EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000027539 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 876 bases
Position: chr9:56148537-56149412
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000020675	Ribosomal_S5_C	PF03719.15	6.7e-16	1	1
ENSOCUP00000020675	Ribosomal_S5	PF00333.20	1.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000020930	-	642	-	ENSOCUP00000020675	214 (aa)	-	G1TUF0

Gene Model

Click here to download ENSOCUG00000027539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000027539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000027539	-	80	72.928	ENSOCUG00000009140	-	68	74.138
ENSOCUG00000027539	-	79	53.801	ENSOCUG00000026818	-	75	53.801
ENSOCUG00000027539	-	65	74.324	ENSOCUG00000026627	-	65	74.324
ENSOCUG00000027539	-	77	50.289	ENSOCUG00000021571	-	77	50.289
ENSOCUG00000027539	-	80	74.033	ENSOCUG00000022355	-	64	75.287
ENSOCUG00000027539	-	75	53.846	ENSOCUG00000023086	-	77	53.846
ENSOCUG00000027539	-	80	64.972	ENSOCUG00000012731	-	65	64.972

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000027539	-	53	69.167	ENSCJAG00000048258	-	85	69.167	Callithrix_jacchus
ENSOCUG00000027539	-	64	70.833	ENSCAFG00020011187	-	75	71.034	Canis_lupus_dingo
ENSOCUG00000027539	-	67	54.730	ENSTSYG00000036206	-	65	54.730	Carlito_syrichta
ENSOCUG00000027539	-	66	72.789	ENSCANG00000042680	-	66	72.789	Colobus_angolensis_palliatus
ENSOCUG00000027539	-	73	69.512	ENSCANG00000028142	-	76	69.512	Colobus_angolensis_palliatus
ENSOCUG00000027539	-	70	70.513	ENSCANG00000038720	-	58	70.513	Colobus_angolensis_palliatus
ENSOCUG00000027539	-	66	64.430	ENSDORG00000024357	-	56	64.430	Dipodomys_ordii
ENSOCUG00000027539	-	65	70.345	ENSEASG00005016168	-	74	70.345	Equus_asinus_asinus
ENSOCUG00000027539	-	59	67.424	ENSGGOG00000022802	-	71	67.424	Gorilla_gorilla
ENSOCUG00000027539	-	62	60.993	ENSHGLG00000010015	-	54	60.993	Heterocephalus_glaber_female
ENSOCUG00000027539	-	62	60.993	ENSHGLG00100011100	-	54	60.993	Heterocephalus_glaber_male
ENSOCUG00000027539	-	70	67.949	ENSMFAG00000032180	-	67	67.949	Macaca_fascicularis
ENSOCUG00000027539	-	72	67.284	ENSMFAG00000001303	-	75	67.284	Macaca_fascicularis
ENSOCUG00000027539	-	66	75.000	ENSMLEG00000038670	-	82	75.000	Mandrillus_leucophaeus
ENSOCUG00000027539	-	67	60.135	ENSMAUG00000001106	-	71	60.135	Mesocricetus_auratus
ENSOCUG00000027539	-	70	59.355	ENSMOCG00000010955	-	71	59.355	Microtus_ochrogaster
ENSOCUG00000027539	-	92	57.214	ENSNGAG00000014320	-	80	57.214	Nannospalax_galili
ENSOCUG00000027539	-	67	71.333	ENSODEG00000010744	-	65	71.333	Octodon_degus
ENSOCUG00000027539	-	66	64.626	ENSPPAG00000034716	-	65	64.626	Pan_paniscus
ENSOCUG00000027539	-	59	65.909	ENSPTRG00000044776	-	71	65.909	Pan_troglodytes
ENSOCUG00000027539	-	73	70.370	ENSPTRG00000051922	-	66	70.370	Pan_troglodytes
ENSOCUG00000027539	-	80	69.444	ENSPEMG00000016591	-	69	69.444	Peromyscus_maniculatus_bairdii
ENSOCUG00000027539	-	66	72.109	ENSPCOG00000026440	-	72	72.109	Propithecus_coquereli
ENSOCUG00000027539	-	76	70.000	ENSRBIG00000030472	-	80	70.000	Rhinopithecus_bieti
ENSOCUG00000027539	-	79	62.500	ENSRBIG00000035779	-	67	62.500	Rhinopithecus_bieti
ENSOCUG00000027539	-	50	66.372	ENSRROG00000017055	-	71	66.372	Rhinopithecus_roxellana
ENSOCUG00000027539	-	62	71.739	ENSSBOG00000014367	-	63	71.739	Saimiri_boliviensis_boliviensis