EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000027419 (Gene tree)
Gene ID: 100351745
Gene Symbol: -
Alias: -
Full Name: 28S ribosomal protein S17%2C mitochondrial
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 393 bases
Position: chr7:148161309-148161701
Accession: 100351745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000019518	Ribosomal_S17	PF00366.20	1.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000029215	-	393	XM_002712601	ENSOCUP00000019518	130 (aa)	XP_002712647	G1TQC3

Gene Model

Click here to download ENSOCUG00000027419's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000027419's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000027419	-	100	100.000	ENSOCUG00000001767	-	95	100.000
ENSOCUG00000027419	-	100	100.000	ENSOCUG00000024077	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000027419	-	100	91.538	ENSG00000239789	MRPS17	100	91.538	Homo_sapiens
ENSOCUG00000027419	-	98	75.000	ENSAPOG00000000295	mrps17	81	75.000	Acanthochromis_polyacanthus
ENSOCUG00000027419	-	100	88.462	ENSAMEG00000016161	-	95	88.462	Ailuropoda_melanoleuca
ENSOCUG00000027419	-	93	75.200	ENSACIG00000019454	mrps17	90	74.194	Amphilophus_citrinellus
ENSOCUG00000027419	-	98	73.485	ENSAOCG00000015138	mrps17	90	73.485	Amphiprion_ocellaris
ENSOCUG00000027419	-	98	74.242	ENSAPEG00000017481	mrps17	90	74.242	Amphiprion_percula
ENSOCUG00000027419	-	97	73.810	ENSATEG00000007899	mrps17	90	73.438	Anabas_testudineus
ENSOCUG00000027419	-	100	72.794	ENSAPLG00000010523	-	99	72.794	Anas_platyrhynchos
ENSOCUG00000027419	-	69	87.778	ENSANAG00000030302	-	80	87.778	Aotus_nancymaae
ENSOCUG00000027419	-	100	75.385	ENSANAG00000025061	-	100	75.385	Aotus_nancymaae
ENSOCUG00000027419	-	100	71.538	ENSANAG00000023853	-	100	71.538	Aotus_nancymaae
ENSOCUG00000027419	-	98	74.242	ENSACLG00000007174	mrps17	90	74.242	Astatotilapia_calliptera
ENSOCUG00000027419	-	97	70.000	ENSAMXG00000030410	mrps17	94	69.173	Astyanax_mexicanus
ENSOCUG00000027419	-	100	92.308	ENSBTAG00000007934	MRPS17	100	92.308	Bos_taurus
ENSOCUG00000027419	-	100	91.538	ENSBTAG00000023186	-	100	91.538	Bos_taurus
ENSOCUG00000027419	-	100	87.692	ENSCJAG00000022938	-	100	87.692	Callithrix_jacchus
ENSOCUG00000027419	-	100	80.000	ENSCJAG00000022879	-	100	80.000	Callithrix_jacchus
ENSOCUG00000027419	-	100	88.462	ENSCJAG00000021291	-	100	88.462	Callithrix_jacchus
ENSOCUG00000027419	-	100	91.538	ENSCAFG00000010098	-	92	91.538	Canis_familiaris
ENSOCUG00000027419	-	100	91.538	ENSCAFG00020004866	-	100	91.538	Canis_lupus_dingo
ENSOCUG00000027419	-	100	91.538	ENSCHIG00000014572	-	100	91.538	Capra_hircus
ENSOCUG00000027419	-	100	95.385	ENSTSYG00000001260	-	100	95.385	Carlito_syrichta
ENSOCUG00000027419	-	95	89.516	ENSCAPG00000006241	-	100	89.516	Cavia_aperea
ENSOCUG00000027419	-	100	89.231	ENSCCAG00000025426	-	100	89.231	Cebus_capucinus
ENSOCUG00000027419	-	100	72.308	ENSCCAG00000037194	-	100	72.308	Cebus_capucinus
ENSOCUG00000027419	-	100	73.077	ENSCATG00000030575	-	100	73.077	Cercocebus_atys
ENSOCUG00000027419	-	84	89.091	ENSCATG00000039682	-	100	89.091	Cercocebus_atys
ENSOCUG00000027419	-	100	92.308	ENSCLAG00000007650	-	100	92.308	Chinchilla_lanigera
ENSOCUG00000027419	-	100	91.538	ENSCSAG00000016120	-	100	91.538	Chlorocebus_sabaeus
ENSOCUG00000027419	-	100	82.308	ENSCSAG00000019470	-	100	82.308	Chlorocebus_sabaeus
ENSOCUG00000027419	-	68	87.640	ENSCHOG00000013255	-	100	87.640	Choloepus_hoffmanni
ENSOCUG00000027419	-	100	89.231	ENSCHOG00000010576	-	100	89.231	Choloepus_hoffmanni
ENSOCUG00000027419	-	100	74.265	ENSCPBG00000014888	-	99	74.265	Chrysemys_picta_bellii
ENSOCUG00000027419	-	100	76.154	ENSCANG00000035889	-	100	76.154	Colobus_angolensis_palliatus
ENSOCUG00000027419	-	100	91.538	ENSCANG00000030538	-	100	91.538	Colobus_angolensis_palliatus
ENSOCUG00000027419	-	100	70.769	ENSCANG00000035780	-	94	70.769	Colobus_angolensis_palliatus
ENSOCUG00000027419	-	99	84.496	ENSCGRG00001012873	Mrps17	100	84.496	Cricetulus_griseus_chok1gshd
ENSOCUG00000027419	-	98	73.485	ENSCSEG00000018563	mrps17	90	73.485	Cynoglossus_semilaevis
ENSOCUG00000027419	-	98	75.000	ENSCVAG00000006034	mrps17	90	75.000	Cyprinodon_variegatus
ENSOCUG00000027419	-	99	73.684	ENSDARG00000054164	mrps17	97	73.684	Danio_rerio
ENSOCUG00000027419	-	100	90.769	ENSDNOG00000014785	-	92	90.769	Dasypus_novemcinctus
ENSOCUG00000027419	-	74	35.417	FBgn0034986	mRpS17	62	35.417	Drosophila_melanogaster
ENSOCUG00000027419	-	83	62.037	ENSEBUG00000010858	mrps17	64	62.037	Eptatretus_burgeri
ENSOCUG00000027419	-	94	94.262	ENSEASG00005008885	-	100	94.262	Equus_asinus_asinus
ENSOCUG00000027419	-	94	94.262	ENSECAG00000012583	-	100	94.262	Equus_caballus
ENSOCUG00000027419	-	91	77.966	ENSECAG00000028191	-	97	77.966	Equus_caballus
ENSOCUG00000027419	-	98	71.852	ENSELUG00000006708	mrps17	89	71.852	Esox_lucius
ENSOCUG00000027419	-	100	94.615	ENSFCAG00000041039	-	100	94.615	Felis_catus
ENSOCUG00000027419	-	98	75.188	ENSFALG00000006796	-	90	75.188	Ficedula_albicollis
ENSOCUG00000027419	-	100	91.538	ENSFDAG00000001915	-	100	91.538	Fukomys_damarensis
ENSOCUG00000027419	-	98	73.077	ENSFHEG00000023082	mrps17	90	73.077	Fundulus_heteroclitus
ENSOCUG00000027419	-	82	77.570	ENSGMOG00000007056	mrps17	79	77.570	Gadus_morhua
ENSOCUG00000027419	-	100	75.000	ENSGALG00000002379	MRPS17	99	75.000	Gallus_gallus
ENSOCUG00000027419	-	98	70.455	ENSGAFG00000001727	mrps17	90	70.455	Gambusia_affinis
ENSOCUG00000027419	-	99	70.149	ENSGACG00000020492	mrps17	96	70.149	Gasterosteus_aculeatus
ENSOCUG00000027419	-	100	74.265	ENSGAGG00000022429	-	100	74.265	Gopherus_agassizii
ENSOCUG00000027419	-	100	92.308	ENSGGOG00000039358	-	100	92.308	Gorilla_gorilla
ENSOCUG00000027419	-	100	75.385	ENSGGOG00000044141	-	100	75.385	Gorilla_gorilla
ENSOCUG00000027419	-	98	74.242	ENSHBUG00000006127	mrps17	90	74.242	Haplochromis_burtoni
ENSOCUG00000027419	-	100	70.992	ENSHGLG00000010593	-	100	70.992	Heterocephalus_glaber_female
ENSOCUG00000027419	-	100	70.992	ENSHGLG00100012532	-	100	70.992	Heterocephalus_glaber_male
ENSOCUG00000027419	-	100	95.385	ENSHGLG00100010825	-	100	95.385	Heterocephalus_glaber_male
ENSOCUG00000027419	-	97	67.188	ENSHCOG00000009491	mrps17	92	67.188	Hippocampus_comes
ENSOCUG00000027419	-	98	72.727	ENSIPUG00000007844	MRPS17	94	72.727	Ictalurus_punctatus
ENSOCUG00000027419	-	88	73.913	ENSJJAG00000022596	-	90	73.913	Jaculus_jaculus
ENSOCUG00000027419	-	98	75.000	ENSKMAG00000006452	mrps17	90	75.000	Kryptolebias_marmoratus
ENSOCUG00000027419	-	98	71.429	ENSLBEG00000000120	mrps17	91	71.429	Labrus_bergylta
ENSOCUG00000027419	-	100	73.684	ENSLACG00000018908	mrps17	93	73.684	Latimeria_chalumnae
ENSOCUG00000027419	-	98	70.455	ENSLOCG00000004118	mrps17	92	70.455	Lepisosteus_oculatus
ENSOCUG00000027419	-	92	89.167	ENSLAFG00000027907	-	100	89.167	Loxodonta_africana
ENSOCUG00000027419	-	100	92.308	ENSMFAG00000038594	-	100	92.308	Macaca_fascicularis
ENSOCUG00000027419	-	100	86.154	ENSMMUG00000000585	-	76	86.154	Macaca_mulatta
ENSOCUG00000027419	-	100	80.769	ENSMMUG00000041709	-	94	80.769	Macaca_mulatta
ENSOCUG00000027419	-	100	92.308	ENSMNEG00000035442	-	100	92.308	Macaca_nemestrina
ENSOCUG00000027419	-	100	91.538	ENSMLEG00000040782	-	100	91.538	Mandrillus_leucophaeus
ENSOCUG00000027419	-	100	79.231	ENSMLEG00000011393	-	94	79.231	Mandrillus_leucophaeus
ENSOCUG00000027419	-	98	71.429	ENSMAMG00000020981	mrps17	90	71.429	Mastacembelus_armatus
ENSOCUG00000027419	-	98	74.242	ENSMZEG00005024876	mrps17	90	74.242	Maylandia_zebra
ENSOCUG00000027419	-	100	75.000	ENSMGAG00000004317	-	99	75.000	Meleagris_gallopavo
ENSOCUG00000027419	-	99	84.496	ENSMAUG00000021017	Mrps17	100	84.496	Mesocricetus_auratus
ENSOCUG00000027419	-	100	96.154	ENSMICG00000046806	-	100	96.154	Microcebus_murinus
ENSOCUG00000027419	-	88	78.070	ENSMOCG00000017721	-	86	78.070	Microtus_ochrogaster
ENSOCUG00000027419	-	99	81.395	ENSMOCG00000008471	-	100	81.395	Microtus_ochrogaster
ENSOCUG00000027419	-	98	72.180	ENSMMOG00000012804	mrps17	94	72.180	Mola_mola
ENSOCUG00000027419	-	99	82.946	ENSMODG00000006523	-	100	82.946	Monodelphis_domestica
ENSOCUG00000027419	-	98	72.727	ENSMALG00000018057	mrps17	90	72.727	Monopterus_albus
ENSOCUG00000027419	-	98	81.890	MGP_CAROLIEiJ_G0027784	Mrps17	100	89.655	Mus_caroli
ENSOCUG00000027419	-	98	81.890	ENSMUSG00000034211	Mrps17	100	89.655	Mus_musculus
ENSOCUG00000027419	-	98	81.890	MGP_PahariEiJ_G0024399	Mrps17	100	89.655	Mus_pahari
ENSOCUG00000027419	-	98	81.890	MGP_SPRETEiJ_G0028783	Mrps17	100	89.655	Mus_spretus
ENSOCUG00000027419	-	100	93.077	ENSMPUG00000016230	-	70	93.077	Mustela_putorius_furo
ENSOCUG00000027419	-	100	89.231	ENSMLUG00000016710	-	100	89.231	Myotis_lucifugus
ENSOCUG00000027419	-	99	89.147	ENSNGAG00000020609	Mrps17	99	89.147	Nannospalax_galili
ENSOCUG00000027419	-	98	73.485	ENSNBRG00000002238	mrps17	90	73.485	Neolamprologus_brichardi
ENSOCUG00000027419	-	100	92.308	ENSNLEG00000032290	-	100	92.308	Nomascus_leucogenys
ENSOCUG00000027419	-	98	81.250	ENSMEUG00000005143	-	99	81.250	Notamacropus_eugenii
ENSOCUG00000027419	-	98	89.062	ENSOPRG00000009945	-	100	89.062	Ochotona_princeps
ENSOCUG00000027419	-	100	69.231	ENSODEG00000006408	-	100	69.231	Octodon_degus
ENSOCUG00000027419	-	78	87.255	ENSODEG00000015145	-	100	87.255	Octodon_degus
ENSOCUG00000027419	-	100	90.000	ENSODEG00000018639	-	100	90.000	Octodon_degus
ENSOCUG00000027419	-	100	76.154	ENSODEG00000004346	-	100	76.154	Octodon_degus
ENSOCUG00000027419	-	85	82.883	ENSODEG00000014911	-	99	82.883	Octodon_degus
ENSOCUG00000027419	-	100	86.923	ENSODEG00000017232	-	100	86.923	Octodon_degus
ENSOCUG00000027419	-	98	75.000	ENSONIG00000008746	mrps17	90	75.000	Oreochromis_niloticus
ENSOCUG00000027419	-	99	75.758	ENSORLG00000002795	mrps17	90	75.758	Oryzias_latipes
ENSOCUG00000027419	-	99	75.758	ENSORLG00020016792	mrps17	90	75.758	Oryzias_latipes_hni
ENSOCUG00000027419	-	99	75.758	ENSORLG00015001149	mrps17	90	75.758	Oryzias_latipes_hsok
ENSOCUG00000027419	-	97	76.744	ENSOMEG00000009095	mrps17	92	76.336	Oryzias_melastigma
ENSOCUG00000027419	-	100	83.846	ENSOGAG00000009088	-	100	83.846	Otolemur_garnettii
ENSOCUG00000027419	-	100	93.846	ENSOGAG00000010486	-	100	93.846	Otolemur_garnettii
ENSOCUG00000027419	-	100	91.538	ENSOARG00000009925	-	88	91.538	Ovis_aries
ENSOCUG00000027419	-	100	92.308	ENSPPAG00000036712	-	100	92.308	Pan_paniscus
ENSOCUG00000027419	-	100	74.615	ENSPPAG00000038238	-	100	74.615	Pan_paniscus
ENSOCUG00000027419	-	100	94.615	ENSPPRG00000000525	-	100	94.615	Panthera_pardus
ENSOCUG00000027419	-	100	94.615	ENSPTIG00000019404	-	82	94.615	Panthera_tigris_altaica
ENSOCUG00000027419	-	100	87.692	ENSPTRG00000046133	-	94	87.692	Pan_troglodytes
ENSOCUG00000027419	-	100	92.308	ENSPTRG00000043904	-	100	92.308	Pan_troglodytes
ENSOCUG00000027419	-	100	76.154	ENSPTRG00000048604	-	100	76.154	Pan_troglodytes
ENSOCUG00000027419	-	100	92.308	ENSPTRG00000019203	MRPS17	100	92.308	Pan_troglodytes
ENSOCUG00000027419	-	100	83.846	ENSPTRG00000051838	-	100	83.846	Pan_troglodytes
ENSOCUG00000027419	-	100	93.077	ENSPANG00000015285	-	100	93.077	Papio_anubis
ENSOCUG00000027419	-	89	69.828	ENSPANG00000030519	-	100	69.828	Papio_anubis
ENSOCUG00000027419	-	97	66.154	ENSPKIG00000018389	mrps17	94	66.154	Paramormyrops_kingsleyae
ENSOCUG00000027419	-	100	75.735	ENSPSIG00000013261	-	99	75.735	Pelodiscus_sinensis
ENSOCUG00000027419	-	79	69.903	ENSPMAG00000006299	mrps17	66	69.903	Petromyzon_marinus
ENSOCUG00000027419	-	97	69.231	ENSPFOG00000010719	mrps17	90	68.939	Poecilia_formosa
ENSOCUG00000027419	-	97	69.231	ENSPLAG00000018054	mrps17	90	68.939	Poecilia_latipinna
ENSOCUG00000027419	-	97	69.231	ENSPMEG00000014029	mrps17	90	68.939	Poecilia_mexicana
ENSOCUG00000027419	-	98	68.182	ENSPREG00000009010	mrps17	92	68.182	Poecilia_reticulata
ENSOCUG00000027419	-	100	92.308	ENSPPYG00000017547	-	100	92.308	Pongo_abelii
ENSOCUG00000027419	-	84	80.734	ENSPCOG00000000608	-	92	80.734	Propithecus_coquereli
ENSOCUG00000027419	-	100	95.385	ENSPCOG00000013668	-	100	95.385	Propithecus_coquereli
ENSOCUG00000027419	-	100	93.077	ENSPVAG00000006305	-	99	93.077	Pteropus_vampyrus
ENSOCUG00000027419	-	98	74.242	ENSPNYG00000018693	mrps17	90	74.242	Pundamilia_nyererei
ENSOCUG00000027419	-	97	74.615	ENSPNAG00000015336	mrps17	80	73.684	Pygocentrus_nattereri
ENSOCUG00000027419	-	98	83.465	ENSRNOG00000000926	Mrps17	100	83.465	Rattus_norvegicus
ENSOCUG00000027419	-	98	74.074	ENSRNOG00000030847	AABR07012868.1	92	74.074	Rattus_norvegicus
ENSOCUG00000027419	-	92	91.597	ENSRBIG00000032061	-	100	91.597	Rhinopithecus_bieti
ENSOCUG00000027419	-	98	92.969	ENSRBIG00000032287	-	99	92.969	Rhinopithecus_bieti
ENSOCUG00000027419	-	98	92.969	ENSRROG00000021955	-	99	92.969	Rhinopithecus_roxellana
ENSOCUG00000027419	-	100	92.308	ENSRROG00000000039	-	100	92.308	Rhinopithecus_roxellana
ENSOCUG00000027419	-	100	66.923	ENSSBOG00000030322	-	100	66.923	Saimiri_boliviensis_boliviensis
ENSOCUG00000027419	-	100	90.000	ENSSBOG00000025889	-	100	90.000	Saimiri_boliviensis_boliviensis
ENSOCUG00000027419	-	95	78.049	ENSSBOG00000003355	-	94	78.049	Saimiri_boliviensis_boliviensis
ENSOCUG00000027419	-	99	82.171	ENSSHAG00000009749	-	100	82.171	Sarcophilus_harrisii
ENSOCUG00000027419	-	99	67.424	ENSSFOG00015006180	mrps17	92	67.424	Scleropages_formosus
ENSOCUG00000027419	-	98	72.932	ENSSMAG00000001680	mrps17	89	72.932	Scophthalmus_maximus
ENSOCUG00000027419	-	98	73.684	ENSSDUG00000017736	mrps17	90	73.684	Seriola_dumerili
ENSOCUG00000027419	-	98	73.684	ENSSLDG00000015517	mrps17	90	73.684	Seriola_lalandi_dorsalis
ENSOCUG00000027419	-	100	72.794	ENSSPUG00000002623	-	99	72.794	Sphenodon_punctatus
ENSOCUG00000027419	-	99	69.925	ENSSPAG00000008641	mrps17	90	69.925	Stegastes_partitus
ENSOCUG00000027419	-	100	90.769	ENSSSCG00000007749	-	100	90.769	Sus_scrofa
ENSOCUG00000027419	-	100	80.769	ENSSSCG00000034769	-	97	78.333	Sus_scrofa
ENSOCUG00000027419	-	100	75.000	ENSTGUG00000005052	MRPS17	99	75.000	Taeniopygia_guttata
ENSOCUG00000027419	-	97	70.229	ENSTRUG00000024068	mrps17	90	69.925	Takifugu_rubripes
ENSOCUG00000027419	-	98	71.429	ENSTNIG00000016121	mrps17	90	71.429	Tetraodon_nigroviridis
ENSOCUG00000027419	-	68	93.182	ENSTBEG00000007385	-	100	93.182	Tupaia_belangeri
ENSOCUG00000027419	-	100	90.000	ENSTTRG00000015139	-	100	90.000	Tursiops_truncatus
ENSOCUG00000027419	-	100	91.538	ENSUAMG00000002970	-	100	91.538	Ursus_americanus
ENSOCUG00000027419	-	100	90.769	ENSUMAG00000015822	-	100	90.769	Ursus_maritimus
ENSOCUG00000027419	-	100	92.308	ENSVVUG00000016664	-	100	92.308	Vulpes_vulpes
ENSOCUG00000027419	-	99	69.697	ENSXETG00000010088	mrps17	94	69.697	Xenopus_tropicalis
ENSOCUG00000027419	-	85	76.577	ENSXCOG00000009153	mrps17	86	76.577	Xiphophorus_couchianus
ENSOCUG00000027419	-	97	70.000	ENSXMAG00000007366	mrps17	90	69.697	Xiphophorus_maculatus