EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000025689 (Gene tree)
Gene ID: 100344260
Gene Symbol: RTL3
Alias: -
Full Name: retrotransposon Gag like 3
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 1692 bases
Position: chrX:70307435-70309126
Accession: 100344260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000022831	zf-CCHC	PF00098.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000026232	RTL3-201	1692	XM_008272960	ENSOCUP00000022831	563 (aa)	XP_008271182	G1U0F1

Gene Model

Click here to download ENSOCUG00000025689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000025689's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000025689	RTL3	99	59.358	ENSG00000179300	RTL3	99	60.250	Homo_sapiens
ENSOCUG00000025689	RTL3	100	53.464	ENSTSYG00000008776	RTL3	100	53.464	Carlito_syrichta
ENSOCUG00000025689	RTL3	100	59.689	ENSCGRG00001015952	Rtl3	100	59.689	Cricetulus_griseus_chok1gshd
ENSOCUG00000025689	RTL3	100	65.187	ENSDORG00000029995	Rtl3	100	65.187	Dipodomys_ordii
ENSOCUG00000025689	RTL3	100	60.601	ENSECAG00000029496	RTL3	100	62.898	Equus_caballus
ENSOCUG00000025689	RTL3	100	64.437	ENSSTOG00000027152	RTL3	100	61.526	Ictidomys_tridecemlineatus
ENSOCUG00000025689	RTL3	100	58.259	ENSJJAG00000014790	-	100	59.578	Jaculus_jaculus
ENSOCUG00000025689	RTL3	100	59.375	ENSMAUG00000011823	Rtl3	100	59.375	Mesocricetus_auratus
ENSOCUG00000025689	RTL3	100	58.970	ENSMICG00000004901	RTL3	100	63.588	Microcebus_murinus
ENSOCUG00000025689	RTL3	100	56.304	ENSMOCG00000017247	Rtl3	100	56.304	Microtus_ochrogaster
ENSOCUG00000025689	RTL3	100	58.824	MGP_CAROLIEiJ_G0033333	Rtl3	100	58.824	Mus_caroli
ENSOCUG00000025689	RTL3	100	57.288	ENSMUSG00000047686	Rtl3	100	57.458	Mus_musculus
ENSOCUG00000025689	RTL3	100	57.958	MGP_PahariEiJ_G0031869	Rtl3	100	57.958	Mus_pahari
ENSOCUG00000025689	RTL3	100	57.288	MGP_SPRETEiJ_G0034497	Rtl3	100	57.458	Mus_spretus
ENSOCUG00000025689	RTL3	100	60.522	ENSNGAG00000002851	Rtl3	100	60.522	Nannospalax_galili
ENSOCUG00000025689	RTL3	100	65.187	ENSPCOG00000016711	RTL3	100	66.607	Propithecus_coquereli
ENSOCUG00000025689	RTL3	100	57.043	ENSRNOG00000002429	Rtl3	100	57.043	Rattus_norvegicus
ENSOCUG00000025689	RTL3	100	55.950	ENSTBEG00000002464	RTL3	100	58.792	Tupaia_belangeri