EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000016992	MMR_HSR1	PF01926.23	8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000031283	RAB3D-201	1808	-	ENSOCUP00000016992	219 (aa)	-	G1TJ67

Gene Model

Pathways

Pathway ID	Pathway Name	Source
ocu04972	Pancreatic secretion	KEGG

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000025381	RAB3D	92	34.450	ENSOCUG00000013654	RAB14	97	34.450
ENSOCUG00000025381	RAB3D	61	31.159	ENSOCUG00000011260	DNAJC27	51	31.159
ENSOCUG00000025381	RAB3D	90	35.025	ENSOCUG00000009428	RAB6B	94	35.025
ENSOCUG00000025381	RAB3D	61	39.706	ENSOCUG00000002932	RAB33A	59	39.706
ENSOCUG00000025381	RAB3D	61	44.853	ENSOCUG00000004254	RAB39B	64	44.853
ENSOCUG00000025381	RAB3D	84	39.474	ENSOCUG00000014755	RAB11A	88	39.474
ENSOCUG00000025381	RAB3D	92	35.323	ENSOCUG00000007580	RAB30	97	35.323
ENSOCUG00000025381	RAB3D	62	30.769	ENSOCUG00000008121	RASL11A	59	30.769
ENSOCUG00000025381	RAB3D	89	34.010	ENSOCUG00000013895	RAB5B	85	34.010
ENSOCUG00000025381	RAB3D	63	52.899	ENSOCUG00000006286	-	78	52.899
ENSOCUG00000025381	RAB3D	56	35.433	ENSOCUG00000001645	RAB7A	61	35.433
ENSOCUG00000025381	RAB3D	90	35.500	ENSOCUG00000009297	RAB6A	94	35.500
ENSOCUG00000025381	RAB3D	92	43.069	ENSOCUG00000017003	RAB1A	96	43.069
ENSOCUG00000025381	RAB3D	94	36.493	ENSOCUG00000005634	RAB25	97	36.493
ENSOCUG00000025381	RAB3D	60	45.802	ENSOCUG00000028208	RAB11B	52	45.802
ENSOCUG00000025381	RAB3D	60	33.083	ENSOCUG00000022455	-	69	33.083
ENSOCUG00000025381	RAB3D	84	34.239	ENSOCUG00000008604	RAB31	90	34.239
ENSOCUG00000025381	RAB3D	91	38.000	ENSOCUG00000000331	RAB2B	93	38.000
ENSOCUG00000025381	RAB3D	61	33.099	ENSOCUG00000000650	RERG	67	33.099
ENSOCUG00000025381	RAB3D	97	34.434	ENSOCUG00000012200	RAB5A	95	34.434
ENSOCUG00000025381	RAB3D	88	39.303	ENSOCUG00000022307	RAB18	97	39.303
ENSOCUG00000025381	RAB3D	60	31.579	ENSOCUG00000012106	KRAS	62	30.921
ENSOCUG00000025381	RAB3D	80	32.386	ENSOCUG00000004816	RAB23	74	32.386

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000025381	RAB3D	100	75.909	ENSACAG00000016810	RAB3D	96	75.909	Anolis_carolinensis
ENSOCUG00000025381	RAB3D	72	83.125	ENSDARG00000018107	rab3da	95	83.125	Danio_rerio
ENSOCUG00000025381	RAB3D	100	69.406	ENSHCOG00000017123	-	100	69.406	Hippocampus_comes
ENSOCUG00000025381	RAB3D	100	69.231	ENSKMAG00000018973	-	100	69.231	Kryptolebias_marmoratus
ENSOCUG00000025381	RAB3D	89	68.205	ENSORLG00000016555	rab3db	100	64.091	Oryzias_latipes
ENSOCUG00000025381	RAB3D	82	71.667	ENSORLG00020021663	rab3db	94	65.238	Oryzias_latipes_hni
ENSOCUG00000025381	RAB3D	82	71.111	ENSORLG00015014594	rab3db	94	64.762	Oryzias_latipes_hsok
ENSOCUG00000025381	RAB3D	95	76.442	ENSPKIG00000009021	rab3db	94	76.442	Paramormyrops_kingsleyae
ENSOCUG00000025381	RAB3D	100	76.712	ENSPCIG00000017722	RAB3D	100	76.712	Phascolarctos_cinereus
ENSOCUG00000025381	RAB3D	100	78.539	ENSSHAG00000007153	RAB3D	96	78.539	Sarcophilus_harrisii