EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000026649 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein-like
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 1341 bases
Position: chr9:19959802-19961142
Accession: 100348318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000023090	TUDOR	PF00567.24	4.4e-05	1	1
ENSOCUP00000023090	SMN	PF06003.12	2.1e-107	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000025146	-	864	XM_008260803	ENSOCUP00000023090	288 (aa)	XP_008259025	G1U157

Gene Model

Click here to download ENSOCUG00000026649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000026649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000026649	-	99	84.281	ENSOCUG00000025183	-	99	80.602
ENSOCUG00000026649	-	99	97.203	ENSOCUG00000017097	-	99	97.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000026649	-	97	81.661	ENSG00000205571	SMN2	93	90.698	Homo_sapiens
ENSOCUG00000026649	-	97	81.661	ENSG00000172062	SMN1	94	88.406	Homo_sapiens
ENSOCUG00000026649	-	92	49.825	ENSAPOG00000011324	smn1	94	53.261	Acanthochromis_polyacanthus
ENSOCUG00000026649	-	96	84.561	ENSAMEG00000003316	-	96	81.633	Ailuropoda_melanoleuca
ENSOCUG00000026649	-	88	45.255	ENSACIG00000019772	-	97	50.189	Amphilophus_citrinellus
ENSOCUG00000026649	-	92	50.530	ENSAOCG00000024444	smn1	94	53.261	Amphiprion_ocellaris
ENSOCUG00000026649	-	92	50.530	ENSAPEG00000016504	smn1	94	53.261	Amphiprion_percula
ENSOCUG00000026649	-	89	50.182	ENSATEG00000002182	smn1	79	49.110	Anabas_testudineus
ENSOCUG00000026649	-	66	56.410	ENSAPLG00000010912	-	97	55.897	Anas_platyrhynchos
ENSOCUG00000026649	-	99	55.973	ENSACAG00000010017	-	100	58.703	Anolis_carolinensis
ENSOCUG00000026649	-	100	79.470	ENSANAG00000032133	-	100	77.152	Aotus_nancymaae
ENSOCUG00000026649	-	92	49.462	ENSACLG00000007308	smn1	90	50.534	Astatotilapia_calliptera
ENSOCUG00000026649	-	51	53.741	ENSAMXG00000013884	smn1	98	47.119	Astyanax_mexicanus
ENSOCUG00000026649	-	95	81.690	ENSBTAG00000005743	SMN2	99	79.863	Bos_taurus
ENSOCUG00000026649	-	97	80.690	ENSCJAG00000016290	-	94	88.406	Callithrix_jacchus
ENSOCUG00000026649	-	95	85.159	ENSCAFG00000007812	SMN	99	81.633	Canis_familiaris
ENSOCUG00000026649	-	96	84.859	ENSCAFG00020019229	-	93	81.356	Canis_lupus_dingo
ENSOCUG00000026649	-	95	81.818	ENSCHIG00000015559	-	99	79.070	Capra_hircus
ENSOCUG00000026649	-	98	83.162	ENSTSYG00000012058	-	93	89.231	Carlito_syrichta
ENSOCUG00000026649	-	74	68.349	ENSCAPG00000011021	-	83	71.123	Cavia_aperea
ENSOCUG00000026649	-	99	76.333	ENSCPOG00000012328	-	99	75.503	Cavia_porcellus
ENSOCUG00000026649	-	99	77.441	ENSCPOG00000036973	-	99	74.074	Cavia_porcellus
ENSOCUG00000026649	-	97	80.208	ENSCCAG00000018127	-	94	88.406	Cebus_capucinus
ENSOCUG00000026649	-	97	82.353	ENSCATG00000037002	-	94	88.406	Cercocebus_atys
ENSOCUG00000026649	-	99	78.114	ENSCLAG00000000284	-	99	75.421	Chinchilla_lanigera
ENSOCUG00000026649	-	97	81.315	ENSCSAG00000015688	-	100	80.333	Chlorocebus_sabaeus
ENSOCUG00000026649	-	86	73.152	ENSCHOG00000007346	-	77	96.296	Choloepus_hoffmanni
ENSOCUG00000026649	-	99	60.690	ENSCPBG00000010968	-	99	61.049	Chrysemys_picta_bellii
ENSOCUG00000026649	-	97	83.624	ENSCANG00000038242	-	94	88.406	Colobus_angolensis_palliatus
ENSOCUG00000026649	-	95	77.273	ENSCANG00000033324	-	96	70.890	Colobus_angolensis_palliatus
ENSOCUG00000026649	-	99	78.571	ENSCGRG00001017959	-	99	75.850	Cricetulus_griseus_chok1gshd
ENSOCUG00000026649	-	99	61.512	ENSCGRG00001016998	-	99	58.763	Cricetulus_griseus_chok1gshd
ENSOCUG00000026649	-	99	78.571	ENSCGRG00000007698	Smn1	99	75.850	Cricetulus_griseus_crigri
ENSOCUG00000026649	-	92	47.872	ENSCSEG00000015227	smn1	97	48.252	Cynoglossus_semilaevis
ENSOCUG00000026649	-	92	48.097	ENSCVAG00000007498	smn1	95	52.174	Cyprinodon_variegatus
ENSOCUG00000026649	-	94	46.599	ENSDARG00000018494	smn1	96	51.408	Danio_rerio
ENSOCUG00000026649	-	82	79.918	ENSDNOG00000007283	-	99	76.230	Dasypus_novemcinctus
ENSOCUG00000026649	-	78	64.807	ENSDNOG00000045949	-	81	66.162	Dasypus_novemcinctus
ENSOCUG00000026649	-	99	74.324	ENSDORG00000007082	Smn1	99	71.622	Dipodomys_ordii
ENSOCUG00000026649	-	74	68.545	ENSETEG00000001406	-	93	67.172	Echinops_telfairi
ENSOCUG00000026649	-	95	73.776	ENSEASG00005018000	-	97	68.858	Equus_asinus_asinus
ENSOCUG00000026649	-	95	83.158	ENSECAG00000015215	-	99	79.730	Equus_caballus
ENSOCUG00000026649	-	86	77.559	ENSEEUG00000015777	-	100	74.409	Erinaceus_europaeus
ENSOCUG00000026649	-	92	54.182	ENSELUG00000018067	smn1	94	53.480	Esox_lucius
ENSOCUG00000026649	-	99	82.712	ENSFCAG00000028292	SMN	99	80.000	Felis_catus
ENSOCUG00000026649	-	91	59.925	ENSFALG00000012320	-	95	59.925	Ficedula_albicollis
ENSOCUG00000026649	-	99	77.333	ENSFDAG00000017683	-	99	77.000	Fukomys_damarensis
ENSOCUG00000026649	-	91	49.097	ENSFHEG00000018508	smn1	96	52.000	Fundulus_heteroclitus
ENSOCUG00000026649	-	95	48.175	ENSGMOG00000017279	smn1	95	48.175	Gadus_morhua
ENSOCUG00000026649	-	92	61.049	ENSGALG00000002430	SMN	95	60.755	Gallus_gallus
ENSOCUG00000026649	-	92	51.613	ENSGAFG00000009501	smn1	94	51.812	Gambusia_affinis
ENSOCUG00000026649	-	92	49.097	ENSGACG00000010584	smn1	91	52.963	Gasterosteus_aculeatus
ENSOCUG00000026649	-	94	37.681	ENSGAGG00000013639	-	94	37.143	Gopherus_agassizii
ENSOCUG00000026649	-	98	58.803	ENSGAGG00000011374	-	99	59.028	Gopherus_agassizii
ENSOCUG00000026649	-	69	81.313	ENSGGOG00000026704	-	91	79.500	Gorilla_gorilla
ENSOCUG00000026649	-	94	73.260	ENSGGOG00000003872	-	100	72.263	Gorilla_gorilla
ENSOCUG00000026649	-	92	49.117	ENSHBUG00000013987	smn1	94	53.114	Haplochromis_burtoni
ENSOCUG00000026649	-	99	75.333	ENSHGLG00000001018	-	99	73.333	Heterocephalus_glaber_female
ENSOCUG00000026649	-	99	76.109	ENSHGLG00000001905	-	99	75.000	Heterocephalus_glaber_female
ENSOCUG00000026649	-	94	76.895	ENSHGLG00100018676	-	99	74.729	Heterocephalus_glaber_male
ENSOCUG00000026649	-	99	75.333	ENSHGLG00100011252	-	99	73.333	Heterocephalus_glaber_male
ENSOCUG00000026649	-	94	49.477	ENSHCOG00000017136	smn1	87	50.376	Hippocampus_comes
ENSOCUG00000026649	-	94	48.649	ENSIPUG00000012580	smn1	86	50.538	Ictalurus_punctatus
ENSOCUG00000026649	-	91	85.874	ENSSTOG00000012288	-	100	80.851	Ictidomys_tridecemlineatus
ENSOCUG00000026649	-	62	63.687	ENSJJAG00000014853	-	89	63.889	Jaculus_jaculus
ENSOCUG00000026649	-	92	47.518	ENSKMAG00000007239	smn1	96	50.936	Kryptolebias_marmoratus
ENSOCUG00000026649	-	92	49.650	ENSLBEG00000022550	smn1	94	53.008	Labrus_bergylta
ENSOCUG00000026649	-	92	34.035	ENSLACG00000009808	-	95	34.783	Latimeria_chalumnae
ENSOCUG00000026649	-	92	52.920	ENSLOCG00000011339	smn1	94	54.104	Lepisosteus_oculatus
ENSOCUG00000026649	-	99	81.208	ENSLAFG00000003425	-	96	78.188	Loxodonta_africana
ENSOCUG00000026649	-	97	83.045	ENSMFAG00000031523	SMN1	94	88.406	Macaca_fascicularis
ENSOCUG00000026649	-	97	78.893	ENSMFAG00000008812	-	100	76.667	Macaca_fascicularis
ENSOCUG00000026649	-	97	83.045	ENSMMUG00000020214	SMN1	94	88.406	Macaca_mulatta
ENSOCUG00000026649	-	97	78.201	ENSMMUG00000030594	-	100	76.000	Macaca_mulatta
ENSOCUG00000026649	-	74	71.875	ENSMNEG00000036423	-	80	73.913	Macaca_nemestrina
ENSOCUG00000026649	-	97	82.699	ENSMNEG00000035094	-	94	88.406	Macaca_nemestrina
ENSOCUG00000026649	-	100	83.278	ENSMLEG00000041902	-	94	86.957	Mandrillus_leucophaeus
ENSOCUG00000026649	-	92	52.265	ENSMAMG00000011034	smn1	94	53.405	Mastacembelus_armatus
ENSOCUG00000026649	-	92	49.296	ENSMZEG00005013634	smn1	94	51.056	Maylandia_zebra
ENSOCUG00000026649	-	66	59.162	ENSMGAG00000008889	-	95	58.730	Meleagris_gallopavo
ENSOCUG00000026649	-	99	77.551	ENSMAUG00000010262	Smn1	99	74.830	Mesocricetus_auratus
ENSOCUG00000026649	-	99	69.024	ENSMICG00000034708	-	89	90.769	Microcebus_murinus
ENSOCUG00000026649	-	99	75.170	ENSMOCG00000017833	Smn1	99	74.150	Microtus_ochrogaster
ENSOCUG00000026649	-	90	48.364	ENSMMOG00000005504	smn1	93	52.809	Mola_mola
ENSOCUG00000026649	-	99	68.621	ENSMODG00000001436	-	99	68.512	Monodelphis_domestica
ENSOCUG00000026649	-	92	49.123	ENSMALG00000008025	smn1	94	47.222	Monopterus_albus
ENSOCUG00000026649	-	99	77.288	MGP_CAROLIEiJ_G0018836	Smn1	99	74.576	Mus_caroli
ENSOCUG00000026649	-	99	77.288	ENSMUSG00000021645	Smn1	99	74.576	Mus_musculus
ENSOCUG00000026649	-	99	76.109	MGP_PahariEiJ_G0015911	Smn1	99	73.379	Mus_pahari
ENSOCUG00000026649	-	99	76.610	MGP_SPRETEiJ_G0019718	Smn1	99	73.898	Mus_spretus
ENSOCUG00000026649	-	94	85.053	ENSMPUG00000014470	-	98	82.206	Mustela_putorius_furo
ENSOCUG00000026649	-	96	82.253	ENSMLUG00000010603	-	96	78.878	Myotis_lucifugus
ENSOCUG00000026649	-	99	80.678	ENSNGAG00000019833	Smn1	99	80.339	Nannospalax_galili
ENSOCUG00000026649	-	92	49.477	ENSNBRG00000023000	smn1	94	53.986	Neolamprologus_brichardi
ENSOCUG00000026649	-	100	81.667	ENSNLEG00000004454	-	94	88.406	Nomascus_leucogenys
ENSOCUG00000026649	-	77	63.158	ENSMEUG00000011393	-	99	63.556	Notamacropus_eugenii
ENSOCUG00000026649	-	86	77.132	ENSOPRG00000002015	-	99	72.308	Ochotona_princeps
ENSOCUG00000026649	-	94	78.571	ENSODEG00000015976	-	96	72.695	Octodon_degus
ENSOCUG00000026649	-	92	49.655	ENSONIG00000011799	smn1	95	54.874	Oreochromis_niloticus
ENSOCUG00000026649	-	94	66.300	ENSOANG00000001626	-	97	67.399	Ornithorhynchus_anatinus
ENSOCUG00000026649	-	92	52.669	ENSORLG00000010552	smn1	94	51.812	Oryzias_latipes
ENSOCUG00000026649	-	92	53.184	ENSORLG00020007936	smn1	93	51.504	Oryzias_latipes_hni
ENSOCUG00000026649	-	56	57.407	ENSORLG00015022425	smn1	94	51.246	Oryzias_latipes_hsok
ENSOCUG00000026649	-	92	52.837	ENSOMEG00000007824	smn1	94	52.347	Oryzias_melastigma
ENSOCUG00000026649	-	91	73.358	ENSOGAG00000031414	-	96	72.598	Otolemur_garnettii
ENSOCUG00000026649	-	94	79.211	ENSOARG00000005425	-	99	78.495	Ovis_aries
ENSOCUG00000026649	-	97	81.315	ENSPPAG00000036640	-	94	88.406	Pan_paniscus
ENSOCUG00000026649	-	99	83.051	ENSPPRG00000005575	-	99	80.339	Panthera_pardus
ENSOCUG00000026649	-	99	82.770	ENSPTIG00000007745	-	99	80.068	Panthera_tigris_altaica
ENSOCUG00000026649	-	97	80.822	ENSPTRG00000016955	-	94	88.406	Pan_troglodytes
ENSOCUG00000026649	-	100	83.000	ENSPANG00000013601	-	94	88.406	Papio_anubis
ENSOCUG00000026649	-	95	79.505	ENSPANG00000000253	-	98	76.871	Papio_anubis
ENSOCUG00000026649	-	94	51.399	ENSPKIG00000011096	smn1	97	50.178	Paramormyrops_kingsleyae
ENSOCUG00000026649	-	93	57.951	ENSPSIG00000014787	-	90	57.597	Pelodiscus_sinensis
ENSOCUG00000026649	-	92	50.365	ENSPMGG00000012285	smn1	94	49.811	Periophthalmus_magnuspinnatus
ENSOCUG00000026649	-	92	41.877	ENSPMAG00000005004	smn1	99	37.919	Petromyzon_marinus
ENSOCUG00000026649	-	99	68.276	ENSPCIG00000025764	-	99	68.641	Phascolarctos_cinereus
ENSOCUG00000026649	-	92	51.613	ENSPFOG00000007786	smn1	94	52.174	Poecilia_formosa
ENSOCUG00000026649	-	92	51.971	ENSPLAG00000012071	smn1	94	52.536	Poecilia_latipinna
ENSOCUG00000026649	-	92	51.613	ENSPMEG00000017085	smn1	94	52.174	Poecilia_mexicana
ENSOCUG00000026649	-	92	52.688	ENSPREG00000005824	smn1	94	52.536	Poecilia_reticulata
ENSOCUG00000026649	-	85	58.130	ENSPPYG00000019189	-	99	53.659	Pongo_abelii
ENSOCUG00000026649	-	92	80.727	ENSPPYG00000015533	-	97	78.182	Pongo_abelii
ENSOCUG00000026649	-	91	77.206	ENSPCAG00000004187	-	99	76.471	Procavia_capensis
ENSOCUG00000026649	-	89	66.284	ENSPCOG00000022307	-	99	64.925	Propithecus_coquereli
ENSOCUG00000026649	-	95	86.219	ENSPVAG00000005977	-	99	81.973	Pteropus_vampyrus
ENSOCUG00000026649	-	92	49.477	ENSPNYG00000014148	smn1	94	53.986	Pundamilia_nyererei
ENSOCUG00000026649	-	99	46.254	ENSPNAG00000014007	smn1	86	49.123	Pygocentrus_nattereri
ENSOCUG00000026649	-	99	75.932	ENSRNOG00000018067	Smn1	99	73.559	Rattus_norvegicus
ENSOCUG00000026649	-	96	72.340	ENSRBIG00000036775	-	97	69.611	Rhinopithecus_bieti
ENSOCUG00000026649	-	97	83.045	ENSRBIG00000037052	-	94	88.406	Rhinopithecus_bieti
ENSOCUG00000026649	-	100	70.447	ENSRROG00000031088	-	100	67.010	Rhinopithecus_roxellana
ENSOCUG00000026649	-	97	83.045	ENSRROG00000039399	-	94	88.406	Rhinopithecus_roxellana
ENSOCUG00000026649	-	83	74.609	ENSSBOG00000020112	-	87	71.875	Saimiri_boliviensis_boliviensis
ENSOCUG00000026649	-	97	81.119	ENSSBOG00000011665	-	94	86.957	Saimiri_boliviensis_boliviensis
ENSOCUG00000026649	-	99	68.942	ENSSHAG00000001499	-	99	67.033	Sarcophilus_harrisii
ENSOCUG00000026649	-	92	49.638	ENSSFOG00015015507	smn1	94	51.636	Scleropages_formosus
ENSOCUG00000026649	-	92	45.907	ENSSMAG00000007922	smn1	94	53.623	Scophthalmus_maximus
ENSOCUG00000026649	-	92	50.000	ENSSDUG00000018533	smn1	94	49.827	Seriola_dumerili
ENSOCUG00000026649	-	92	50.347	ENSSLDG00000021135	smn1	94	50.173	Seriola_lalandi_dorsalis
ENSOCUG00000026649	-	97	61.210	ENSSPUG00000000373	-	96	60.000	Sphenodon_punctatus
ENSOCUG00000026649	-	92	52.030	ENSSPAG00000004345	smn1	94	52.899	Stegastes_partitus
ENSOCUG00000026649	-	70	59.606	ENSSSCG00000033865	-	90	60.513	Sus_scrofa
ENSOCUG00000026649	-	95	83.451	ENSSSCG00000016970	-	99	80.808	Sus_scrofa
ENSOCUG00000026649	-	96	64.260	ENSSSCG00000029127	-	96	65.480	Sus_scrofa
ENSOCUG00000026649	-	93	57.500	ENSTGUG00000001548	-	99	55.208	Taeniopygia_guttata
ENSOCUG00000026649	-	58	54.167	ENSTRUG00000000736	smn	95	46.324	Takifugu_rubripes
ENSOCUG00000026649	-	93	45.070	ENSTNIG00000009892	smn1	95	49.110	Tetraodon_nigroviridis
ENSOCUG00000026649	-	69	83.333	ENSTBEG00000002399	-	93	83.333	Tupaia_belangeri
ENSOCUG00000026649	-	96	83.688	ENSTTRG00000005080	-	99	82.034	Tursiops_truncatus
ENSOCUG00000026649	-	66	85.185	ENSUAMG00000024947	-	70	80.808	Ursus_americanus
ENSOCUG00000026649	-	96	85.263	ENSUMAG00000007842	-	74	82.313	Ursus_maritimus
ENSOCUG00000026649	-	91	70.849	ENSVPAG00000009887	-	100	67.845	Vicugna_pacos
ENSOCUG00000026649	-	95	85.159	ENSVVUG00000006934	-	99	81.633	Vulpes_vulpes
ENSOCUG00000026649	-	90	35.689	ENSXETG00000004912	-	98	32.890	Xenopus_tropicalis
ENSOCUG00000026649	-	97	54.930	ENSXETG00000018189	smn2	99	53.242	Xenopus_tropicalis
ENSOCUG00000026649	-	93	49.455	ENSXMAG00000001521	smn1	95	52.158	Xiphophorus_maculatus