EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000025736 (Gene tree)
Gene ID: 100009191
Gene Symbol: APOBEC1
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 14241 bases
Position: chr8:33903634-33917874
Accession: 100009191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000021115	APOBEC_N	PF08210.11	2.4e-30	1	1
ENSOCUP00000021115	APOBEC_C	PF05240.14	1.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000029737	-	4096	-	ENSOCUP00000021115	267 (aa)	-	G1TVM9

Gene Model

Click here to download ENSOCUG00000025736's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000025736's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000025736	APOBEC1	88	76.271	ENSG00000111701	APOBEC1	100	76.271	Homo_sapiens
ENSOCUG00000025736	APOBEC1	87	72.727	ENSAMEG00000007098	APOBEC1	98	72.727	Ailuropoda_melanoleuca
ENSOCUG00000025736	APOBEC1	64	38.012	ENSACAG00000028578	-	93	38.012	Anolis_carolinensis
ENSOCUG00000025736	APOBEC1	89	74.790	ENSANAG00000027743	APOBEC1	96	74.790	Aotus_nancymaae
ENSOCUG00000025736	APOBEC1	88	71.186	ENSBTAG00000014683	APOBEC1	100	71.186	Bos_taurus
ENSOCUG00000025736	APOBEC1	83	76.018	ENSCJAG00000005398	APOBEC1	100	76.018	Callithrix_jacchus
ENSOCUG00000025736	APOBEC1	88	73.305	ENSCAFG00000013901	APOBEC1	100	73.305	Canis_familiaris
ENSOCUG00000025736	APOBEC1	85	72.124	ENSCAFG00020003511	APOBEC1	95	72.124	Canis_lupus_dingo
ENSOCUG00000025736	APOBEC1	87	70.130	ENSCHIG00000011898	APOBEC1	96	70.130	Capra_hircus
ENSOCUG00000025736	APOBEC1	53	76.596	ENSTSYG00000029141	APOBEC1	100	76.596	Carlito_syrichta
ENSOCUG00000025736	APOBEC1	81	67.907	ENSCAPG00000015882	-	100	67.907	Cavia_aperea
ENSOCUG00000025736	APOBEC1	88	65.532	ENSCPOG00000033068	APOBEC1	99	65.532	Cavia_porcellus
ENSOCUG00000025736	APOBEC1	88	76.695	ENSCCAG00000022258	APOBEC1	100	76.695	Cebus_capucinus
ENSOCUG00000025736	APOBEC1	89	77.311	ENSCATG00000021613	APOBEC1	96	77.311	Cercocebus_atys
ENSOCUG00000025736	APOBEC1	86	68.696	ENSCLAG00000014645	APOBEC1	100	68.696	Chinchilla_lanigera
ENSOCUG00000025736	APOBEC1	71	75.789	ENSCSAG00000009817	APOBEC1	99	75.789	Chlorocebus_sabaeus
ENSOCUG00000025736	APOBEC1	62	45.238	ENSCPBG00000014331	-	70	46.203	Chrysemys_picta_bellii
ENSOCUG00000025736	APOBEC1	70	46.561	ENSCPBG00000014335	-	77	46.561	Chrysemys_picta_bellii
ENSOCUG00000025736	APOBEC1	84	34.934	ENSCPBG00000014327	-	80	37.321	Chrysemys_picta_bellii
ENSOCUG00000025736	APOBEC1	75	48.276	ENSCPBG00000014329	-	56	48.276	Chrysemys_picta_bellii
ENSOCUG00000025736	APOBEC1	68	46.739	ENSCPBG00000014328	-	80	46.739	Chrysemys_picta_bellii
ENSOCUG00000025736	APOBEC1	84	38.696	ENSCPBG00000017398	-	95	38.696	Chrysemys_picta_bellii
ENSOCUG00000025736	APOBEC1	86	77.391	ENSCANG00000038359	APOBEC1	100	77.391	Colobus_angolensis_palliatus
ENSOCUG00000025736	APOBEC1	86	68.122	ENSCGRG00001011130	Apobec1	100	68.122	Cricetulus_griseus_chok1gshd
ENSOCUG00000025736	APOBEC1	86	68.122	ENSCGRG00000008644	Apobec1	100	68.122	Cricetulus_griseus_crigri
ENSOCUG00000025736	APOBEC1	88	72.458	ENSDNOG00000010926	APOBEC1	100	72.458	Dasypus_novemcinctus
ENSOCUG00000025736	APOBEC1	80	65.888	ENSDORG00000023717	Apobec1	100	65.888	Dipodomys_ordii
ENSOCUG00000025736	APOBEC1	87	72.650	ENSETEG00000004867	APOBEC1	99	72.650	Echinops_telfairi
ENSOCUG00000025736	APOBEC1	89	73.840	ENSEASG00005015951	APOBEC1	99	73.840	Equus_asinus_asinus
ENSOCUG00000025736	APOBEC1	71	74.737	ENSECAG00000017163	APOBEC1	99	74.737	Equus_caballus
ENSOCUG00000025736	APOBEC1	82	60.455	ENSEEUG00000009112	-	98	60.455	Erinaceus_europaeus
ENSOCUG00000025736	APOBEC1	76	52.451	ENSEEUG00000007530	-	97	52.451	Erinaceus_europaeus
ENSOCUG00000025736	APOBEC1	88	73.729	ENSFCAG00000009350	APOBEC1	100	73.729	Felis_catus
ENSOCUG00000025736	APOBEC1	55	46.622	ENSFALG00000007257	-	72	46.622	Ficedula_albicollis
ENSOCUG00000025736	APOBEC1	78	58.454	ENSFDAG00000018470	APOBEC1	99	58.454	Fukomys_damarensis
ENSOCUG00000025736	APOBEC1	64	40.113	ENSGAGG00000021745	-	64	40.113	Gopherus_agassizii
ENSOCUG00000025736	APOBEC1	68	43.716	ENSGAGG00000021744	-	71	43.716	Gopherus_agassizii
ENSOCUG00000025736	APOBEC1	60	50.000	ENSGAGG00000004947	-	76	56.557	Gopherus_agassizii
ENSOCUG00000025736	APOBEC1	81	47.489	ENSGAGG00000011837	-	88	50.888	Gopherus_agassizii
ENSOCUG00000025736	APOBEC1	60	45.963	ENSGAGG00000006624	-	58	45.963	Gopherus_agassizii
ENSOCUG00000025736	APOBEC1	88	61.702	ENSHGLG00000001495	APOBEC1	99	61.702	Heterocephalus_glaber_female
ENSOCUG00000025736	APOBEC1	88	60.851	ENSHGLG00100002187	APOBEC1	99	60.851	Heterocephalus_glaber_male
ENSOCUG00000025736	APOBEC1	81	61.860	ENSSTOG00000021971	APOBEC1	100	77.551	Ictidomys_tridecemlineatus
ENSOCUG00000025736	APOBEC1	86	71.616	ENSJJAG00000022108	Apobec1	100	71.616	Jaculus_jaculus
ENSOCUG00000025736	APOBEC1	84	76.233	ENSLAFG00000030837	APOBEC1	100	76.233	Loxodonta_africana
ENSOCUG00000025736	APOBEC1	88	77.966	ENSMFAG00000000277	APOBEC1	100	77.966	Macaca_fascicularis
ENSOCUG00000025736	APOBEC1	88	77.542	ENSMNEG00000029670	APOBEC1	100	77.542	Macaca_nemestrina
ENSOCUG00000025736	APOBEC1	88	77.542	ENSMLEG00000036301	APOBEC1	100	77.542	Mandrillus_leucophaeus
ENSOCUG00000025736	APOBEC1	81	66.667	ENSMAUG00000022167	Apobec1	97	66.667	Mesocricetus_auratus
ENSOCUG00000025736	APOBEC1	88	75.000	ENSMICG00000043645	APOBEC1	100	75.000	Microcebus_murinus
ENSOCUG00000025736	APOBEC1	88	63.559	ENSMODG00000018004	APOBEC1	100	63.559	Monodelphis_domestica
ENSOCUG00000025736	APOBEC1	85	68.860	ENSMUSG00000040613	Apobec1	99	70.536	Mus_musculus
ENSOCUG00000025736	APOBEC1	85	66.667	MGP_PahariEiJ_G0022580	-	99	66.964	Mus_pahari
ENSOCUG00000025736	APOBEC1	85	68.860	MGP_SPRETEiJ_G0029857	Apobec1	99	70.536	Mus_spretus
ENSOCUG00000025736	APOBEC1	88	74.153	ENSMPUG00000017532	APOBEC1	100	74.153	Mustela_putorius_furo
ENSOCUG00000025736	APOBEC1	86	66.812	ENSNGAG00000022607	Apobec1	100	66.812	Nannospalax_galili
ENSOCUG00000025736	APOBEC1	88	77.542	ENSNLEG00000005342	APOBEC1	100	77.542	Nomascus_leucogenys
ENSOCUG00000025736	APOBEC1	88	61.441	ENSMEUG00000013406	APOBEC1	100	61.441	Notamacropus_eugenii
ENSOCUG00000025736	APOBEC1	68	62.983	ENSOPRG00000009508	-	100	62.983	Ochotona_princeps
ENSOCUG00000025736	APOBEC1	87	72.294	ENSOGAG00000026415	APOBEC1	98	72.294	Otolemur_garnettii
ENSOCUG00000025736	APOBEC1	88	70.763	ENSOARG00000002072	APOBEC1	99	70.763	Ovis_aries
ENSOCUG00000025736	APOBEC1	87	70.130	ENSPPAG00000027657	APOBEC1	98	70.130	Pan_paniscus
ENSOCUG00000025736	APOBEC1	88	73.305	ENSPPRG00000012182	APOBEC1	100	73.305	Panthera_pardus
ENSOCUG00000025736	APOBEC1	88	73.305	ENSPTIG00000020280	APOBEC1	100	73.305	Panthera_tigris_altaica
ENSOCUG00000025736	APOBEC1	88	77.119	ENSPTRG00000004614	APOBEC1	100	77.119	Pan_troglodytes
ENSOCUG00000025736	APOBEC1	88	77.542	ENSPANG00000021027	APOBEC1	100	77.542	Papio_anubis
ENSOCUG00000025736	APOBEC1	88	38.559	ENSPSIG00000012568	-	99	38.559	Pelodiscus_sinensis
ENSOCUG00000025736	APOBEC1	51	48.077	ENSPSIG00000012791	-	74	48.077	Pelodiscus_sinensis
ENSOCUG00000025736	APOBEC1	86	65.939	ENSPEMG00000023841	Apobec1	100	65.939	Peromyscus_maniculatus_bairdii
ENSOCUG00000025736	APOBEC1	88	66.102	ENSPCIG00000023973	APOBEC1	100	66.102	Phascolarctos_cinereus
ENSOCUG00000025736	APOBEC1	89	75.210	ENSPPYG00000004228	APOBEC1	96	75.210	Pongo_abelii
ENSOCUG00000025736	APOBEC1	70	75.936	ENSPCAG00000008733	APOBEC1	100	75.936	Procavia_capensis
ENSOCUG00000025736	APOBEC1	83	77.477	ENSPCOG00000013957	APOBEC1	98	77.477	Propithecus_coquereli
ENSOCUG00000025736	APOBEC1	88	59.746	ENSPVAG00000010709	APOBEC1	100	59.746	Pteropus_vampyrus
ENSOCUG00000025736	APOBEC1	85	65.351	ENSRNOG00000015411	Apobec1	99	65.351	Rattus_norvegicus
ENSOCUG00000025736	APOBEC1	88	76.271	ENSRBIG00000031161	APOBEC1	100	76.271	Rhinopithecus_bieti
ENSOCUG00000025736	APOBEC1	88	76.271	ENSRROG00000033576	APOBEC1	100	76.271	Rhinopithecus_roxellana
ENSOCUG00000025736	APOBEC1	65	76.301	ENSSBOG00000030587	APOBEC1	98	76.301	Saimiri_boliviensis_boliviensis
ENSOCUG00000025736	APOBEC1	85	65.487	ENSSHAG00000008925	APOBEC1	99	65.487	Sarcophilus_harrisii
ENSOCUG00000025736	APOBEC1	64	64.535	ENSSARG00000000032	-	100	64.535	Sorex_araneus
ENSOCUG00000025736	APOBEC1	76	41.063	ENSSPUG00000009044	-	79	41.063	Sphenodon_punctatus
ENSOCUG00000025736	APOBEC1	88	74.153	ENSSSCG00000000668	APOBEC1	100	74.153	Sus_scrofa
ENSOCUG00000025736	APOBEC1	54	49.315	ENSTGUG00000013118	-	100	49.315	Taeniopygia_guttata
ENSOCUG00000025736	APOBEC1	83	69.231	ENSTBEG00000010043	APOBEC1	94	69.231	Tupaia_belangeri
ENSOCUG00000025736	APOBEC1	70	71.658	ENSTTRG00000014015	APOBEC1	100	71.658	Tursiops_truncatus
ENSOCUG00000025736	APOBEC1	90	70.833	ENSUAMG00000011636	APOBEC1	98	70.833	Ursus_americanus
ENSOCUG00000025736	APOBEC1	90	70.417	ENSUMAG00000016552	APOBEC1	98	70.417	Ursus_maritimus
ENSOCUG00000025736	APOBEC1	88	69.915	ENSVPAG00000001343	APOBEC1	100	69.915	Vicugna_pacos
ENSOCUG00000025736	APOBEC1	88	73.305	ENSVVUG00000010522	APOBEC1	100	73.305	Vulpes_vulpes