EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000025939 (Gene tree)
Gene ID: 100350830
Gene Symbol: DDX20
Alias: -
Full Name: DEAD-box helicase 20
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 13598 bases
Position: chr13:52435919-52449516
Accession: 100350830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000019982	ResIII	PF04851.15	1.4e-05	1	1
ENSOCUP00000026721	ResIII	PF04851.15	1.4e-05	1	1
ENSOCUP00000026721	DEAD	PF00270.29	2.8e-32	1	1
ENSOCUP00000019982	DEAD	PF00270.29	2.8e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000033674	DDX20-202	2622	XM_002715772	ENSOCUP00000026721	826 (aa)	XP_002715818	U3KNB2
ENSOCUT00000026123	DDX20-201	2478	-	ENSOCUP00000019982	825 (aa)	-	G1TSG6

Gene Model

Click here to download ENSOCUG00000025939's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000025939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000025939	DDX20	100	88.620	ENSG00000064703	DDX20	97	89.950	Homo_sapiens
ENSOCUG00000025939	DDX20	95	51.149	ENSAPOG00000017383	DDX20	98	51.140	Acanthochromis_polyacanthus
ENSOCUG00000025939	DDX20	99	86.732	ENSAMEG00000005344	DDX20	99	85.523	Ailuropoda_melanoleuca
ENSOCUG00000025939	DDX20	71	61.356	ENSACIG00000013095	ddx20	70	61.356	Amphilophus_citrinellus
ENSOCUG00000025939	DDX20	95	51.387	ENSAOCG00000013474	DDX20	98	51.453	Amphiprion_ocellaris
ENSOCUG00000025939	DDX20	95	51.023	ENSAPEG00000006690	ddx20	98	51.087	Amphiprion_percula
ENSOCUG00000025939	DDX20	95	50.955	ENSATEG00000002941	ddx20	76	62.458	Anabas_testudineus
ENSOCUG00000025939	DDX20	89	49.332	ENSAPLG00000013826	DDX20	99	49.064	Anas_platyrhynchos
ENSOCUG00000025939	DDX20	94	57.821	ENSACAG00000006235	DDX20	98	57.234	Anolis_carolinensis
ENSOCUG00000025939	DDX20	99	88.575	ENSANAG00000037881	DDX20	97	89.586	Aotus_nancymaae
ENSOCUG00000025939	DDX20	71	62.606	ENSACLG00000009485	ddx20	70	62.606	Astatotilapia_calliptera
ENSOCUG00000025939	DDX20	70	62.630	ENSAMXG00000040738	ddx20	74	62.630	Astyanax_mexicanus
ENSOCUG00000025939	DDX20	99	88.971	ENSBTAG00000018717	DDX20	97	89.737	Bos_taurus
ENSOCUG00000025939	DDX20	99	87.838	ENSCJAG00000013428	DDX20	96	85.036	Callithrix_jacchus
ENSOCUG00000025939	DDX20	99	84.848	ENSCAFG00000013674	DDX20	99	85.757	Canis_familiaris
ENSOCUG00000025939	DDX20	97	86.409	ENSCAFG00020008055	DDX20	93	96.785	Canis_lupus_dingo
ENSOCUG00000025939	DDX20	99	89.706	ENSCHIG00000011219	DDX20	97	90.488	Capra_hircus
ENSOCUG00000025939	DDX20	97	86.816	ENSTSYG00000000153	DDX20	97	86.675	Carlito_syrichta
ENSOCUG00000025939	DDX20	84	78.902	ENSCAPG00000017427	DDX20	100	78.902	Cavia_aperea
ENSOCUG00000025939	DDX20	100	83.535	ENSCPOG00000032340	DDX20	98	84.328	Cavia_porcellus
ENSOCUG00000025939	DDX20	100	88.620	ENSCCAG00000026759	DDX20	97	89.711	Cebus_capucinus
ENSOCUG00000025939	DDX20	100	88.150	ENSCATG00000039030	DDX20	97	89.586	Cercocebus_atys
ENSOCUG00000025939	DDX20	100	84.867	ENSCLAG00000008874	DDX20	97	85.875	Chinchilla_lanigera
ENSOCUG00000025939	DDX20	100	88.271	ENSCSAG00000001582	DDX20	96	89.711	Chlorocebus_sabaeus
ENSOCUG00000025939	DDX20	63	91.317	ENSCHOG00000002610	DDX20	82	91.317	Choloepus_hoffmanni
ENSOCUG00000025939	DDX20	94	63.171	ENSCPBG00000021256	DDX20	98	63.218	Chrysemys_picta_bellii
ENSOCUG00000025939	DDX20	100	88.150	ENSCANG00000041894	DDX20	97	89.460	Colobus_angolensis_palliatus
ENSOCUG00000025939	DDX20	99	83.578	ENSCGRG00001014132	Ddx20	97	84.837	Cricetulus_griseus_chok1gshd
ENSOCUG00000025939	DDX20	87	82.500	ENSCGRG00000002300	Ddx20	100	82.778	Cricetulus_griseus_crigri
ENSOCUG00000025939	DDX20	66	57.344	ENSCSEG00000018265	DDX20	70	57.344	Cynoglossus_semilaevis
ENSOCUG00000025939	DDX20	95	50.435	ENSCVAG00000014821	ddx20	99	50.675	Cyprinodon_variegatus
ENSOCUG00000025939	DDX20	70	62.222	ENSDARG00000061204	ddx20	96	52.050	Danio_rerio
ENSOCUG00000025939	DDX20	99	87.838	ENSDNOG00000030865	DDX20	97	88.331	Dasypus_novemcinctus
ENSOCUG00000025939	DDX20	98	87.593	ENSDORG00000011660	Ddx20	98	87.970	Dipodomys_ordii
ENSOCUG00000025939	DDX20	62	96.825	ENSETEG00000002726	DDX20	64	95.960	Echinops_telfairi
ENSOCUG00000025939	DDX20	99	88.698	ENSEASG00005005454	DDX20	99	87.348	Equus_asinus_asinus
ENSOCUG00000025939	DDX20	99	88.821	ENSECAG00000013565	DDX20	99	87.470	Equus_caballus
ENSOCUG00000025939	DDX20	95	47.889	ENSELUG00000010260	ddx20	99	47.889	Esox_lucius
ENSOCUG00000025939	DDX20	99	87.838	ENSFCAG00000025736	DDX20	97	88.708	Felis_catus
ENSOCUG00000025939	DDX20	87	56.438	ENSFALG00000000666	DDX20	99	56.438	Ficedula_albicollis
ENSOCUG00000025939	DDX20	100	80.326	ENSFDAG00000001140	DDX20	97	80.912	Fukomys_damarensis
ENSOCUG00000025939	DDX20	95	52.970	ENSFHEG00000019742	ddx20	99	52.104	Fundulus_heteroclitus
ENSOCUG00000025939	DDX20	94	60.536	ENSGALG00000001504	DDX20	99	60.664	Gallus_gallus
ENSOCUG00000025939	DDX20	95	52.736	ENSGAFG00000006427	ddx20	99	52.174	Gambusia_affinis
ENSOCUG00000025939	DDX20	94	64.041	ENSGAGG00000000130	DDX20	99	64.041	Gopherus_agassizii
ENSOCUG00000025939	DDX20	100	88.862	ENSGGOG00000015576	DDX20	97	90.201	Gorilla_gorilla
ENSOCUG00000025939	DDX20	71	62.944	ENSHBUG00000007853	ddx20	70	62.944	Haplochromis_burtoni
ENSOCUG00000025939	DDX20	100	84.988	ENSHGLG00000014848	DDX20	97	85.305	Heterocephalus_glaber_female
ENSOCUG00000025939	DDX20	100	84.988	ENSHGLG00100003740	DDX20	97	85.305	Heterocephalus_glaber_male
ENSOCUG00000025939	DDX20	95	51.685	ENSHCOG00000001915	ddx20	99	51.432	Hippocampus_comes
ENSOCUG00000025939	DDX20	70	62.628	ENSIPUG00000004876	ddx20	69	62.457	Ictalurus_punctatus
ENSOCUG00000025939	DDX20	99	89.558	ENSSTOG00000029089	DDX20	97	90.213	Ictidomys_tridecemlineatus
ENSOCUG00000025939	DDX20	100	84.988	ENSJJAG00000011198	Ddx20	99	84.185	Jaculus_jaculus
ENSOCUG00000025939	DDX20	95	51.636	ENSKMAG00000019022	ddx20	99	52.020	Kryptolebias_marmoratus
ENSOCUG00000025939	DDX20	95	49.815	ENSLBEG00000019194	ddx20	70	61.121	Labrus_bergylta
ENSOCUG00000025939	DDX20	95	54.691	ENSLACG00000018491	DDX20	72	66.724	Latimeria_chalumnae
ENSOCUG00000025939	DDX20	95	54.479	ENSLOCG00000010372	ddx20	100	53.511	Lepisosteus_oculatus
ENSOCUG00000025939	DDX20	98	82.411	ENSLAFG00000014646	DDX20	97	83.333	Loxodonta_africana
ENSOCUG00000025939	DDX20	100	88.634	ENSMFAG00000031755	DDX20	97	89.962	Macaca_fascicularis
ENSOCUG00000025939	DDX20	100	88.271	ENSMNEG00000005757	DDX20	97	89.962	Macaca_nemestrina
ENSOCUG00000025939	DDX20	97	89.068	ENSMLEG00000005722	DDX20	97	89.586	Mandrillus_leucophaeus
ENSOCUG00000025939	DDX20	95	50.544	ENSMAMG00000009654	ddx20	70	61.969	Mastacembelus_armatus
ENSOCUG00000025939	DDX20	71	62.606	ENSMZEG00005027081	ddx20	70	62.606	Maylandia_zebra
ENSOCUG00000025939	DDX20	92	59.298	ENSMGAG00000004624	DDX20	99	59.168	Meleagris_gallopavo
ENSOCUG00000025939	DDX20	97	84.270	ENSMAUG00000010659	Ddx20	99	82.403	Mesocricetus_auratus
ENSOCUG00000025939	DDX20	100	89.952	ENSMICG00000011509	DDX20	97	91.092	Microcebus_murinus
ENSOCUG00000025939	DDX20	99	82.353	ENSMOCG00000012954	Ddx20	97	83.835	Microtus_ochrogaster
ENSOCUG00000025939	DDX20	95	50.993	ENSMMOG00000013103	ddx20	99	50.939	Mola_mola
ENSOCUG00000025939	DDX20	96	75.601	ENSMODG00000001311	DDX20	97	74.536	Monodelphis_domestica
ENSOCUG00000025939	DDX20	95	49.341	ENSMALG00000010740	ddx20	83	61.329	Monopterus_albus
ENSOCUG00000025939	DDX20	99	83.436	MGP_CAROLIEiJ_G0025474	Ddx20	99	82.382	Mus_caroli
ENSOCUG00000025939	DDX20	99	82.699	ENSMUSG00000027905	Ddx20	99	81.652	Mus_musculus
ENSOCUG00000025939	DDX20	96	83.838	MGP_PahariEiJ_G0026919	Ddx20	99	81.432	Mus_pahari
ENSOCUG00000025939	DDX20	99	83.067	MGP_SPRETEiJ_G0026423	Ddx20	99	81.896	Mus_spretus
ENSOCUG00000025939	DDX20	99	87.961	ENSMPUG00000004921	DDX20	97	88.945	Mustela_putorius_furo
ENSOCUG00000025939	DDX20	84	82.659	ENSMLUG00000009676	DDX20	100	82.659	Myotis_lucifugus
ENSOCUG00000025939	DDX20	100	85.593	ENSNGAG00000022953	Ddx20	97	86.125	Nannospalax_galili
ENSOCUG00000025939	DDX20	95	53.194	ENSNBRG00000020244	ddx20	99	52.638	Neolamprologus_brichardi
ENSOCUG00000025939	DDX20	100	89.225	ENSNLEG00000004040	DDX20	97	90.578	Nomascus_leucogenys
ENSOCUG00000025939	DDX20	61	78.238	ENSMEUG00000013459	-	62	78.892	Notamacropus_eugenii
ENSOCUG00000025939	DDX20	65	96.353	ENSOPRG00000004035	DDX20	81	96.353	Ochotona_princeps
ENSOCUG00000025939	DDX20	71	62.606	ENSONIG00000012436	ddx20	99	52.351	Oreochromis_niloticus
ENSOCUG00000025939	DDX20	71	73.116	ENSOANG00000003318	DDX20	99	68.740	Ornithorhynchus_anatinus
ENSOCUG00000025939	DDX20	95	51.784	ENSORLG00000008949	ddx20	99	52.104	Oryzias_latipes
ENSOCUG00000025939	DDX20	95	51.358	ENSORLG00020003852	ddx20	99	51.601	Oryzias_latipes_hni
ENSOCUG00000025939	DDX20	95	51.496	ENSORLG00015020167	ddx20	99	51.177	Oryzias_latipes_hsok
ENSOCUG00000025939	DDX20	95	51.095	ENSOMEG00000013657	ddx20	99	51.166	Oryzias_melastigma
ENSOCUG00000025939	DDX20	100	88.513	ENSOGAG00000010503	DDX20	99	87.728	Otolemur_garnettii
ENSOCUG00000025939	DDX20	99	89.487	ENSOARG00000019651	DDX20	97	90.262	Ovis_aries
ENSOCUG00000025939	DDX20	100	88.620	ENSPPAG00000031680	DDX20	97	89.950	Pan_paniscus
ENSOCUG00000025939	DDX20	99	88.206	ENSPPRG00000022979	DDX20	97	88.959	Panthera_pardus
ENSOCUG00000025939	DDX20	100	88.499	ENSPTRG00000001105	DDX20	97	89.950	Pan_troglodytes
ENSOCUG00000025939	DDX20	100	88.392	ENSPANG00000017985	DDX20	97	89.837	Papio_anubis
ENSOCUG00000025939	DDX20	92	50.064	ENSPKIG00000020161	ddx20	99	50.970	Paramormyrops_kingsleyae
ENSOCUG00000025939	DDX20	88	60.516	ENSPSIG00000003636	DDX20	100	60.734	Pelodiscus_sinensis
ENSOCUG00000025939	DDX20	95	50.936	ENSPMGG00000005966	ddx20	99	50.187	Periophthalmus_magnuspinnatus
ENSOCUG00000025939	DDX20	99	85.399	ENSPEMG00000019595	Ddx20	99	84.083	Peromyscus_maniculatus_bairdii
ENSOCUG00000025939	DDX20	99	74.268	ENSPCIG00000027721	DDX20	98	75.093	Phascolarctos_cinereus
ENSOCUG00000025939	DDX20	95	51.585	ENSPFOG00000010540	ddx20	99	53.051	Poecilia_formosa
ENSOCUG00000025939	DDX20	95	53.242	ENSPLAG00000009925	ddx20	99	53.176	Poecilia_latipinna
ENSOCUG00000025939	DDX20	95	51.515	ENSPMEG00000005998	ddx20	99	52.919	Poecilia_mexicana
ENSOCUG00000025939	DDX20	95	51.779	ENSPREG00000018837	ddx20	73	62.799	Poecilia_reticulata
ENSOCUG00000025939	DDX20	100	88.741	ENSPPYG00000001026	DDX20	97	90.201	Pongo_abelii
ENSOCUG00000025939	DDX20	100	89.346	ENSPCOG00000025185	DDX20	97	90.339	Propithecus_coquereli
ENSOCUG00000025939	DDX20	100	86.683	ENSPVAG00000004664	DDX20	97	87.829	Pteropus_vampyrus
ENSOCUG00000025939	DDX20	71	62.606	ENSPNYG00000014433	ddx20	70	62.606	Pundamilia_nyererei
ENSOCUG00000025939	DDX20	74	59.289	ENSPNAG00000018148	ddx20	99	51.578	Pygocentrus_nattereri
ENSOCUG00000025939	DDX20	100	83.313	ENSRNOG00000015274	Ddx20	97	84.442	Rattus_norvegicus
ENSOCUG00000025939	DDX20	100	88.513	ENSRBIG00000030629	DDX20	97	89.837	Rhinopithecus_bieti
ENSOCUG00000025939	DDX20	100	88.513	ENSRROG00000030608	DDX20	97	89.837	Rhinopithecus_roxellana
ENSOCUG00000025939	DDX20	100	88.741	ENSSBOG00000024789	DDX20	97	89.837	Saimiri_boliviensis_boliviensis
ENSOCUG00000025939	DDX20	84	73.199	ENSSHAG00000014518	DDX20	99	73.199	Sarcophilus_harrisii
ENSOCUG00000025939	DDX20	95	52.015	ENSSFOG00015008354	ddx20	72	62.925	Scleropages_formosus
ENSOCUG00000025939	DDX20	70	61.897	ENSSMAG00000007498	ddx20	69	60.399	Scophthalmus_maximus
ENSOCUG00000025939	DDX20	95	52.781	ENSSDUG00000015980	ddx20	98	53.317	Seriola_dumerili
ENSOCUG00000025939	DDX20	78	61.913	ENSSLDG00000000437	ddx20	79	61.577	Seriola_lalandi_dorsalis
ENSOCUG00000025939	DDX20	88	72.476	ENSSARG00000013569	DDX20	88	72.476	Sorex_araneus
ENSOCUG00000025939	DDX20	95	51.511	ENSSPAG00000020022	ddx20	68	62.373	Stegastes_partitus
ENSOCUG00000025939	DDX20	98	85.767	ENSSSCG00000006783	DDX20	96	86.483	Sus_scrofa
ENSOCUG00000025939	DDX20	75	66.188	ENSTGUG00000013660	DDX20	85	68.771	Taeniopygia_guttata
ENSOCUG00000025939	DDX20	95	49.692	ENSTRUG00000023712	ddx20	99	51.186	Takifugu_rubripes
ENSOCUG00000025939	DDX20	95	50.483	ENSTNIG00000019425	ddx20	99	49.879	Tetraodon_nigroviridis
ENSOCUG00000025939	DDX20	84	87.368	ENSTTRG00000005131	DDX20	81	93.168	Tursiops_truncatus
ENSOCUG00000025939	DDX20	99	84.275	ENSUAMG00000018924	DDX20	99	83.698	Ursus_americanus
ENSOCUG00000025939	DDX20	88	85.379	ENSUMAG00000013897	DDX20	92	85.379	Ursus_maritimus
ENSOCUG00000025939	DDX20	99	87.500	ENSVPAG00000010031	DDX20	99	86.286	Vicugna_pacos
ENSOCUG00000025939	DDX20	100	85.714	ENSVVUG00000016236	DDX20	99	84.896	Vulpes_vulpes
ENSOCUG00000025939	DDX20	94	56.675	ENSXETG00000013568	ddx20	100	56.352	Xenopus_tropicalis
ENSOCUG00000025939	DDX20	95	52.239	ENSXCOG00000007952	ddx20	97	52.795	Xiphophorus_couchianus
ENSOCUG00000025939	DDX20	95	52.363	ENSXMAG00000007573	ddx20	99	52.671	Xiphophorus_maculatus