EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000025924 (Gene tree)
Gene ID: 100351903
Gene Symbol: NXT1
Alias: -
Full Name: nuclear transport factor 2 like export factor 1
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 423 bases
Position: chr4:13605936-13606358
Accession: 100351903
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000023941	NTF2	PF02136.20	4.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000023227	NXT1-201	423	XM_002710938	ENSOCUP00000023941	140 (aa)	XP_002710984	G1U3H8

Gene Model

Click here to download ENSOCUG00000025924's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03008	Ribosome biogenesis in eukaryotes	KEGG
ocu03013	RNA transport	KEGG
ocu03015	mRNA surveillance pathway	KEGG
ocu05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000025924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000025924	NXT1	99	76.812	ENSOCUG00000008261	NXT2	70	76.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000025924	NXT1	100	97.857	ENSG00000132661	NXT1	100	97.857	Homo_sapiens
ENSOCUG00000025924	NXT1	100	97.143	ENSAMEG00000018729	NXT1	100	97.143	Ailuropoda_melanoleuca
ENSOCUG00000025924	NXT1	100	97.143	ENSANAG00000010003	NXT1	100	97.143	Aotus_nancymaae
ENSOCUG00000025924	NXT1	99	97.842	ENSBTAG00000004993	NXT1	99	97.842	Bos_taurus
ENSOCUG00000025924	NXT1	100	97.143	ENSCJAG00000044836	NXT1	100	97.143	Callithrix_jacchus
ENSOCUG00000025924	NXT1	99	97.101	ENSTSYG00000007592	NXT1	99	97.101	Carlito_syrichta
ENSOCUG00000025924	NXT1	100	96.429	ENSCAPG00000012780	NXT1	100	96.429	Cavia_aperea
ENSOCUG00000025924	NXT1	100	96.429	ENSCPOG00000008817	NXT1	100	96.429	Cavia_porcellus
ENSOCUG00000025924	NXT1	100	97.143	ENSCCAG00000015478	NXT1	100	97.143	Cebus_capucinus
ENSOCUG00000025924	NXT1	100	97.857	ENSCATG00000019026	NXT1	100	97.857	Cercocebus_atys
ENSOCUG00000025924	NXT1	100	95.714	ENSCLAG00000012493	NXT1	100	95.714	Chinchilla_lanigera
ENSOCUG00000025924	NXT1	100	97.857	ENSCSAG00000018678	NXT1	100	97.857	Chlorocebus_sabaeus
ENSOCUG00000025924	NXT1	100	91.429	ENSCHOG00000007142	NXT1	100	91.429	Choloepus_hoffmanni
ENSOCUG00000025924	NXT1	100	97.857	ENSCANG00000001309	NXT1	100	97.857	Colobus_angolensis_palliatus
ENSOCUG00000025924	NXT1	100	95.714	ENSCGRG00001007062	-	100	95.714	Cricetulus_griseus_chok1gshd
ENSOCUG00000025924	NXT1	100	76.224	ENSCGRG00001014411	-	100	76.224	Cricetulus_griseus_chok1gshd
ENSOCUG00000025924	NXT1	100	76.224	ENSCGRG00000005554	-	100	76.224	Cricetulus_griseus_crigri
ENSOCUG00000025924	NXT1	100	95.714	ENSCGRG00000012771	-	100	95.714	Cricetulus_griseus_crigri
ENSOCUG00000025924	NXT1	99	57.857	ENSDNOG00000040022	-	98	57.857	Dasypus_novemcinctus
ENSOCUG00000025924	NXT1	99	92.806	ENSDNOG00000015112	-	99	92.806	Dasypus_novemcinctus
ENSOCUG00000025924	NXT1	100	97.857	ENSDORG00000024690	Nxt1	100	97.857	Dipodomys_ordii
ENSOCUG00000025924	NXT1	100	95.714	ENSEASG00005002553	NXT1	100	95.714	Equus_asinus_asinus
ENSOCUG00000025924	NXT1	100	95.714	ENSECAG00000035032	NXT1	100	95.714	Equus_caballus
ENSOCUG00000025924	NXT1	99	94.928	ENSEEUG00000013818	NXT1	99	94.928	Erinaceus_europaeus
ENSOCUG00000025924	NXT1	100	97.857	ENSFCAG00000006482	NXT1	100	97.857	Felis_catus
ENSOCUG00000025924	NXT1	96	79.259	ENSFDAG00000006553	-	97	79.259	Fukomys_damarensis
ENSOCUG00000025924	NXT1	99	97.122	ENSFDAG00000012027	-	99	97.122	Fukomys_damarensis
ENSOCUG00000025924	NXT1	76	82.075	ENSGGOG00000022722	-	80	82.075	Gorilla_gorilla
ENSOCUG00000025924	NXT1	100	97.857	ENSGGOG00000012539	-	100	97.857	Gorilla_gorilla
ENSOCUG00000025924	NXT1	100	96.429	ENSHGLG00000007882	NXT1	100	96.429	Heterocephalus_glaber_female
ENSOCUG00000025924	NXT1	100	96.429	ENSHGLG00100015157	NXT1	100	96.429	Heterocephalus_glaber_male
ENSOCUG00000025924	NXT1	100	95.714	ENSSTOG00000026331	NXT1	100	95.714	Ictidomys_tridecemlineatus
ENSOCUG00000025924	NXT1	100	80.000	ENSJJAG00000013926	-	100	80.000	Jaculus_jaculus
ENSOCUG00000025924	NXT1	100	97.857	ENSJJAG00000012022	-	100	97.857	Jaculus_jaculus
ENSOCUG00000025924	NXT1	100	94.286	ENSLAFG00000029098	NXT1	100	94.286	Loxodonta_africana
ENSOCUG00000025924	NXT1	100	97.857	ENSMFAG00000019296	NXT1	100	97.857	Macaca_fascicularis
ENSOCUG00000025924	NXT1	100	97.857	ENSMMUG00000022386	NXT1	100	97.857	Macaca_mulatta
ENSOCUG00000025924	NXT1	100	97.857	ENSMNEG00000027745	NXT1	100	97.857	Macaca_nemestrina
ENSOCUG00000025924	NXT1	100	97.857	ENSMLEG00000027268	NXT1	100	97.857	Mandrillus_leucophaeus
ENSOCUG00000025924	NXT1	100	95.714	ENSMAUG00000004141	Nxt1	100	95.714	Mesocricetus_auratus
ENSOCUG00000025924	NXT1	100	95.714	ENSMICG00000044853	NXT1	100	95.714	Microcebus_murinus
ENSOCUG00000025924	NXT1	100	93.571	ENSMOCG00000018712	Nxt1	100	93.571	Microtus_ochrogaster
ENSOCUG00000025924	NXT1	100	97.857	MGP_CAROLIEiJ_G0024408	Nxt1	100	97.857	Mus_caroli
ENSOCUG00000025924	NXT1	100	97.857	ENSMUSG00000036992	Nxt1	100	97.857	Mus_musculus
ENSOCUG00000025924	NXT1	100	96.429	MGP_PahariEiJ_G0025851	Nxt1	100	96.429	Mus_pahari
ENSOCUG00000025924	NXT1	100	97.857	MGP_SPRETEiJ_G0025326	Nxt1	100	97.857	Mus_spretus
ENSOCUG00000025924	NXT1	100	97.857	ENSMPUG00000019260	NXT1	100	97.857	Mustela_putorius_furo
ENSOCUG00000025924	NXT1	100	97.143	ENSMLUG00000006881	NXT1	100	97.143	Myotis_lucifugus
ENSOCUG00000025924	NXT1	100	97.857	ENSNGAG00000000803	Nxt1	100	97.857	Nannospalax_galili
ENSOCUG00000025924	NXT1	100	98.571	ENSOPRG00000006167	NXT1	100	98.571	Ochotona_princeps
ENSOCUG00000025924	NXT1	100	95.000	ENSODEG00000019900	NXT1	100	95.000	Octodon_degus
ENSOCUG00000025924	NXT1	100	97.857	ENSOGAG00000000717	NXT1	99	97.857	Otolemur_garnettii
ENSOCUG00000025924	NXT1	100	97.857	ENSPPAG00000020479	NXT1	100	97.857	Pan_paniscus
ENSOCUG00000025924	NXT1	100	97.857	ENSPPRG00000021392	NXT1	100	97.857	Panthera_pardus
ENSOCUG00000025924	NXT1	100	97.857	ENSPTIG00000003788	NXT1	100	97.857	Panthera_tigris_altaica
ENSOCUG00000025924	NXT1	100	97.857	ENSPTRG00000013319	NXT1	100	97.857	Pan_troglodytes
ENSOCUG00000025924	NXT1	100	97.857	ENSPANG00000023254	NXT1	100	97.857	Papio_anubis
ENSOCUG00000025924	NXT1	100	95.714	ENSPEMG00000010397	Nxt1	100	95.714	Peromyscus_maniculatus_bairdii
ENSOCUG00000025924	NXT1	100	97.857	ENSPPYG00000010765	NXT1	100	97.857	Pongo_abelii
ENSOCUG00000025924	NXT1	100	95.000	ENSPCAG00000009373	-	100	95.000	Procavia_capensis
ENSOCUG00000025924	NXT1	100	97.857	ENSPCOG00000025624	NXT1	99	97.857	Propithecus_coquereli
ENSOCUG00000025924	NXT1	100	97.143	ENSPVAG00000014055	NXT1	100	97.143	Pteropus_vampyrus
ENSOCUG00000025924	NXT1	100	97.143	ENSRNOG00000004700	Nxt1	100	97.143	Rattus_norvegicus
ENSOCUG00000025924	NXT1	100	97.857	ENSRBIG00000021433	NXT1	100	97.857	Rhinopithecus_bieti
ENSOCUG00000025924	NXT1	100	97.857	ENSRROG00000026657	NXT1	100	97.857	Rhinopithecus_roxellana
ENSOCUG00000025924	NXT1	100	97.143	ENSSBOG00000036378	NXT1	100	97.143	Saimiri_boliviensis_boliviensis
ENSOCUG00000025924	NXT1	100	96.429	ENSSARG00000007842	NXT1	100	96.429	Sorex_araneus
ENSOCUG00000025924	NXT1	99	95.683	ENSSSCG00000007119	NXT1	99	95.683	Sus_scrofa
ENSOCUG00000025924	NXT1	100	98.571	ENSTBEG00000012251	NXT1	100	98.571	Tupaia_belangeri
ENSOCUG00000025924	NXT1	99	98.561	ENSTTRG00000011348	NXT1	99	98.561	Tursiops_truncatus
ENSOCUG00000025924	NXT1	100	97.143	ENSUAMG00000021860	NXT1	100	97.143	Ursus_americanus
ENSOCUG00000025924	NXT1	100	97.143	ENSUMAG00000004062	NXT1	100	97.143	Ursus_maritimus
ENSOCUG00000025924	NXT1	100	97.857	ENSVVUG00000012091	NXT1	100	97.857	Vulpes_vulpes