EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000026856 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 1990 bases
Position: chr2:18660962-18662951
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000017530	RRM_1	PF00076.22	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000030717	-	513	-	ENSOCUP00000017530	171 (aa)	-	G1TKP4

Gene Model

Click here to download ENSOCUG00000026856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000026856's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000026856	-	87	51.299	ENSOCUG00000024603	SRSF9	70	46.154
ENSOCUG00000026856	-	95	47.368	ENSOCUG00000010894	-	66	47.853

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000026856	-	96	56.069	ENSACIG00000002623	-	91	54.335	Amphilophus_citrinellus
ENSOCUG00000026856	-	95	55.357	ENSACLG00000005676	-	68	54.819	Astatotilapia_calliptera
ENSOCUG00000026856	-	96	53.333	ENSACLG00000021693	-	72	51.667	Astatotilapia_calliptera
ENSOCUG00000026856	-	91	39.766	WBGene00004700	rsp-3	66	41.520	Caenorhabditis_elegans
ENSOCUG00000026856	-	89	49.057	ENSCING00000007375	-	66	46.154	Ciona_intestinalis
ENSOCUG00000026856	-	89	49.359	ENSCSAVG00000006093	-	79	46.795	Ciona_savignyi
ENSOCUG00000026856	-	91	39.759	FBgn0283477	SF2	64	38.182	Drosophila_melanogaster
ENSOCUG00000026856	-	92	50.307	ENSEBUG00000009582	-	70	49.080	Eptatretus_burgeri
ENSOCUG00000026856	-	96	50.000	ENSFHEG00000017425	-	93	50.000	Fundulus_heteroclitus
ENSOCUG00000026856	-	96	53.488	ENSGMOG00000010606	-	91	54.118	Gadus_morhua
ENSOCUG00000026856	-	96	50.279	ENSGAFG00000000609	-	71	50.282	Gambusia_affinis
ENSOCUG00000026856	-	100	51.685	ENSGAFG00000012721	-	68	55.689	Gambusia_affinis
ENSOCUG00000026856	-	95	53.846	ENSGACG00000011094	-	90	55.689	Gasterosteus_aculeatus
ENSOCUG00000026856	-	96	54.190	ENSHBUG00000015576	-	72	52.514	Haplochromis_burtoni
ENSOCUG00000026856	-	70	38.333	ENSHBUG00000015600	-	65	38.272	Haplochromis_burtoni
ENSOCUG00000026856	-	97	51.163	ENSHCOG00000008016	-	69	49.412	Hippocampus_comes
ENSOCUG00000026856	-	100	57.303	ENSMFAG00000034223	-	60	55.618	Macaca_fascicularis
ENSOCUG00000026856	-	95	55.357	ENSMZEG00005007947	-	68	54.819	Maylandia_zebra
ENSOCUG00000026856	-	96	54.494	ENSMZEG00005019071	-	92	54.023	Maylandia_zebra
ENSOCUG00000026856	-	96	52.874	ENSMMOG00000018849	-	70	52.326	Mola_mola
ENSOCUG00000026856	-	96	56.627	ENSNBRG00000008134	-	67	54.819	Neolamprologus_brichardi
ENSOCUG00000026856	-	95	55.357	ENSNBRG00000019981	-	68	54.819	Neolamprologus_brichardi
ENSOCUG00000026856	-	94	49.080	ENSOPRG00000004745	-	98	48.466	Ochotona_princeps
ENSOCUG00000026856	-	97	53.297	ENSONIG00000004857	-	72	51.099	Oreochromis_niloticus
ENSOCUG00000026856	-	96	54.913	ENSORLG00000005314	-	69	53.179	Oryzias_latipes
ENSOCUG00000026856	-	96	54.913	ENSORLG00015015497	-	69	53.179	Oryzias_latipes_hsok
ENSOCUG00000026856	-	96	54.494	ENSOMEG00000017711	-	70	52.247	Oryzias_melastigma
ENSOCUG00000026856	-	95	53.529	ENSPLAG00000019613	-	67	55.689	Poecilia_latipinna
ENSOCUG00000026856	-	95	53.846	ENSPLAG00000019553	-	84	55.689	Poecilia_latipinna
ENSOCUG00000026856	-	96	50.847	ENSPREG00000016792	-	71	50.857	Poecilia_reticulata
ENSOCUG00000026856	-	96	53.333	ENSPNYG00000020651	-	69	51.667	Pundamilia_nyererei
ENSOCUG00000026856	-	95	55.357	ENSPNYG00000017115	-	68	54.819	Pundamilia_nyererei
ENSOCUG00000026856	-	97	55.747	ENSSFOG00015004989	-	63	55.814	Scleropages_formosus
ENSOCUG00000026856	-	97	50.000	ENSSDUG00000003887	-	68	52.695	Seriola_dumerili
ENSOCUG00000026856	-	96	50.898	ENSTRUG00000017058	-	70	51.497	Takifugu_rubripes
ENSOCUG00000026856	-	97	50.595	ENSTNIG00000009993	-	71	50.000	Tetraodon_nigroviridis
ENSOCUG00000026856	-	96	53.216	ENSXCOG00000017888	-	69	52.410	Xiphophorus_couchianus
ENSOCUG00000026856	-	95	53.846	ENSXCOG00000009643	-	68	55.828	Xiphophorus_couchianus
ENSOCUG00000026856	-	96	50.562	ENSXMAG00000010797	-	71	50.568	Xiphophorus_maculatus