG00000025234	-	100	74.653	ENSRNOG00000002807	Sept9	50	74.653	Rattus_norvegicus
ENSOCUG00000025234	-	100	84.669	ENSRBIG00000027280	SEPT9	84	84.669	Rhinopithecus_bieti
ENSOCUG00000025234	-	100	84.669	ENSRROG00000041006	SEPT9	84	84.669	Rhinopithecus_roxellana
ENSOCUG00000025234	-	100	84.321	ENSSBOG00000025548	-	84	84.321	Saimiri_boliviensis_boliviensis
ENSOCUG00000025234	-	100	71.777	ENSSFOG00015004877	-	53	71.777	Scleropages_formosus
ENSOCUG00000025234	-	100	72.474	ENSSFOG00015006639	sept9a	50	72.474	Scleropages_formosus
ENSOCUG00000025234	-	94	74.074	ENSSMAG00000012833	sept9a	85	67.698	Scophthalmus_maximus
ENSOCUG00000025234	-	99	71.672	ENSSMAG00000015231	sept9b	50	71.672	Scophthalmus_maximus
ENSOCUG00000025234	-	100	72.318	ENSSDUG00000002476	sept9a	52	72.222	Seriola_dumerili
ENSOCUG00000025234	-	100	72.318	ENSSLDG00000025609	sept9a	86	72.318	Seriola_lalandi_dorsalis
ENSOCUG00000025234	-	97	73.665	ENSSLDG00000002092	sept9b	82	73.665	Seriola_lalandi_dorsalis
ENSOCUG00000025234	-	100	85.366	ENSSSCG00000017168	SEPT9	76	85.366	Sus_scrofa
ENSOCUG00000025234	-	98	70.847	ENSTRUG00000012787	sept9b	80	65.328	Takifugu_rubripes
ENSOCUG00000025234	-	100	71.626	ENSTNIG00000003858	sept9a	51	71.626	Tetraodon_nigroviridis
ENSOCUG00000025234	-	100	85.017	ENSUAMG00000013728	SEPT9	92	85.017	Ursus_americanus
ENSOCUG00000025234	-	100	84.321	ENSVVUG00000015245	SEPT9	50	84.321	Vulpes_vulpes
ENSOCUG00000025234	-	100	77.352	ENSXETG00000012261	sept9	51	77.352	Xenopus_tropicalis
ENSOCUG00000025234	-	99	71.141	ENSXMAG00000028828	sept9b	81	71.141	Xiphophorus_maculatus