EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000026486 (Gene tree)
Gene ID: 100328702
Gene Symbol: SF1
Alias: -
Full Name: Oryctolagus cuniculus splicing factor 1 (SF1)%2C mRNA.
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 10187 bases
Position: chrGL019294:43686-53872
Accession: NM_001171327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000025531	KH_1	PF00013.29	1.9e-07	1	1
ENSOCUP00000025531	zf-CCHC	PF00098.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000030391	-	1893	-	ENSOCUP00000025531	630 (aa)	-	G1U7X2

Gene Model

Click here to download ENSOCUG00000026486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000026486's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000026486	SF1	59	81.266	ENSAPOG00000012341	sf1	59	76.722	Acanthochromis_polyacanthus
ENSOCUG00000026486	SF1	100	91.913	ENSAMEG00000017828	SF1	83	100.000	Ailuropoda_melanoleuca
ENSOCUG00000026486	SF1	59	82.620	ENSACIG00000016514	sf1	61	78.780	Amphilophus_citrinellus
ENSOCUG00000026486	SF1	59	81.266	ENSAOCG00000010934	sf1	59	76.722	Amphiprion_ocellaris
ENSOCUG00000026486	SF1	59	81.266	ENSAPEG00000009498	sf1	59	76.722	Amphiprion_percula
ENSOCUG00000026486	SF1	59	82.105	ENSATEG00000001894	sf1	60	77.327	Anabas_testudineus
ENSOCUG00000026486	SF1	93	88.034	ENSANAG00000022607	-	99	86.455	Aotus_nancymaae
ENSOCUG00000026486	SF1	100	99.683	ENSANAG00000026664	-	99	99.683	Aotus_nancymaae
ENSOCUG00000026486	SF1	58	84.282	ENSACLG00000007633	sf1	60	78.729	Astatotilapia_calliptera
ENSOCUG00000026486	SF1	58	86.096	ENSAMXG00000003630	sf1	50	77.724	Astyanax_mexicanus
ENSOCUG00000026486	SF1	94	99.492	ENSBTAG00000001035	SF1	92	99.492	Bos_taurus
ENSOCUG00000026486	SF1	100	99.841	ENSCJAG00000002780	SF1	99	99.841	Callithrix_jacchus
ENSOCUG00000026486	SF1	100	99.841	ENSCAFG00000014239	SF1	99	99.841	Canis_familiaris
ENSOCUG00000026486	SF1	100	99.841	ENSCAFG00020014381	SF1	99	99.841	Canis_lupus_dingo
ENSOCUG00000026486	SF1	94	99.492	ENSCHIG00000025867	SF1	95	99.424	Capra_hircus
ENSOCUG00000026486	SF1	99	79.048	ENSCAPG00000010762	SF1	100	79.048	Cavia_aperea
ENSOCUG00000026486	SF1	99	99.681	ENSCPOG00000012290	SF1	100	99.681	Cavia_porcellus
ENSOCUG00000026486	SF1	100	99.841	ENSCCAG00000037881	SF1	99	99.841	Cebus_capucinus
ENSOCUG00000026486	SF1	89	85.080	ENSCCAG00000023781	-	93	82.752	Cebus_capucinus
ENSOCUG00000026486	SF1	100	99.841	ENSCATG00000011564	SF1	99	99.841	Cercocebus_atys
ENSOCUG00000026486	SF1	83	99.424	ENSCSAG00000007258	SF1	95	99.424	Chlorocebus_sabaeus
ENSOCUG00000026486	SF1	65	93.447	ENSCHOG00000006008	SF1	79	93.541	Choloepus_hoffmanni
ENSOCUG00000026486	SF1	82	86.486	ENSCPBG00000023763	SF1	66	85.135	Chrysemys_picta_bellii
ENSOCUG00000026486	SF1	60	58.115	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSOCUG00000026486	SF1	91	47.746	ENSCSAVG00000009055	-	56	66.667	Ciona_savignyi
ENSOCUG00000026486	SF1	100	99.841	ENSCANG00000042201	SF1	99	99.841	Colobus_angolensis_palliatus
ENSOCUG00000026486	SF1	99	95.342	ENSCGRG00001003677	Sf1	99	95.342	Cricetulus_griseus_chok1gshd
ENSOCUG00000026486	SF1	83	97.714	ENSCGRG00000001708	Sf1	97	97.714	Cricetulus_griseus_crigri
ENSOCUG00000026486	SF1	63	78.571	ENSCSEG00000014375	sf1	57	76.271	Cynoglossus_semilaevis
ENSOCUG00000026486	SF1	59	84.324	ENSCVAG00000001670	sf1	63	78.973	Cyprinodon_variegatus
ENSOCUG00000026486	SF1	62	81.013	ENSDARG00000008188	sf1	70	78.385	Danio_rerio
ENSOCUG00000026486	SF1	84	97.917	ENSDNOG00000001282	SF1	96	97.917	Dasypus_novemcinctus
ENSOCUG00000026486	SF1	100	99.683	ENSDORG00000016334	Sf1	99	99.683	Dipodomys_ordii
ENSOCUG00000026486	SF1	88	92.252	ENSETEG00000012830	SF1	82	91.453	Echinops_telfairi
ENSOCUG00000026486	SF1	83	99.040	ENSEASG00005018272	SF1	95	99.040	Equus_asinus_asinus
ENSOCUG00000026486	SF1	83	99.232	ENSECAG00000024544	SF1	95	99.232	Equus_caballus
ENSOCUG00000026486	SF1	62	99.237	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSOCUG00000026486	SF1	59	81.432	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSOCUG00000026486	SF1	100	99.841	ENSFCAG00000012231	SF1	99	99.841	Felis_catus
ENSOCUG00000026486	SF1	99	91.094	ENSFDAG00000009833	SF1	99	84.953	Fukomys_damarensis
ENSOCUG00000026486	SF1	59	82.058	ENSFHEG00000022656	sf1	59	77.251	Fundulus_heteroclitus
ENSOCUG00000026486	SF1	51	87.651	ENSGMOG00000007469	sf1	60	87.651	Gadus_morhua
ENSOCUG00000026486	SF1	59	83.598	ENSGAFG00000019284	sf1	76	79.412	Gambusia_affinis
ENSOCUG00000026486	SF1	72	89.011	ENSGAGG00000021691	SF1	72	85.135	Gopherus_agassizii
ENSOCUG00000026486	SF1	59	82.632	ENSHBUG00000011598	sf1	59	78.436	Haplochromis_burtoni
ENSOCUG00000026486	SF1	100	99.683	ENSHGLG00000009541	SF1	99	99.683	Heterocephalus_glaber_female
ENSOCUG00000026486	SF1	69	88.966	ENSHGLG00100008076	-	87	86.806	Heterocephalus_glaber_male
ENSOCUG00000026486	SF1	72	86.752	ENSHGLG00100008255	-	92	86.325	Heterocephalus_glaber_male
ENSOCUG00000026486	SF1	96	85.240	ENSHGLG00100013879	-	99	88.060	Heterocephalus_glaber_male
ENSOCUG00000026486	SF1	60	80.829	ENSHCOG00000011388	sf1	58	76.755	Hippocampus_comes
ENSOCUG00000026486	SF1	99	99.522	ENSSTOG00000009790	-	100	99.522	Ictidomys_tridecemlineatus
ENSOCUG00000026486	SF1	74	96.667	ENSSTOG00000024353	-	83	96.667	Ictidomys_tridecemlineatus
ENSOCUG00000026486	SF1	100	99.524	ENSJJAG00000011788	Sf1	99	99.524	Jaculus_jaculus
ENSOCUG00000026486	SF1	60	83.377	ENSKMAG00000005854	sf1	62	77.619	Kryptolebias_marmoratus
ENSOCUG00000026486	SF1	59	82.461	ENSLBEG00000019836	sf1	50	86.890	Labrus_bergylta
ENSOCUG00000026486	SF1	65	79.087	ENSLACG00000018493	SF1	74	78.554	Latimeria_chalumnae
ENSOCUG00000026486	SF1	59	84.759	ENSLOCG00000002130	sf1	59	79.803	Lepisosteus_oculatus
ENSOCUG00000026486	SF1	100	95.814	ENSLAFG00000007201	SF1	100	95.814	Loxodonta_africana
ENSOCUG00000026486	SF1	100	99.841	ENSMFAG00000033122	SF1	99	99.841	Macaca_fascicularis
ENSOCUG00000026486	SF1	100	99.841	ENSMMUG00000022606	SF1	99	99.841	Macaca_mulatta
ENSOCUG00000026486	SF1	100	95.692	ENSMNEG00000037901	SF1	99	95.692	Macaca_nemestrina
ENSOCUG00000026486	SF1	99	99.841	ENSMLEG00000040706	SF1	95	99.841	Mandrillus_leucophaeus
ENSOCUG00000026486	SF1	59	82.322	ENSMAMG00000001780	sf1	58	77.966	Mastacembelus_armatus
ENSOCUG00000026486	SF1	59	82.368	ENSMZEG00005009196	sf1	59	78.199	Maylandia_zebra
ENSOCUG00000026486	SF1	100	99.048	ENSMAUG00000014064	Sf1	99	99.048	Mesocricetus_auratus
ENSOCUG00000026486	SF1	100	99.524	ENSMICG00000001202	SF1	99	99.524	Microcebus_murinus
ENSOCUG00000026486	SF1	100	99.048	ENSMOCG00000022038	Sf1	99	99.048	Microtus_ochrogaster
ENSOCUG00000026486	SF1	59	81.720	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSOCUG00000026486	SF1	71	94.631	ENSMODG00000029407	SF1	97	94.631	Monodelphis_domestica
ENSOCUG00000026486	SF1	100	99.048	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSOCUG00000026486	SF1	100	99.048	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSOCUG00000026486	SF1	100	98.730	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSOCUG00000026486	SF1	100	99.048	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSOCUG00000026486	SF1	94	99.323	ENSMPUG00000012684	SF1	92	99.323	Mustela_putorius_furo
ENSOCUG00000026486	SF1	71	94.432	ENSMLUG00000029800	-	77	94.843	Myotis_lucifugus
ENSOCUG00000026486	SF1	94	99.323	ENSMLUG00000015217	-	92	99.323	Myotis_lucifugus
ENSOCUG00000026486	SF1	100	99.524	ENSNGAG00000005550	Sf1	99	99.524	Nannospalax_galili
ENSOCUG00000026486	SF1	59	83.690	ENSNBRG00000017606	sf1	60	78.729	Neolamprologus_brichardi
ENSOCUG00000026486	SF1	100	99.683	ENSNLEG00000005236	-	99	99.683	Nomascus_leucogenys
ENSOCUG00000026486	SF1	81	98.051	ENSMEUG00000013424	SF1	97	98.051	Notamacropus_eugenii
ENSOCUG00000026486	SF1	75	98.947	ENSOPRG00000005008	SF1	96	98.947	Ochotona_princeps
ENSOCUG00000026486	SF1	100	89.392	ENSODEG00000006102	-	99	87.520	Octodon_degus
ENSOCUG00000026486	SF1	59	82.632	ENSONIG00000015728	sf1	59	78.436	Oreochromis_niloticus
ENSOCUG00000026486	SF1	64	85.961	ENSOANG00000002909	SF1	96	87.724	Ornithorhynchus_anatinus
ENSOCUG00000026486	SF1	61	80.307	ENSORLG00000011853	sf1	58	76.499	Oryzias_latipes
ENSOCUG00000026486	SF1	61	80.307	ENSORLG00020011834	sf1	58	76.499	Oryzias_latipes_hni
ENSOCUG00000026486	SF1	59	80.105	ENSORLG00015012855	sf1	59	76.259	Oryzias_latipes_hsok
ENSOCUG00000026486	SF1	59	81.414	ENSOMEG00000005210	sf1	60	77.458	Oryzias_melastigma
ENSOCUG00000026486	SF1	100	99.683	ENSOGAG00000016196	SF1	99	99.683	Otolemur_garnettii
ENSOCUG00000026486	SF1	83	94.872	ENSOARG00000009166	SF1	80	99.782	Ovis_aries
ENSOCUG00000026486	SF1	100	96.508	ENSPPAG00000002799	-	99	96.508	Pan_paniscus
ENSOCUG00000026486	SF1	99	99.841	ENSPPRG00000013566	SF1	98	99.841	Panthera_pardus
ENSOCUG00000026486	SF1	70	98.871	ENSPTIG00000016141	SF1	80	98.871	Panthera_tigris_altaica
ENSOCUG00000026486	SF1	100	99.841	ENSPTRG00000003846	SF1	99	99.841	Pan_troglodytes
ENSOCUG00000026486	SF1	100	95.692	ENSPANG00000020754	SF1	99	95.692	Papio_anubis
ENSOCUG00000026486	SF1	52	79.580	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSOCUG00000026486	SF1	56	87.179	ENSPSIG00000003610	SF1	84	82.710	Pelodiscus_sinensis
ENSOCUG00000026486	SF1	100	99.206	ENSPEMG00000010463	Sf1	99	99.206	Peromyscus_maniculatus_bairdii
ENSOCUG00000026486	SF1	100	98.095	ENSPCIG00000018173	SF1	99	98.095	Phascolarctos_cinereus
ENSOCUG00000026486	SF1	59	85.445	ENSPFOG00000013683	sf1	66	80.779	Poecilia_formosa
ENSOCUG00000026486	SF1	59	83.862	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSOCUG00000026486	SF1	59	83.862	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSOCUG00000026486	SF1	59	83.333	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSOCUG00000026486	SF1	100	99.683	ENSPPYG00000003098	-	99	99.683	Pongo_abelii
ENSOCUG00000026486	SF1	83	98.099	ENSPCAG00000013631	SF1	78	98.099	Procavia_capensis
ENSOCUG00000026486	SF1	100	99.683	ENSPCOG00000027546	SF1	99	99.683	Propithecus_coquereli
ENSOCUG00000026486	SF1	83	97.909	ENSPVAG00000016938	SF1	79	97.909	Pteropus_vampyrus
ENSOCUG00000026486	SF1	59	82.368	ENSPNYG00000004673	sf1	59	78.199	Pundamilia_nyererei
ENSOCUG00000026486	SF1	59	85.185	ENSPNAG00000013072	sf1	59	78.846	Pygocentrus_nattereri
ENSOCUG00000026486	SF1	94	98.816	ENSRNOG00000021085	Sf1	92	98.816	Rattus_norvegicus
ENSOCUG00000026486	SF1	100	95.714	ENSRBIG00000042818	SF1	99	95.714	Rhinopithecus_bieti
ENSOCUG00000026486	SF1	99	87.580	ENSRROG00000045655	SF1	98	98.235	Rhinopithecus_roxellana
ENSOCUG00000026486	SF1	89	79.749	ENSSBOG00000022267	-	97	81.373	Saimiri_boliviensis_boliviensis
ENSOCUG00000026486	SF1	63	93.548	ENSSHAG00000006841	SF1	74	94.789	Sarcophilus_harrisii
ENSOCUG00000026486	SF1	63	80.299	ENSSFOG00015021978	sf1	55	75.418	Scleropages_formosus
ENSOCUG00000026486	SF1	65	76.112	ENSSMAG00000007549	sf1	63	76.291	Scophthalmus_maximus
ENSOCUG00000026486	SF1	59	80.577	ENSSDUG00000003903	sf1	62	76.905	Seriola_dumerili
ENSOCUG00000026486	SF1	59	80.577	ENSSLDG00000013075	sf1	60	76.905	Seriola_lalandi_dorsalis
ENSOCUG00000026486	SF1	82	95.551	ENSSARG00000008180	SF1	100	95.551	Sorex_araneus
ENSOCUG00000026486	SF1	80	82.759	ENSSPUG00000012907	SF1	76	85.033	Sphenodon_punctatus
ENSOCUG00000026486	SF1	59	81.266	ENSSPAG00000019060	sf1	58	76.998	Stegastes_partitus
ENSOCUG00000026486	SF1	100	99.683	ENSSSCG00000013021	SF1	99	99.683	Sus_scrofa
ENSOCUG00000026486	SF1	83	62.243	ENSTNIG00000004820	sf1	78	68.974	Tetraodon_nigroviridis
ENSOCUG00000026486	SF1	73	92.358	ENSTBEG00000013133	SF1	66	92.325	Tupaia_belangeri
ENSOCUG00000026486	SF1	82	94.981	ENSTTRG00000008857	SF1	96	95.349	Tursiops_truncatus
ENSOCUG00000026486	SF1	76	96.674	ENSUAMG00000011977	SF1	95	94.165	Ursus_americanus
ENSOCUG00000026486	SF1	76	99.771	ENSUMAG00000007268	SF1	89	99.768	Ursus_maritimus
ENSOCUG00000026486	SF1	56	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSOCUG00000026486	SF1	83	99.424	ENSVVUG00000028585	SF1	95	99.424	Vulpes_vulpes
ENSOCUG00000026486	SF1	93	69.717	ENSXETG00000008434	sf1	68	81.553	Xenopus_tropicalis
ENSOCUG00000026486	SF1	58	84.932	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSOCUG00000026486	SF1	59	83.113	ENSXMAG00000007822	sf1	61	79.426	Xiphophorus_maculatus