EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000025366 (Gene tree)
Gene ID: 100353289
Gene Symbol: CMSS1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 94827 bases
Position: chr14:120484802-120579628
Accession: 100353289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000022932	CMS1	PF14617.6	5.6e-32	1	1
ENSOCUP00000022932	DEAD	PF00270.29	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000024264	CMSS1-201	1248	XM_008267047	ENSOCUP00000022932	276 (aa)	XP_008265273	G1U0Q1

Gene Model

Click here to download ENSOCUG00000025366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000025366's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000025366	CMSS1	95	89.655	ENSG00000184220	CMSS1	99	92.593	Homo_sapiens
ENSOCUG00000025366	CMSS1	73	64.356	ENSAPOG00000010604	cmss1	93	60.000	Acanthochromis_polyacanthus
ENSOCUG00000025366	CMSS1	93	90.347	ENSAMEG00000004092	CMSS1	100	90.347	Ailuropoda_melanoleuca
ENSOCUG00000025366	CMSS1	73	53.960	ENSACIG00000021854	cmss1	91	50.413	Amphilophus_citrinellus
ENSOCUG00000025366	CMSS1	73	63.366	ENSAOCG00000013361	cmss1	70	63.366	Amphiprion_ocellaris
ENSOCUG00000025366	CMSS1	73	63.366	ENSAPEG00000005829	cmss1	70	63.366	Amphiprion_percula
ENSOCUG00000025366	CMSS1	82	61.404	ENSATEG00000008209	cmss1	83	60.581	Anabas_testudineus
ENSOCUG00000025366	CMSS1	83	69.565	ENSAPLG00000010542	CMSS1	100	69.565	Anas_platyrhynchos
ENSOCUG00000025366	CMSS1	93	64.015	ENSACAG00000011065	CMSS1	97	63.258	Anolis_carolinensis
ENSOCUG00000025366	CMSS1	95	90.076	ENSANAG00000023565	CMSS1	100	90.076	Aotus_nancymaae
ENSOCUG00000025366	CMSS1	73	61.386	ENSACLG00000027294	cmss1	83	55.785	Astatotilapia_calliptera
ENSOCUG00000025366	CMSS1	72	55.500	ENSAMXG00000002046	cmss1	82	52.675	Astyanax_mexicanus
ENSOCUG00000025366	CMSS1	100	89.130	ENSBTAG00000013663	CMSS1	100	89.130	Bos_taurus
ENSOCUG00000025366	CMSS1	95	89.695	ENSCJAG00000000610	CMSS1	100	89.695	Callithrix_jacchus
ENSOCUG00000025366	CMSS1	100	90.942	ENSCAFG00000009230	CMSS1	100	90.942	Canis_familiaris
ENSOCUG00000025366	CMSS1	94	91.154	ENSCAFG00020009464	-	95	91.154	Canis_lupus_dingo
ENSOCUG00000025366	CMSS1	84	84.052	ENSCAFG00020024156	-	76	80.408	Canis_lupus_dingo
ENSOCUG00000025366	CMSS1	100	88.406	ENSCHIG00000013003	CMSS1	100	88.406	Capra_hircus
ENSOCUG00000025366	CMSS1	100	88.406	ENSTSYG00000009266	CMSS1	100	88.406	Carlito_syrichta
ENSOCUG00000025366	CMSS1	81	71.053	ENSCAPG00000013584	CMSS1	100	70.175	Cavia_aperea
ENSOCUG00000025366	CMSS1	99	83.456	ENSCPOG00000014680	CMSS1	96	83.456	Cavia_porcellus
ENSOCUG00000025366	CMSS1	95	90.840	ENSCCAG00000034685	CMSS1	100	90.840	Cebus_capucinus
ENSOCUG00000025366	CMSS1	95	90.805	ENSCATG00000031980	CMSS1	100	90.805	Cercocebus_atys
ENSOCUG00000025366	CMSS1	83	90.830	ENSCLAG00000011241	CMSS1	98	90.830	Chinchilla_lanigera
ENSOCUG00000025366	CMSS1	89	91.429	ENSCSAG00000006024	CMSS1	100	91.429	Chlorocebus_sabaeus
ENSOCUG00000025366	CMSS1	94	70.656	ENSCHOG00000012098	CMSS1	94	70.656	Choloepus_hoffmanni
ENSOCUG00000025366	CMSS1	71	40.000	ENSCING00000014848	-	100	41.176	Ciona_intestinalis
ENSOCUG00000025366	CMSS1	94	90.734	ENSCANG00000031337	CMSS1	99	90.734	Colobus_angolensis_palliatus
ENSOCUG00000025366	CMSS1	93	83.333	ENSCGRG00001014305	Cmss1	93	83.333	Cricetulus_griseus_chok1gshd
ENSOCUG00000025366	CMSS1	93	83.984	ENSCGRG00000006722	Cmss1	99	83.984	Cricetulus_griseus_crigri
ENSOCUG00000025366	CMSS1	73	61.881	ENSCSEG00000004958	cmss1	69	61.881	Cynoglossus_semilaevis
ENSOCUG00000025366	CMSS1	73	61.386	ENSCVAG00000005039	cmss1	95	52.727	Cyprinodon_variegatus
ENSOCUG00000025366	CMSS1	82	52.381	ENSDARG00000112579	cmss1	84	51.220	Danio_rerio
ENSOCUG00000025366	CMSS1	96	85.338	ENSDNOG00000040418	CMSS1	95	85.338	Dasypus_novemcinctus
ENSOCUG00000025366	CMSS1	93	87.984	ENSDORG00000010461	Cmss1	92	87.984	Dipodomys_ordii
ENSOCUG00000025366	CMSS1	99	79.927	ENSEASG00005010966	CMSS1	99	91.324	Equus_asinus_asinus
ENSOCUG00000025366	CMSS1	94	88.417	ENSECAG00000015662	CMSS1	99	89.381	Equus_caballus
ENSOCUG00000025366	CMSS1	83	63.596	ENSEEUG00000007624	-	82	63.596	Erinaceus_europaeus
ENSOCUG00000025366	CMSS1	87	57.261	ENSELUG00000019459	cmss1	80	57.261	Esox_lucius
ENSOCUG00000025366	CMSS1	93	94.186	ENSFCAG00000044577	CMSS1	92	94.186	Felis_catus
ENSOCUG00000025366	CMSS1	87	63.598	ENSFALG00000005816	CMSS1	100	63.598	Ficedula_albicollis
ENSOCUG00000025366	CMSS1	83	89.035	ENSFDAG00000012577	CMSS1	100	89.035	Fukomys_damarensis
ENSOCUG00000025366	CMSS1	82	61.039	ENSFHEG00000012008	cmss1	95	61.039	Fundulus_heteroclitus
ENSOCUG00000025366	CMSS1	73	61.881	ENSGMOG00000016729	cmss1	72	61.881	Gadus_morhua
ENSOCUG00000025366	CMSS1	94	64.122	ENSGALG00000015267	CMSS1	100	64.368	Gallus_gallus
ENSOCUG00000025366	CMSS1	75	63.285	ENSGAFG00000021217	cmss1	77	63.366	Gambusia_affinis
ENSOCUG00000025366	CMSS1	73	58.416	ENSGACG00000002798	cmss1	72	58.416	Gasterosteus_aculeatus
ENSOCUG00000025366	CMSS1	86	71.730	ENSGAGG00000019861	CMSS1	92	71.730	Gopherus_agassizii
ENSOCUG00000025366	CMSS1	95	90.805	ENSGGOG00000014125	CMSS1	100	90.805	Gorilla_gorilla
ENSOCUG00000025366	CMSS1	73	61.386	ENSHBUG00000008431	cmss1	71	61.386	Haplochromis_burtoni
ENSOCUG00000025366	CMSS1	92	84.585	ENSHGLG00000019481	CMSS1	100	84.585	Heterocephalus_glaber_female
ENSOCUG00000025366	CMSS1	93	84.436	ENSHGLG00100010314	CMSS1	100	84.436	Heterocephalus_glaber_male
ENSOCUG00000025366	CMSS1	79	62.557	ENSHCOG00000003222	cmss1	68	64.356	Hippocampus_comes
ENSOCUG00000025366	CMSS1	80	56.306	ENSIPUG00000011591	cmss1	77	56.306	Ictalurus_punctatus
ENSOCUG00000025366	CMSS1	93	89.147	ENSSTOG00000019366	CMSS1	92	89.147	Ictidomys_tridecemlineatus
ENSOCUG00000025366	CMSS1	93	84.436	ENSJJAG00000014894	Cmss1	90	90.099	Jaculus_jaculus
ENSOCUG00000025366	CMSS1	73	53.960	ENSKMAG00000002390	cmss1	81	53.960	Kryptolebias_marmoratus
ENSOCUG00000025366	CMSS1	80	53.750	ENSLBEG00000006298	cmss1	83	59.606	Labrus_bergylta
ENSOCUG00000025366	CMSS1	83	64.783	ENSLACG00000009293	CMSS1	100	64.783	Latimeria_chalumnae
ENSOCUG00000025366	CMSS1	82	56.828	ENSLOCG00000009391	cmss1	86	55.102	Lepisosteus_oculatus
ENSOCUG00000025366	CMSS1	83	89.912	ENSLAFG00000017509	CMSS1	100	89.912	Loxodonta_africana
ENSOCUG00000025366	CMSS1	95	91.188	ENSMFAG00000045006	CMSS1	100	91.188	Macaca_fascicularis
ENSOCUG00000025366	CMSS1	95	90.805	ENSMMUG00000002939	CMSS1	100	90.805	Macaca_mulatta
ENSOCUG00000025366	CMSS1	95	90.805	ENSMNEG00000031315	CMSS1	100	90.805	Macaca_nemestrina
ENSOCUG00000025366	CMSS1	95	90.805	ENSMLEG00000033660	CMSS1	100	90.805	Mandrillus_leucophaeus
ENSOCUG00000025366	CMSS1	73	63.366	ENSMAMG00000017176	cmss1	81	59.746	Mastacembelus_armatus
ENSOCUG00000025366	CMSS1	73	61.386	ENSMZEG00005021886	cmss1	83	55.785	Maylandia_zebra
ENSOCUG00000025366	CMSS1	83	68.421	ENSMGAG00000014360	CMSS1	100	68.421	Meleagris_gallopavo
ENSOCUG00000025366	CMSS1	98	59.779	ENSMAUG00000020609	Cmss1	95	59.779	Mesocricetus_auratus
ENSOCUG00000025366	CMSS1	93	91.085	ENSMICG00000048977	CMSS1	99	91.085	Microcebus_murinus
ENSOCUG00000025366	CMSS1	98	80.741	ENSMOCG00000021937	Cmss1	96	80.741	Microtus_ochrogaster
ENSOCUG00000025366	CMSS1	73	61.881	ENSMMOG00000019794	cmss1	84	61.881	Mola_mola
ENSOCUG00000025366	CMSS1	92	75.197	ENSMODG00000002275	CMSS1	95	75.197	Monodelphis_domestica
ENSOCUG00000025366	CMSS1	87	58.607	ENSMALG00000004250	cmss1	84	57.787	Monopterus_albus
ENSOCUG00000025366	CMSS1	98	79.336	MGP_CAROLIEiJ_G0020824	Cmss1	96	79.630	Mus_caroli
ENSOCUG00000025366	CMSS1	98	80.443	ENSMUSG00000022748	Cmss1	96	80.443	Mus_musculus
ENSOCUG00000025366	CMSS1	93	81.467	MGP_PahariEiJ_G0016524	Cmss1	93	81.467	Mus_pahari
ENSOCUG00000025366	CMSS1	98	80.074	MGP_SPRETEiJ_G0021724	Cmss1	96	80.074	Mus_spretus
ENSOCUG00000025366	CMSS1	94	93.077	ENSMPUG00000011324	CMSS1	100	93.077	Mustela_putorius_furo
ENSOCUG00000025366	CMSS1	94	91.571	ENSMLUG00000001131	CMSS1	99	91.571	Myotis_lucifugus
ENSOCUG00000025366	CMSS1	94	86.100	ENSNGAG00000020316	Cmss1	93	86.100	Nannospalax_galili
ENSOCUG00000025366	CMSS1	73	60.891	ENSNBRG00000003095	cmss1	83	55.785	Neolamprologus_brichardi
ENSOCUG00000025366	CMSS1	95	91.954	ENSNLEG00000034172	CMSS1	100	91.954	Nomascus_leucogenys
ENSOCUG00000025366	CMSS1	83	66.667	ENSMEUG00000014505	CMSS1	100	66.667	Notamacropus_eugenii
ENSOCUG00000025366	CMSS1	93	94.942	ENSOPRG00000002986	CMSS1	92	94.942	Ochotona_princeps
ENSOCUG00000025366	CMSS1	93	85.659	ENSODEG00000005226	-	92	85.659	Octodon_degus
ENSOCUG00000025366	CMSS1	94	74.131	ENSODEG00000001853	-	93	74.131	Octodon_degus
ENSOCUG00000025366	CMSS1	79	78.440	ENSODEG00000009446	-	85	78.440	Octodon_degus
ENSOCUG00000025366	CMSS1	98	77.778	ENSODEG00000003558	-	96	77.778	Octodon_degus
ENSOCUG00000025366	CMSS1	73	60.396	ENSONIG00000006678	cmss1	93	54.959	Oreochromis_niloticus
ENSOCUG00000025366	CMSS1	93	71.154	ENSOANG00000007529	CMSS1	100	73.820	Ornithorhynchus_anatinus
ENSOCUG00000025366	CMSS1	85	60.169	ENSORLG00000020340	cmss1	83	60.169	Oryzias_latipes
ENSOCUG00000025366	CMSS1	76	56.872	ENSORLG00020012235	cmss1	85	57.426	Oryzias_latipes_hni
ENSOCUG00000025366	CMSS1	73	57.426	ENSORLG00015015551	cmss1	75	57.426	Oryzias_latipes_hsok
ENSOCUG00000025366	CMSS1	73	64.356	ENSOMEG00000012555	cmss1	81	60.684	Oryzias_melastigma
ENSOCUG00000025366	CMSS1	83	90.789	ENSOGAG00000002045	CMSS1	100	90.789	Otolemur_garnettii
ENSOCUG00000025366	CMSS1	94	88.889	ENSOARG00000017899	CMSS1	90	88.889	Ovis_aries
ENSOCUG00000025366	CMSS1	95	90.805	ENSPPAG00000038515	CMSS1	96	91.154	Pan_paniscus
ENSOCUG00000025366	CMSS1	93	93.798	ENSPPRG00000016767	CMSS1	92	93.798	Panthera_pardus
ENSOCUG00000025366	CMSS1	93	93.411	ENSPTIG00000018274	CMSS1	92	93.411	Panthera_tigris_altaica
ENSOCUG00000025366	CMSS1	95	90.038	ENSPTRG00000015157	CMSS1	100	91.020	Pan_troglodytes
ENSOCUG00000025366	CMSS1	95	87.739	ENSPANG00000019980	CMSS1	99	88.760	Papio_anubis
ENSOCUG00000025366	CMSS1	82	61.304	ENSPKIG00000012609	cmss1	95	57.588	Paramormyrops_kingsleyae
ENSOCUG00000025366	CMSS1	83	73.362	ENSPSIG00000003849	CMSS1	100	73.362	Pelodiscus_sinensis
ENSOCUG00000025366	CMSS1	73	60.591	ENSPMGG00000010286	cmss1	87	60.591	Periophthalmus_magnuspinnatus
ENSOCUG00000025366	CMSS1	96	81.955	ENSPEMG00000016384	Cmss1	95	81.955	Peromyscus_maniculatus_bairdii
ENSOCUG00000025366	CMSS1	74	54.412	ENSPMAG00000001146	cmss1	99	54.950	Petromyzon_marinus
ENSOCUG00000025366	CMSS1	97	71.739	ENSPCIG00000015656	CMSS1	98	74.231	Phascolarctos_cinereus
ENSOCUG00000025366	CMSS1	73	62.871	ENSPFOG00000016849	cmss1	87	57.028	Poecilia_formosa
ENSOCUG00000025366	CMSS1	73	62.376	ENSPLAG00000008323	cmss1	87	56.627	Poecilia_latipinna
ENSOCUG00000025366	CMSS1	73	62.871	ENSPMEG00000021020	cmss1	86	57.028	Poecilia_mexicana
ENSOCUG00000025366	CMSS1	85	59.167	ENSPREG00000007618	cmss1	84	56.627	Poecilia_reticulata
ENSOCUG00000025366	CMSS1	93	91.085	ENSPPYG00000013606	CMSS1	95	91.085	Pongo_abelii
ENSOCUG00000025366	CMSS1	93	91.473	ENSPCOG00000020035	CMSS1	99	91.473	Propithecus_coquereli
ENSOCUG00000025366	CMSS1	94	80.695	ENSPVAG00000017031	CMSS1	93	80.695	Pteropus_vampyrus
ENSOCUG00000025366	CMSS1	64	63.068	ENSPNYG00000013428	cmss1	79	56.481	Pundamilia_nyererei
ENSOCUG00000025366	CMSS1	87	54.321	ENSPNAG00000007912	cmss1	82	54.321	Pygocentrus_nattereri
ENSOCUG00000025366	CMSS1	94	82.308	ENSRNOG00000027888	Cmss1	100	82.308	Rattus_norvegicus
ENSOCUG00000025366	CMSS1	95	89.272	ENSRBIG00000037931	CMSS1	100	89.272	Rhinopithecus_bieti
ENSOCUG00000025366	CMSS1	95	89.272	ENSRROG00000042910	CMSS1	100	89.272	Rhinopithecus_roxellana
ENSOCUG00000025366	CMSS1	94	90.769	ENSSBOG00000030980	CMSS1	99	90.769	Saimiri_boliviensis_boliviensis
ENSOCUG00000025366	CMSS1	90	75.000	ENSSHAG00000009321	CMSS1	99	75.000	Sarcophilus_harrisii
ENSOCUG00000025366	CMSS1	82	60.870	ENSSFOG00015001509	cmss1	95	54.182	Scleropages_formosus
ENSOCUG00000025366	CMSS1	73	63.861	ENSSMAG00000001653	cmss1	69	63.861	Scophthalmus_maximus
ENSOCUG00000025366	CMSS1	82	60.699	ENSSDUG00000007719	cmss1	90	57.471	Seriola_dumerili
ENSOCUG00000025366	CMSS1	75	63.768	ENSSLDG00000012300	cmss1	88	55.660	Seriola_lalandi_dorsalis
ENSOCUG00000025366	CMSS1	99	73.091	ENSSARG00000003584	CMSS1	97	73.091	Sorex_araneus
ENSOCUG00000025366	CMSS1	82	69.912	ENSSPUG00000003865	CMSS1	100	69.912	Sphenodon_punctatus
ENSOCUG00000025366	CMSS1	75	64.078	ENSSPAG00000019182	cmss1	63	64.356	Stegastes_partitus
ENSOCUG00000025366	CMSS1	93	93.411	ENSSSCG00000011970	CMSS1	92	93.411	Sus_scrofa
ENSOCUG00000025366	CMSS1	83	65.066	ENSTGUG00000013635	CMSS1	100	65.066	Taeniopygia_guttata
ENSOCUG00000025366	CMSS1	73	61.386	ENSTRUG00000015265	cmss1	72	61.386	Takifugu_rubripes
ENSOCUG00000025366	CMSS1	73	54.950	ENSTNIG00000002880	cmss1	73	54.950	Tetraodon_nigroviridis
ENSOCUG00000025366	CMSS1	83	67.982	ENSTBEG00000016722	CMSS1	81	67.982	Tupaia_belangeri
ENSOCUG00000025366	CMSS1	99	85.294	ENSTTRG00000001562	CMSS1	96	85.294	Tursiops_truncatus
ENSOCUG00000025366	CMSS1	99	87.636	ENSUAMG00000024209	CMSS1	100	93.722	Ursus_americanus
ENSOCUG00000025366	CMSS1	100	89.130	ENSUMAG00000001983	CMSS1	99	90.698	Ursus_maritimus
ENSOCUG00000025366	CMSS1	83	74.123	ENSVPAG00000000263	CMSS1	82	74.123	Vicugna_pacos
ENSOCUG00000025366	CMSS1	89	91.870	ENSVVUG00000021647	-	100	91.870	Vulpes_vulpes
ENSOCUG00000025366	CMSS1	79	92.166	ENSVVUG00000007776	-	85	92.166	Vulpes_vulpes
ENSOCUG00000025366	CMSS1	84	60.000	ENSXETG00000011858	cmss1	72	64.356	Xenopus_tropicalis
ENSOCUG00000025366	CMSS1	75	62.500	ENSXCOG00000018724	cmss1	69	62.871	Xiphophorus_couchianus
ENSOCUG00000025366	CMSS1	75	62.500	ENSXMAG00000011243	cmss1	76	62.871	Xiphophorus_maculatus