EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000025587 (Gene tree)
Gene ID: 100346767
Gene Symbol: -
Alias: -
Full Name: nuclear nucleic acid-binding protein C1D
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 426 bases
Position: chr1:1683371-1683796
Accession: 100346767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000019901	Sas10_Utp3	PF04000.15	7.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000026517	-	426	XM_002708036	ENSOCUP00000019901	141 (aa)	XP_002708082	G1TS88

Gene Model

Click here to download ENSOCUG00000025587's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000025587's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000025587	-	100	100.000	ENSOCUG00000009771	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000025587	-	99	95.714	ENSG00000197223	C1D	99	95.714	Homo_sapiens
ENSOCUG00000025587	-	99	61.806	ENSAPOG00000005466	c1d	97	61.806	Acanthochromis_polyacanthus
ENSOCUG00000025587	-	98	96.377	ENSAMEG00000004859	C1D	95	96.377	Ailuropoda_melanoleuca
ENSOCUG00000025587	-	94	64.394	ENSACIG00000012684	c1d	86	64.394	Amphilophus_citrinellus
ENSOCUG00000025587	-	93	64.394	ENSAOCG00000020354	c1d	86	64.394	Amphiprion_ocellaris
ENSOCUG00000025587	-	94	64.662	ENSAPEG00000001403	c1d	86	64.662	Amphiprion_percula
ENSOCUG00000025587	-	96	65.693	ENSATEG00000012922	c1d	88	65.693	Anabas_testudineus
ENSOCUG00000025587	-	97	77.143	ENSAPLG00000009320	C1D	97	77.143	Anas_platyrhynchos
ENSOCUG00000025587	-	87	83.607	ENSACAG00000001337	C1D	100	83.607	Anolis_carolinensis
ENSOCUG00000025587	-	99	92.143	ENSANAG00000005773	-	99	92.143	Aotus_nancymaae
ENSOCUG00000025587	-	99	95.714	ENSANAG00000035972	-	99	95.714	Aotus_nancymaae
ENSOCUG00000025587	-	87	65.574	ENSACLG00000026206	c1d	89	62.687	Astatotilapia_calliptera
ENSOCUG00000025587	-	100	61.702	ENSAMXG00000043212	c1d	94	61.702	Astyanax_mexicanus
ENSOCUG00000025587	-	100	94.326	ENSBTAG00000049002	C1D	100	94.326	Bos_taurus
ENSOCUG00000025587	-	83	87.179	ENSCJAG00000044668	-	91	87.179	Callithrix_jacchus
ENSOCUG00000025587	-	99	96.429	ENSCJAG00000006589	C1D	92	95.714	Callithrix_jacchus
ENSOCUG00000025587	-	100	92.908	ENSCAFG00000030099	C1D	100	92.908	Canis_familiaris
ENSOCUG00000025587	-	100	92.908	ENSCAFG00020026997	C1D	100	92.908	Canis_lupus_dingo
ENSOCUG00000025587	-	100	93.617	ENSCHIG00000025729	C1D	100	93.617	Capra_hircus
ENSOCUG00000025587	-	99	84.286	ENSTSYG00000026573	-	85	84.286	Carlito_syrichta
ENSOCUG00000025587	-	100	94.326	ENSTSYG00000035739	-	100	94.326	Carlito_syrichta
ENSOCUG00000025587	-	80	82.301	ENSCAPG00000011523	-	94	82.301	Cavia_aperea
ENSOCUG00000025587	-	85	80.000	ENSCPOG00000020112	-	100	80.000	Cavia_porcellus
ENSOCUG00000025587	-	99	90.714	ENSCPOG00000037986	-	99	90.714	Cavia_porcellus
ENSOCUG00000025587	-	99	96.429	ENSCCAG00000030405	-	99	96.429	Cebus_capucinus
ENSOCUG00000025587	-	99	95.714	ENSCATG00000045336	C1D	99	95.714	Cercocebus_atys
ENSOCUG00000025587	-	99	93.571	ENSCATG00000043348	-	99	93.571	Cercocebus_atys
ENSOCUG00000025587	-	100	91.489	ENSCLAG00000011883	C1D	100	91.489	Chinchilla_lanigera
ENSOCUG00000025587	-	99	95.714	ENSCSAG00000014811	C1D	99	95.714	Chlorocebus_sabaeus
ENSOCUG00000025587	-	100	95.745	ENSCHOG00000006719	C1D	79	95.745	Choloepus_hoffmanni
ENSOCUG00000025587	-	94	79.699	ENSCPBG00000014451	C1D	90	79.699	Chrysemys_picta_bellii
ENSOCUG00000025587	-	86	43.802	ENSCING00000020906	-	64	43.443	Ciona_intestinalis
ENSOCUG00000025587	-	83	47.863	ENSCSAVG00000000150	-	67	47.863	Ciona_savignyi
ENSOCUG00000025587	-	87	83.740	ENSCANG00000036599	-	100	83.740	Colobus_angolensis_palliatus
ENSOCUG00000025587	-	99	95.000	ENSCANG00000035564	C1D	99	95.000	Colobus_angolensis_palliatus
ENSOCUG00000025587	-	100	88.652	ENSCGRG00001023376	C1d	100	88.652	Cricetulus_griseus_chok1gshd
ENSOCUG00000025587	-	100	88.652	ENSCGRG00000010245	C1d	100	88.652	Cricetulus_griseus_crigri
ENSOCUG00000025587	-	99	58.571	ENSCSEG00000000587	c1d	98	58.571	Cynoglossus_semilaevis
ENSOCUG00000025587	-	96	61.029	ENSCVAG00000004603	c1d	87	62.595	Cyprinodon_variegatus
ENSOCUG00000025587	-	87	65.041	ENSDARG00000021112	c1d	96	59.859	Danio_rerio
ENSOCUG00000025587	-	100	87.234	ENSDNOG00000046068	-	100	87.234	Dasypus_novemcinctus
ENSOCUG00000025587	-	100	90.780	ENSDORG00000003300	C1d	100	90.780	Dipodomys_ordii
ENSOCUG00000025587	-	67	91.489	ENSETEG00000014857	C1D	99	91.489	Echinops_telfairi
ENSOCUG00000025587	-	87	56.557	ENSEBUG00000006874	c1d	77	56.557	Eptatretus_burgeri
ENSOCUG00000025587	-	100	94.326	ENSEASG00005007307	C1D	92	94.326	Equus_asinus_asinus
ENSOCUG00000025587	-	99	95.683	ENSECAG00000002187	C1D	99	95.652	Equus_caballus
ENSOCUG00000025587	-	95	63.433	ENSELUG00000014823	c1d	91	63.433	Esox_lucius
ENSOCUG00000025587	-	100	95.035	ENSFCAG00000028933	C1D	100	95.035	Felis_catus
ENSOCUG00000025587	-	93	80.451	ENSFALG00000013640	C1D	81	80.451	Ficedula_albicollis
ENSOCUG00000025587	-	100	92.199	ENSFDAG00000010462	-	100	92.199	Fukomys_damarensis
ENSOCUG00000025587	-	100	73.944	ENSFDAG00000014175	-	100	73.944	Fukomys_damarensis
ENSOCUG00000025587	-	99	62.857	ENSFHEG00000010545	c1d	97	62.857	Fundulus_heteroclitus
ENSOCUG00000025587	-	83	63.248	ENSGMOG00000013911	-	93	63.248	Gadus_morhua
ENSOCUG00000025587	-	90	82.031	ENSGALG00000008765	C1D	89	82.031	Gallus_gallus
ENSOCUG00000025587	-	92	63.077	ENSGAFG00000012578	c1d	83	63.077	Gambusia_affinis
ENSOCUG00000025587	-	89	63.200	ENSGACG00000011981	c1d	98	63.200	Gasterosteus_aculeatus
ENSOCUG00000025587	-	86	81.818	ENSGAGG00000013383	C1D	90	76.692	Gopherus_agassizii
ENSOCUG00000025587	-	99	89.286	ENSGGOG00000025808	-	80	89.286	Gorilla_gorilla
ENSOCUG00000025587	-	99	94.286	ENSGGOG00000022296	-	99	94.286	Gorilla_gorilla
ENSOCUG00000025587	-	100	95.745	ENSGGOG00000025982	-	78	95.745	Gorilla_gorilla
ENSOCUG00000025587	-	82	66.379	ENSHBUG00000018531	c1d	77	63.281	Haplochromis_burtoni
ENSOCUG00000025587	-	98	82.609	ENSHGLG00000021219	-	98	82.609	Heterocephalus_glaber_female
ENSOCUG00000025587	-	92	93.846	ENSHGLG00000012332	-	99	91.429	Heterocephalus_glaber_female
ENSOCUG00000025587	-	100	89.362	ENSHGLG00100000221	-	100	89.362	Heterocephalus_glaber_male
ENSOCUG00000025587	-	98	83.333	ENSHGLG00100019951	-	98	83.333	Heterocephalus_glaber_male
ENSOCUG00000025587	-	94	63.433	ENSHCOG00000014568	C1D	91	63.433	Hippocampus_comes
ENSOCUG00000025587	-	94	63.433	ENSHCOG00000014589	c1d	91	63.433	Hippocampus_comes
ENSOCUG00000025587	-	96	59.712	ENSIPUG00000018661	c1d	92	60.902	Ictalurus_punctatus
ENSOCUG00000025587	-	100	95.745	ENSSTOG00000012346	C1D	100	95.745	Ictidomys_tridecemlineatus
ENSOCUG00000025587	-	98	81.884	ENSJJAG00000005044	-	100	81.884	Jaculus_jaculus
ENSOCUG00000025587	-	89	78.462	ENSJJAG00000023186	-	99	78.462	Jaculus_jaculus
ENSOCUG00000025587	-	98	73.913	ENSJJAG00000016086	-	100	73.913	Jaculus_jaculus
ENSOCUG00000025587	-	98	80.435	ENSJJAG00000009540	-	100	80.435	Jaculus_jaculus
ENSOCUG00000025587	-	96	63.971	ENSKMAG00000015077	c1d	88	63.971	Kryptolebias_marmoratus
ENSOCUG00000025587	-	100	60.993	ENSLBEG00000008351	c1d	91	60.993	Labrus_bergylta
ENSOCUG00000025587	-	88	79.839	ENSLACG00000007516	C1D	83	79.839	Latimeria_chalumnae
ENSOCUG00000025587	-	88	72.800	ENSLOCG00000016024	c1d	85	72.800	Lepisosteus_oculatus
ENSOCUG00000025587	-	100	93.617	ENSLAFG00000002083	C1D	100	93.617	Loxodonta_africana
ENSOCUG00000025587	-	99	95.714	ENSMFAG00000034261	C1D	99	95.714	Macaca_fascicularis
ENSOCUG00000025587	-	99	92.857	ENSMFAG00000034034	-	99	92.857	Macaca_fascicularis
ENSOCUG00000025587	-	99	94.286	ENSMFAG00000028681	-	99	94.286	Macaca_fascicularis
ENSOCUG00000025587	-	99	92.143	ENSMMUG00000043184	-	99	92.143	Macaca_mulatta
ENSOCUG00000025587	-	98	96.377	ENSMMUG00000041557	C1D	99	96.377	Macaca_mulatta
ENSOCUG00000025587	-	99	93.571	ENSMMUG00000017209	-	99	93.571	Macaca_mulatta
ENSOCUG00000025587	-	99	95.714	ENSMNEG00000040612	C1D	99	95.714	Macaca_nemestrina
ENSOCUG00000025587	-	99	92.143	ENSMNEG00000020626	-	99	92.143	Macaca_nemestrina
ENSOCUG00000025587	-	99	95.714	ENSMLEG00000027619	C1D	99	95.714	Mandrillus_leucophaeus
ENSOCUG00000025587	-	99	93.571	ENSMLEG00000028412	-	99	93.571	Mandrillus_leucophaeus
ENSOCUG00000025587	-	91	64.844	ENSMAMG00000022156	c1d	90	64.286	Mastacembelus_armatus
ENSOCUG00000025587	-	82	66.379	ENSMZEG00005027343	c1d	88	63.281	Maylandia_zebra
ENSOCUG00000025587	-	99	77.143	ENSMGAG00000004517	C1D	99	77.143	Meleagris_gallopavo
ENSOCUG00000025587	-	100	87.943	ENSMAUG00000008974	C1d	100	87.943	Mesocricetus_auratus
ENSOCUG00000025587	-	100	92.908	ENSMICG00000032141	C1D	100	92.908	Microcebus_murinus
ENSOCUG00000025587	-	100	88.652	ENSMOCG00000010860	C1d	100	88.652	Microtus_ochrogaster
ENSOCUG00000025587	-	94	64.394	ENSMMOG00000007332	c1d	85	64.394	Mola_mola
ENSOCUG00000025587	-	99	80.851	ENSMODG00000003561	C1D	99	80.851	Monodelphis_domestica
ENSOCUG00000025587	-	94	63.636	ENSMALG00000020864	c1d	95	64.800	Monopterus_albus
ENSOCUG00000025587	-	100	87.234	MGP_CAROLIEiJ_G0016110	C1d	100	89.831	Mus_caroli
ENSOCUG00000025587	-	100	87.234	ENSMUSG00000000581	C1d	100	89.831	Mus_musculus
ENSOCUG00000025587	-	100	89.362	MGP_PahariEiJ_G0016781	C1d	100	90.678	Mus_pahari
ENSOCUG00000025587	-	100	87.234	MGP_SPRETEiJ_G0016952	C1d	100	89.831	Mus_spretus
ENSOCUG00000025587	-	100	94.326	ENSMPUG00000006224	C1D	100	94.326	Mustela_putorius_furo
ENSOCUG00000025587	-	99	90.000	ENSMLUG00000029990	-	99	90.000	Myotis_lucifugus
ENSOCUG00000025587	-	99	93.571	ENSMLUG00000010791	-	99	93.571	Myotis_lucifugus
ENSOCUG00000025587	-	99	91.429	ENSMLUG00000024947	-	99	91.429	Myotis_lucifugus
ENSOCUG00000025587	-	100	86.525	ENSNGAG00000011872	-	100	86.525	Nannospalax_galili
ENSOCUG00000025587	-	89	78.571	ENSNGAG00000012482	-	100	78.571	Nannospalax_galili
ENSOCUG00000025587	-	100	79.433	ENSNGAG00000016675	-	100	79.433	Nannospalax_galili
ENSOCUG00000025587	-	82	65.517	ENSNBRG00000010704	c1d	88	62.500	Neolamprologus_brichardi
ENSOCUG00000025587	-	99	95.714	ENSNLEG00000032919	-	78	95.714	Nomascus_leucogenys
ENSOCUG00000025587	-	100	94.326	ENSOPRG00000009586	C1D	100	94.326	Ochotona_princeps
ENSOCUG00000025587	-	99	93.571	ENSODEG00000011242	-	99	93.571	Octodon_degus
ENSOCUG00000025587	-	100	82.979	ENSODEG00000018525	-	100	82.979	Octodon_degus
ENSOCUG00000025587	-	98	93.478	ENSODEG00000018885	-	99	93.478	Octodon_degus
ENSOCUG00000025587	-	87	65.854	ENSONIG00000001233	c1d	90	62.963	Oreochromis_niloticus
ENSOCUG00000025587	-	78	84.545	ENSOANG00000008385	C1D	99	84.545	Ornithorhynchus_anatinus
ENSOCUG00000025587	-	94	65.152	ENSORLG00000021968	c1d	83	65.152	Oryzias_latipes
ENSOCUG00000025587	-	94	65.152	ENSORLG00020000507	c1d	84	65.152	Oryzias_latipes_hni
ENSOCUG00000025587	-	89	66.400	ENSORLG00015004594	c1d	80	66.400	Oryzias_latipes_hsok
ENSOCUG00000025587	-	94	65.152	ENSOMEG00000004672	c1d	85	65.152	Oryzias_melastigma
ENSOCUG00000025587	-	100	93.617	ENSOGAG00000027934	-	100	93.617	Otolemur_garnettii
ENSOCUG00000025587	-	100	93.617	ENSOARG00000019931	C1D	99	93.617	Ovis_aries
ENSOCUG00000025587	-	99	90.000	ENSPPAG00000040091	-	80	90.000	Pan_paniscus
ENSOCUG00000025587	-	99	96.429	ENSPPAG00000037847	-	99	96.429	Pan_paniscus
ENSOCUG00000025587	-	100	94.326	ENSPPRG00000017045	-	100	94.326	Panthera_pardus
ENSOCUG00000025587	-	100	65.248	ENSPPRG00000022830	-	100	65.248	Panthera_pardus
ENSOCUG00000025587	-	100	95.035	ENSPTIG00000009414	C1D	100	95.035	Panthera_tigris_altaica
ENSOCUG00000025587	-	99	96.429	ENSPTRG00000023558	C1D	99	96.429	Pan_troglodytes
ENSOCUG00000025587	-	99	95.714	ENSPANG00000002886	C1D	78	95.714	Papio_anubis
ENSOCUG00000025587	-	99	92.857	ENSPANG00000000501	-	99	92.857	Papio_anubis
ENSOCUG00000025587	-	99	62.238	ENSPKIG00000004877	c1d	96	62.238	Paramormyrops_kingsleyae
ENSOCUG00000025587	-	94	80.451	ENSPSIG00000010015	C1D	92	80.451	Pelodiscus_sinensis
ENSOCUG00000025587	-	91	63.566	ENSPMGG00000009326	c1d	89	60.870	Periophthalmus_magnuspinnatus
ENSOCUG00000025587	-	99	80.851	ENSPCIG00000018629	-	99	80.851	Phascolarctos_cinereus
ENSOCUG00000025587	-	99	74.820	ENSPCIG00000006831	-	97	74.820	Phascolarctos_cinereus
ENSOCUG00000025587	-	96	63.235	ENSPFOG00000003686	c1d	88	63.235	Poecilia_formosa
ENSOCUG00000025587	-	96	63.235	ENSPLAG00000000228	c1d	96	63.235	Poecilia_latipinna
ENSOCUG00000025587	-	96	63.235	ENSPMEG00000023213	c1d	88	63.235	Poecilia_mexicana
ENSOCUG00000025587	-	99	63.309	ENSPREG00000000742	c1d	98	63.309	Poecilia_reticulata
ENSOCUG00000025587	-	99	90.000	ENSPPYG00000002294	-	99	90.000	Pongo_abelii
ENSOCUG00000025587	-	99	96.429	ENSPPYG00000012354	C1D	77	96.429	Pongo_abelii
ENSOCUG00000025587	-	100	82.270	ENSPCAG00000010088	C1D	79	82.270	Procavia_capensis
ENSOCUG00000025587	-	100	92.908	ENSPCOG00000016112	C1D	100	92.908	Propithecus_coquereli
ENSOCUG00000025587	-	100	93.617	ENSPVAG00000012692	C1D	79	93.617	Pteropus_vampyrus
ENSOCUG00000025587	-	82	66.379	ENSPNYG00000008789	c1d	88	63.281	Pundamilia_nyererei
ENSOCUG00000025587	-	88	70.161	ENSPNAG00000004219	c1d	85	70.161	Pygocentrus_nattereri
ENSOCUG00000025587	-	100	88.652	ENSRNOG00000005982	C1d	100	88.652	Rattus_norvegicus
ENSOCUG00000025587	-	99	92.143	ENSRBIG00000026211	-	99	92.143	Rhinopithecus_bieti
ENSOCUG00000025587	-	99	92.143	ENSRROG00000005944	-	99	92.143	Rhinopithecus_roxellana
ENSOCUG00000025587	-	99	95.714	ENSRROG00000029013	C1D	99	95.714	Rhinopithecus_roxellana
ENSOCUG00000025587	-	99	96.429	ENSSBOG00000025275	C1D	99	96.429	Saimiri_boliviensis_boliviensis
ENSOCUG00000025587	-	99	80.142	ENSSHAG00000008352	C1D	68	80.142	Sarcophilus_harrisii
ENSOCUG00000025587	-	88	67.200	ENSSFOG00015010861	c1d	89	67.200	Scleropages_formosus
ENSOCUG00000025587	-	95	61.194	ENSSMAG00000019230	c1d	86	61.194	Scophthalmus_maximus
ENSOCUG00000025587	-	96	64.964	ENSSDUG00000020213	c1d	88	64.964	Seriola_dumerili
ENSOCUG00000025587	-	94	65.152	ENSSLDG00000017371	c1d	85	65.152	Seriola_lalandi_dorsalis
ENSOCUG00000025587	-	89	79.365	ENSSPUG00000006525	C1D	92	76.296	Sphenodon_punctatus
ENSOCUG00000025587	-	92	65.385	ENSSPAG00000008574	c1d	89	63.768	Stegastes_partitus
ENSOCUG00000025587	-	100	94.326	ENSSSCG00000039331	-	100	94.326	Sus_scrofa
ENSOCUG00000025587	-	85	74.167	ENSSSCG00000035701	-	100	74.167	Sus_scrofa
ENSOCUG00000025587	-	95	79.412	ENSTGUG00000002367	C1D	94	79.412	Taeniopygia_guttata
ENSOCUG00000025587	-	94	60.870	ENSTRUG00000012245	c1d	83	60.870	Takifugu_rubripes
ENSOCUG00000025587	-	99	61.429	ENSTNIG00000009827	c1d	95	61.429	Tetraodon_nigroviridis
ENSOCUG00000025587	-	100	93.617	ENSTBEG00000009797	C1D	100	93.617	Tupaia_belangeri
ENSOCUG00000025587	-	99	94.286	ENSTTRG00000013982	C1D	80	94.286	Tursiops_truncatus
ENSOCUG00000025587	-	100	80.556	ENSUAMG00000025246	C1D	100	80.556	Ursus_americanus
ENSOCUG00000025587	-	72	73.077	ENSUMAG00000006451	-	91	72.807	Ursus_maritimus
ENSOCUG00000025587	-	100	95.035	ENSUMAG00000021118	-	100	95.035	Ursus_maritimus
ENSOCUG00000025587	-	100	92.199	ENSVPAG00000012080	C1D	79	92.199	Vicugna_pacos
ENSOCUG00000025587	-	100	92.199	ENSVVUG00000027629	C1D	88	92.199	Vulpes_vulpes
ENSOCUG00000025587	-	99	68.794	ENSXETG00000025934	c1d	97	68.794	Xenopus_tropicalis
ENSOCUG00000025587	-	89	64.800	ENSXCOG00000013813	c1d	88	63.235	Xiphophorus_couchianus
ENSOCUG00000025587	-	89	64.000	ENSXMAG00000022273	c1d	88	62.500	Xiphophorus_maculatus