EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000026813 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 702 bases
Position: chr14:42689245-42689946
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000016027	LSM	PF01423.22	6.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000026804	-	684	-	ENSOCUP00000016027	227 (aa)	-	G1TGH7

Gene Model

Click here to download ENSOCUG00000026813's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000026813's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000026813	-	70	70.732	ENSOCUG00000003532	-	88	66.038
ENSOCUG00000026813	-	63	70.946	ENSOCUG00000014042	-	89	72.300
ENSOCUG00000026813	-	90	71.090	ENSOCUG00000021456	-	88	71.090
ENSOCUG00000026813	-	63	70.270	ENSOCUG00000028215	-	88	72.038
ENSOCUG00000026813	-	72	70.659	ENSOCUG00000022423	-	86	64.072

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000026813	-	63	70.946	ENSG00000125835	SNRPB	92	71.831	Homo_sapiens
ENSOCUG00000026813	-	77	63.483	ENSAPOG00000019606	snrpb	72	64.953	Acanthochromis_polyacanthus
ENSOCUG00000026813	-	71	72.289	ENSAMEG00000011353	SNRPB	88	71.628	Ailuropoda_melanoleuca
ENSOCUG00000026813	-	75	62.644	ENSACIG00000014480	snrpb	92	64.286	Amphilophus_citrinellus
ENSOCUG00000026813	-	77	63.483	ENSAOCG00000006876	snrpb	88	64.953	Amphiprion_ocellaris
ENSOCUG00000026813	-	77	63.483	ENSAPEG00000021585	snrpb	91	64.953	Amphiprion_percula
ENSOCUG00000026813	-	77	64.045	ENSATEG00000009836	snrpb	88	64.953	Anabas_testudineus
ENSOCUG00000026813	-	60	66.667	ENSACAG00000002053	SNRPB	89	67.961	Anolis_carolinensis
ENSOCUG00000026813	-	65	69.737	ENSANAG00000020364	-	54	63.850	Aotus_nancymaae
ENSOCUG00000026813	-	70	67.683	ENSANAG00000036271	-	85	68.246	Aotus_nancymaae
ENSOCUG00000026813	-	63	70.946	ENSANAG00000024443	-	92	71.831	Aotus_nancymaae
ENSOCUG00000026813	-	77	63.483	ENSACLG00000014707	snrpb	88	64.953	Astatotilapia_calliptera
ENSOCUG00000026813	-	63	66.216	ENSAMXG00000029434	snrpb	89	66.197	Astyanax_mexicanus
ENSOCUG00000026813	-	88	68.447	ENSBTAG00000001038	SNRPB	91	72.986	Bos_taurus
ENSOCUG00000026813	-	63	70.946	ENSCJAG00000020971	-	92	71.831	Callithrix_jacchus
ENSOCUG00000026813	-	90	69.194	ENSCJAG00000023097	-	88	69.194	Callithrix_jacchus
ENSOCUG00000026813	-	64	62.914	ENSCAFG00000031109	-	84	61.881	Canis_familiaris
ENSOCUG00000026813	-	63	70.946	ENSCAFG00000006693	-	92	71.831	Canis_familiaris
ENSOCUG00000026813	-	63	70.946	ENSCAFG00020016981	-	89	71.831	Canis_lupus_dingo
ENSOCUG00000026813	-	63	70.946	ENSCHIG00000025449	-	91	72.986	Capra_hircus
ENSOCUG00000026813	-	63	70.946	ENSTSYG00000014498	-	92	71.831	Carlito_syrichta
ENSOCUG00000026813	-	78	57.062	ENSTSYG00000032303	-	78	59.420	Carlito_syrichta
ENSOCUG00000026813	-	64	70.667	ENSCAPG00000012669	SNRPB	93	71.831	Cavia_aperea
ENSOCUG00000026813	-	63	70.946	ENSCPOG00000039408	SNRPB	92	71.831	Cavia_porcellus
ENSOCUG00000026813	-	63	70.946	ENSCCAG00000026002	SNRPB	92	71.831	Cebus_capucinus
ENSOCUG00000026813	-	88	57.635	ENSCCAG00000035140	-	75	65.116	Cebus_capucinus
ENSOCUG00000026813	-	71	71.687	ENSCATG00000030230	SNRPB	92	71.831	Cercocebus_atys
ENSOCUG00000026813	-	63	70.946	ENSCLAG00000012442	SNRPB	90	71.831	Chinchilla_lanigera
ENSOCUG00000026813	-	63	70.946	ENSCSAG00000010840	SNRPB	92	71.831	Chlorocebus_sabaeus
ENSOCUG00000026813	-	63	67.568	ENSCPBG00000026801	SNRPB	93	69.014	Chrysemys_picta_bellii
ENSOCUG00000026813	-	63	70.946	ENSCANG00000019461	SNRPB	92	71.831	Colobus_angolensis_palliatus
ENSOCUG00000026813	-	69	72.050	ENSCGRG00001023046	Snrpb	92	71.831	Cricetulus_griseus_chok1gshd
ENSOCUG00000026813	-	69	72.050	ENSCGRG00000010423	Snrpb	91	72.549	Cricetulus_griseus_crigri
ENSOCUG00000026813	-	78	63.889	ENSCSEG00000020328	snrpb	88	65.566	Cynoglossus_semilaevis
ENSOCUG00000026813	-	63	66.892	ENSDARG00000011125	snrpb	88	66.197	Danio_rerio
ENSOCUG00000026813	-	63	70.946	ENSDNOG00000015545	-	89	71.831	Dasypus_novemcinctus
ENSOCUG00000026813	-	63	67.568	ENSDNOG00000007896	-	87	70.142	Dasypus_novemcinctus
ENSOCUG00000026813	-	62	70.139	ENSDORG00000029558	Snrpb	91	71.770	Dipodomys_ordii
ENSOCUG00000026813	-	63	51.701	FBgn0262601	SmB	72	52.055	Drosophila_melanogaster
ENSOCUG00000026813	-	80	52.151	ENSETEG00000006830	SNRPB	93	58.294	Echinops_telfairi
ENSOCUG00000026813	-	63	61.905	ENSEBUG00000007467	SNRPB	88	55.000	Eptatretus_burgeri
ENSOCUG00000026813	-	63	70.270	ENSEASG00005012991	SNRPB	91	72.038	Equus_asinus_asinus
ENSOCUG00000026813	-	70	72.561	ENSECAG00000011944	SNRPB	92	71.831	Equus_caballus
ENSOCUG00000026813	-	70	72.561	ENSEEUG00000015568	SNRPB	74	72.512	Erinaceus_europaeus
ENSOCUG00000026813	-	61	65.734	ENSELUG00000014564	snrpb	92	63.942	Esox_lucius
ENSOCUG00000026813	-	63	70.946	ENSFCAG00000034090	-	92	71.831	Felis_catus
ENSOCUG00000026813	-	60	67.376	ENSFALG00000004866	SNRPB	89	68.447	Ficedula_albicollis
ENSOCUG00000026813	-	64	70.000	ENSFDAG00000009937	SNRPB	92	71.831	Fukomys_damarensis
ENSOCUG00000026813	-	63	67.568	ENSGALG00000035421	SNRPN	89	68.545	Gallus_gallus
ENSOCUG00000026813	-	64	66.443	ENSGAFG00000019558	snrpb	93	61.860	Gambusia_affinis
ENSOCUG00000026813	-	63	66.892	ENSGACG00000003262	snrpb	88	64.623	Gasterosteus_aculeatus
ENSOCUG00000026813	-	63	67.568	ENSGAGG00000001308	SNRPB	89	69.014	Gopherus_agassizii
ENSOCUG00000026813	-	63	70.946	ENSGGOG00000016138	SNRPB	92	71.831	Gorilla_gorilla
ENSOCUG00000026813	-	77	63.483	ENSHBUG00000008369	snrpb	88	64.953	Haplochromis_burtoni
ENSOCUG00000026813	-	63	70.946	ENSHGLG00000016241	-	92	71.831	Heterocephalus_glaber_female
ENSOCUG00000026813	-	64	65.772	ENSHGLG00000016505	-	93	60.591	Heterocephalus_glaber_female
ENSOCUG00000026813	-	63	70.946	ENSHGLG00100012877	-	92	71.831	Heterocephalus_glaber_male
ENSOCUG00000026813	-	64	65.772	ENSHGLG00100004178	-	93	60.591	Heterocephalus_glaber_male
ENSOCUG00000026813	-	78	63.889	ENSHCOG00000014888	snrpb	88	65.566	Hippocampus_comes
ENSOCUG00000026813	-	63	66.892	ENSIPUG00000024569	SNRPB	89	66.197	Ictalurus_punctatus
ENSOCUG00000026813	-	63	68.919	ENSSTOG00000033664	-	89	69.953	Ictidomys_tridecemlineatus
ENSOCUG00000026813	-	67	63.871	ENSSTOG00000027821	-	87	56.039	Ictidomys_tridecemlineatus
ENSOCUG00000026813	-	63	70.946	ENSJJAG00000024170	Snrpb	92	71.831	Jaculus_jaculus
ENSOCUG00000026813	-	63	67.568	ENSKMAG00000014494	snrpb	87	64.486	Kryptolebias_marmoratus
ENSOCUG00000026813	-	78	63.889	ENSLBEG00000005678	snrpb	88	65.566	Labrus_bergylta
ENSOCUG00000026813	-	78	64.641	ENSLACG00000011459	SNRPB	89	65.728	Latimeria_chalumnae
ENSOCUG00000026813	-	63	67.568	ENSLOCG00000002687	snrpb	89	66.667	Lepisosteus_oculatus
ENSOCUG00000026813	-	64	67.333	ENSLAFG00000017588	SNRPB	93	69.767	Loxodonta_africana
ENSOCUG00000026813	-	70	71.605	ENSMFAG00000038756	SNRPB	92	71.831	Macaca_fascicularis
ENSOCUG00000026813	-	70	71.605	ENSMMUG00000010050	SNRPB	92	71.831	Macaca_mulatta
ENSOCUG00000026813	-	70	71.605	ENSMNEG00000027954	SNRPB	92	71.831	Macaca_nemestrina
ENSOCUG00000026813	-	63	70.946	ENSMLEG00000022346	SNRPB	92	71.831	Mandrillus_leucophaeus
ENSOCUG00000026813	-	78	63.333	ENSMAMG00000009294	snrpb	87	64.815	Mastacembelus_armatus
ENSOCUG00000026813	-	77	63.483	ENSMZEG00005011856	snrpb	88	64.953	Maylandia_zebra
ENSOCUG00000026813	-	77	66.480	ENSMICG00000015983	-	94	67.647	Microcebus_murinus
ENSOCUG00000026813	-	63	70.946	ENSMICG00000016519	SNRPB	91	72.986	Microcebus_murinus
ENSOCUG00000026813	-	59	57.664	ENSMOCG00000021362	-	90	57.346	Microtus_ochrogaster
ENSOCUG00000026813	-	63	70.270	ENSMOCG00000002892	-	91	72.038	Microtus_ochrogaster
ENSOCUG00000026813	-	78	63.736	ENSMMOG00000013226	snrpb	90	66.038	Mola_mola
ENSOCUG00000026813	-	77	62.921	ENSMALG00000020839	snrpb	72	64.953	Monopterus_albus
ENSOCUG00000026813	-	63	70.946	MGP_CAROLIEiJ_G0024293	Snrpb	92	71.831	Mus_caroli
ENSOCUG00000026813	-	63	70.946	ENSMUSG00000027404	Snrpb	92	71.831	Mus_musculus
ENSOCUG00000026813	-	63	70.946	MGP_PahariEiJ_G0025738	Snrpb	92	71.831	Mus_pahari
ENSOCUG00000026813	-	63	70.946	MGP_SPRETEiJ_G0025213	Snrpb	92	71.831	Mus_spretus
ENSOCUG00000026813	-	63	70.946	ENSMPUG00000009283	SNRPB	92	71.831	Mustela_putorius_furo
ENSOCUG00000026813	-	63	66.892	ENSMLUG00000016951	SNRPB	89	69.484	Myotis_lucifugus
ENSOCUG00000026813	-	63	70.946	ENSNGAG00000012051	Snrpb	92	71.831	Nannospalax_galili
ENSOCUG00000026813	-	76	61.932	ENSNBRG00000006353	snrpb	80	64.286	Neolamprologus_brichardi
ENSOCUG00000026813	-	71	71.687	ENSNLEG00000029067	SNRPB	90	71.831	Nomascus_leucogenys
ENSOCUG00000026813	-	63	69.595	ENSMEUG00000015625	SNRPB	95	70.423	Notamacropus_eugenii
ENSOCUG00000026813	-	63	64.189	ENSODEG00000016060	-	89	69.194	Octodon_degus
ENSOCUG00000026813	-	63	70.946	ENSODEG00000004305	-	92	71.831	Octodon_degus
ENSOCUG00000026813	-	77	63.483	ENSONIG00000000248	snrpb	88	64.953	Oreochromis_niloticus
ENSOCUG00000026813	-	78	62.778	ENSORLG00000021862	snrpb	88	64.486	Oryzias_latipes
ENSOCUG00000026813	-	63	70.946	ENSOGAG00000016149	SNRPB	89	71.831	Otolemur_garnettii
ENSOCUG00000026813	-	63	70.946	ENSOARG00000006740	SNRPB	91	72.986	Ovis_aries
ENSOCUG00000026813	-	63	70.946	ENSPPAG00000036314	SNRPB	92	71.831	Pan_paniscus
ENSOCUG00000026813	-	63	70.946	ENSPPRG00000003233	-	92	71.831	Panthera_pardus
ENSOCUG00000026813	-	63	70.946	ENSPTIG00000007468	SNRPB	92	71.831	Panthera_tigris_altaica
ENSOCUG00000026813	-	63	70.946	ENSPTRG00000013176	SNRPB	92	71.831	Pan_troglodytes
ENSOCUG00000026813	-	71	72.289	ENSPANG00000020362	SNRPB	89	71.831	Papio_anubis
ENSOCUG00000026813	-	63	66.892	ENSPKIG00000002865	snrpb	89	65.728	Paramormyrops_kingsleyae
ENSOCUG00000026813	-	64	67.333	ENSPSIG00000014125	SNRPB	88	68.837	Pelodiscus_sinensis
ENSOCUG00000026813	-	76	61.017	ENSPMGG00000016349	snrpb	88	61.353	Periophthalmus_magnuspinnatus
ENSOCUG00000026813	-	63	70.946	ENSPEMG00000007948	Snrpb	92	71.831	Peromyscus_maniculatus_bairdii
ENSOCUG00000026813	-	63	69.595	ENSPCIG00000004694	SNRPB	88	69.953	Phascolarctos_cinereus
ENSOCUG00000026813	-	64	66.667	ENSPFOG00000011802	snrpb	88	56.444	Poecilia_formosa
ENSOCUG00000026813	-	67	58.710	ENSPLAG00000014130	snrpb	87	53.555	Poecilia_latipinna
ENSOCUG00000026813	-	58	64.444	ENSPREG00000015515	snrpb	62	64.444	Poecilia_reticulata
ENSOCUG00000026813	-	63	70.946	ENSPPYG00000010841	SNRPB	92	71.831	Pongo_abelii
ENSOCUG00000026813	-	63	70.946	ENSPCOG00000013686	SNRPB	92	71.831	Propithecus_coquereli
ENSOCUG00000026813	-	70	71.341	ENSPVAG00000017013	SNRPB	74	71.564	Pteropus_vampyrus
ENSOCUG00000026813	-	77	63.483	ENSPNYG00000014788	snrpb	88	64.953	Pundamilia_nyererei
ENSOCUG00000026813	-	63	66.892	ENSPNAG00000016126	snrpb	89	66.667	Pygocentrus_nattereri
ENSOCUG00000026813	-	63	70.946	ENSRNOG00000006961	Snrpb	92	71.831	Rattus_norvegicus
ENSOCUG00000026813	-	63	70.946	ENSRBIG00000040505	SNRPB	91	71.905	Rhinopithecus_bieti
ENSOCUG00000026813	-	63	70.946	ENSRROG00000036094	SNRPB	92	71.831	Rhinopithecus_roxellana
ENSOCUG00000026813	-	63	70.946	ENSSBOG00000027310	SNRPB	92	71.831	Saimiri_boliviensis_boliviensis
ENSOCUG00000026813	-	63	70.270	ENSSHAG00000010394	SNRPB	89	70.423	Sarcophilus_harrisii
ENSOCUG00000026813	-	63	66.216	ENSSFOG00015002870	snrpb	89	65.258	Scleropages_formosus
ENSOCUG00000026813	-	78	64.444	ENSSMAG00000006766	snrpb	88	65.094	Scophthalmus_maximus
ENSOCUG00000026813	-	77	63.483	ENSSDUG00000018539	snrpb	88	64.953	Seriola_dumerili
ENSOCUG00000026813	-	77	63.483	ENSSLDG00000022391	snrpb	88	64.953	Seriola_lalandi_dorsalis
ENSOCUG00000026813	-	63	56.081	ENSSARG00000003084	SNRPB	91	61.502	Sorex_araneus
ENSOCUG00000026813	-	63	67.568	ENSSPUG00000015659	SNRPB	89	69.014	Sphenodon_punctatus
ENSOCUG00000026813	-	77	63.483	ENSSPAG00000021992	snrpb	88	64.953	Stegastes_partitus
ENSOCUG00000026813	-	64	70.667	ENSSSCG00000040857	-	91	72.986	Sus_scrofa
ENSOCUG00000026813	-	63	63.194	ENSSSCG00000011966	-	90	62.802	Sus_scrofa
ENSOCUG00000026813	-	72	57.988	ENSTGUG00000005684	SNRPB	88	52.423	Taeniopygia_guttata
ENSOCUG00000026813	-	78	63.889	ENSTRUG00000023094	snrpb	92	65.094	Takifugu_rubripes
ENSOCUG00000026813	-	78	63.889	ENSTNIG00000002991	snrpb	88	65.094	Tetraodon_nigroviridis
ENSOCUG00000026813	-	70	72.561	ENSUAMG00000005984	-	87	71.271	Ursus_americanus
ENSOCUG00000026813	-	90	53.110	ENSUMAG00000002123	-	90	56.338	Ursus_maritimus
ENSOCUG00000026813	-	63	70.270	ENSVVUG00000025654	-	89	71.362	Vulpes_vulpes
ENSOCUG00000026813	-	99	57.826	ENSVVUG00000010086	-	92	58.294	Vulpes_vulpes
ENSOCUG00000026813	-	71	69.697	ENSXETG00000027266	snrpb	90	69.014	Xenopus_tropicalis
ENSOCUG00000026813	-	67	58.710	ENSXMAG00000028767	snrpb	86	51.818	Xiphophorus_maculatus