EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOCUG00000027716 (Gene tree)
Gene ID
100352797
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Oryctolagus_cuniculus
Status
putative
Strand
Plus strand
Length
21538 bases
Position
chr21:12209603-12231140
Accession
100352797
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOCUP00000020516RRM_1PF00076.222.3e-2212
ENSOCUP00000020516RRM_1PF00076.222.3e-2222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOCUT00000024977MSI1-2011433XM_008272304ENSOCUP00000020516311 (aa)XP_008270526G1TTZ3
Gene Model
Click here to download ENSOCUG00000027716's gene model file
Pathways
Pathway IDPathway NameSource
ocu03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000027716's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOCUG00000027716MSI15832.979ENSOCUG00000023949-6432.821
ENSOCUG00000027716MSI110069.775ENSOCUG00000010440MSI29771.383
ENSOCUG00000027716MSI15035.570ENSOCUG00000014210-7835.570
ENSOCUG00000027716MSI15837.634ENSOCUG00000005703-9037.634
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOCUG00000027716MSI110099.678ENSG00000135097MSI19499.678Homo_sapiens
ENSOCUG00000027716MSI110086.174ENSAPOG00000023458-9486.174Acanthochromis_polyacanthus
ENSOCUG00000027716MSI110086.174ENSAPOG00000003191MSI19486.174Acanthochromis_polyacanthus
ENSOCUG00000027716MSI110080.165ENSAMEG00000013302MSI110080.165Ailuropoda_melanoleuca
ENSOCUG00000027716MSI19682.550ENSACIG00000017754-7882.550Amphilophus_citrinellus
ENSOCUG00000027716MSI110076.849ENSAOCG00000009031-9577.170Amphiprion_ocellaris
ENSOCUG00000027716MSI110086.174ENSAOCG00000003804MSI19486.174Amphiprion_ocellaris
ENSOCUG00000027716MSI110086.174ENSAPEG00000006857-7986.174Amphiprion_percula
ENSOCUG00000027716MSI110086.174ENSAPEG00000003245MSI19486.174Amphiprion_percula
ENSOCUG00000027716MSI110083.013ENSATEG00000023779-9383.013Anabas_testudineus
ENSOCUG00000027716MSI110085.852ENSATEG00000017059MSI19585.852Anabas_testudineus
ENSOCUG00000027716MSI110096.785ENSACAG00000002762MSI19496.785Anolis_carolinensis
ENSOCUG00000027716MSI17995.951ENSANAG00000027901-8695.951Aotus_nancymaae
ENSOCUG00000027716MSI110099.678ENSANAG00000027151MSI19499.678Aotus_nancymaae
ENSOCUG00000027716MSI110085.531ENSACLG00000000117-10085.531Astatotilapia_calliptera
ENSOCUG00000027716MSI110085.209ENSACLG00000011230MSI19485.209Astatotilapia_calliptera
ENSOCUG00000027716MSI110085.209ENSAMXG00000038960msi17685.209Astyanax_mexicanus
ENSOCUG00000027716MSI110099.678ENSBTAG00000009800MSI110099.678Bos_taurus
ENSOCUG00000027716MSI110099.678ENSCJAG00000008578MSI19499.678Callithrix_jacchus
ENSOCUG00000027716MSI110099.357ENSCAFG00000010283MSI19499.357Canis_familiaris
ENSOCUG00000027716MSI110099.678ENSCAFG00020020585MSI110099.678Canis_lupus_dingo
ENSOCUG00000027716MSI110093.396ENSCHIG00000024304MSI19893.396Capra_hircus
ENSOCUG00000027716MSI110099.678ENSTSYG00000033949MSI19599.678Carlito_syrichta
ENSOCUG00000027716MSI188100.000ENSCAPG00000003919MSI178100.000Cavia_aperea
ENSOCUG00000027716MSI110099.678ENSCPOG00000012361MSI110099.678Cavia_porcellus
ENSOCUG00000027716MSI110099.678ENSCCAG00000035567MSI19499.678Cebus_capucinus
ENSOCUG00000027716MSI110099.678ENSCATG00000030019MSI19499.678Cercocebus_atys
ENSOCUG00000027716MSI110099.678ENSCLAG00000011329MSI110099.678Chinchilla_lanigera
ENSOCUG00000027716MSI17195.133ENSCSAG00000002265MSI18995.133Chlorocebus_sabaeus
ENSOCUG00000027716MSI110095.820ENSCPBG00000011349MSI19495.820Chrysemys_picta_bellii
ENSOCUG00000027716MSI110099.678ENSCANG00000040651MSI19999.678Colobus_angolensis_palliatus
ENSOCUG00000027716MSI110099.678ENSCGRG00001018883Msi19499.678Cricetulus_griseus_chok1gshd
ENSOCUG00000027716MSI110099.678ENSCGRG00000002191Msi17399.678Cricetulus_griseus_crigri
ENSOCUG00000027716MSI110077.814ENSCSEG00000011032MSI110077.814Cynoglossus_semilaevis
ENSOCUG00000027716MSI110084.566ENSCSEG00000008352-9484.566Cynoglossus_semilaevis
ENSOCUG00000027716MSI110085.852ENSCSEG00000005834-9485.852Cynoglossus_semilaevis
ENSOCUG00000027716MSI110086.174ENSCVAG00000009100MSI19486.174Cyprinodon_variegatus
ENSOCUG00000027716MSI17468.398ENSCVAG00000017463-8968.398Cyprinodon_variegatus
ENSOCUG00000027716MSI17482.096ENSDARG00000102015CABZ01037298.18982.096Danio_rerio
ENSOCUG00000027716MSI110082.315ENSDARG00000010710msi110085.022Danio_rerio
ENSOCUG00000027716MSI110089.068ENSDNOG00000005713MSI19189.068Dasypus_novemcinctus
ENSOCUG00000027716MSI110099.678ENSDORG00000005610Msi19399.678Dipodomys_ordii
ENSOCUG00000027716MSI110095.177ENSETEG00000004756MSI19995.177Echinops_telfairi
ENSOCUG00000027716MSI110099.678ENSEASG00005004736MSI19499.678Equus_asinus_asinus
ENSOCUG00000027716MSI110099.678ENSECAG00000017526MSI19499.678Equus_caballus
ENSOCUG00000027716MSI110080.060ENSELUG00000023219MSI19280.060Esox_lucius
ENSOCUG00000027716MSI110080.707ENSELUG00000023280-10080.386Esox_lucius
ENSOCUG00000027716MSI110099.678ENSFCAG00000011007MSI19499.678Felis_catus
ENSOCUG00000027716MSI110095.498ENSFALG00000007574MSI110095.498Ficedula_albicollis
ENSOCUG00000027716MSI110099.357ENSFDAG00000019586MSI19999.357Fukomys_damarensis
ENSOCUG00000027716MSI110086.495ENSFHEG00000022446MSI19486.495Fundulus_heteroclitus
ENSOCUG00000027716MSI110085.852ENSFHEG00000003560-9485.852Fundulus_heteroclitus
ENSOCUG00000027716MSI110083.601ENSGMOG00000001006MSI19483.280Gadus_morhua
ENSOCUG00000027716MSI110076.849ENSGMOG00000017838-8576.849Gadus_morhua
ENSOCUG00000027716MSI19985.588ENSGALG00000007227MSI19385.588Gallus_gallus
ENSOCUG00000027716MSI110068.269ENSGAFG00000005860-8968.269Gambusia_affinis
ENSOCUG00000027716MSI110085.209ENSGAFG00000021522MSI19485.209Gambusia_affinis
ENSOCUG00000027716MSI110081.350ENSGACG00000008674-9481.350Gasterosteus_aculeatus
ENSOCUG00000027716MSI110084.887ENSGACG00000012679MSI19484.887Gasterosteus_aculeatus
ENSOCUG00000027716MSI110095.820ENSGAGG00000016037MSI19495.820Gopherus_agassizii
ENSOCUG00000027716MSI110099.678ENSGGOG00000010328MSI19999.678Gorilla_gorilla
ENSOCUG00000027716MSI110085.531ENSHBUG00000011841-9485.531Haplochromis_burtoni
ENSOCUG00000027716MSI110085.209ENSHBUG00000021921MSI19485.209Haplochromis_burtoni
ENSOCUG00000027716MSI110099.357ENSHGLG00000012782MSI19499.357Heterocephalus_glaber_female
ENSOCUG00000027716MSI110099.357ENSHGLG00100016848MSI19999.357Heterocephalus_glaber_male
ENSOCUG00000027716MSI110081.029ENSHCOG00000012019MSI110081.029Hippocampus_comes
ENSOCUG00000027716MSI110084.566ENSHCOG00000012067-8984.566Hippocampus_comes
ENSOCUG00000027716MSI110084.566ENSIPUG00000001976msi19980.707Ictalurus_punctatus
ENSOCUG00000027716MSI110099.678ENSSTOG00000009799MSI110099.678Ictidomys_tridecemlineatus
ENSOCUG00000027716MSI110099.678ENSJJAG00000010463Msi19499.678Jaculus_jaculus
ENSOCUG00000027716MSI110081.672ENSJJAG00000010643-9481.350Jaculus_jaculus
ENSOCUG00000027716MSI110085.209ENSKMAG00000011251MSI19485.209Kryptolebias_marmoratus
ENSOCUG00000027716MSI110082.958ENSKMAG00000019877-10082.958Kryptolebias_marmoratus
ENSOCUG00000027716MSI110085.531ENSLBEG00000001375-9485.531Labrus_bergylta
ENSOCUG00000027716MSI110085.531ENSLBEG00000008789MSI19485.531Labrus_bergylta
ENSOCUG00000027716MSI110087.781ENSLACG00000018287MSI110087.781Latimeria_chalumnae
ENSOCUG00000027716MSI110088.498ENSLAFG00000009412MSI110088.498Loxodonta_africana
ENSOCUG00000027716MSI110099.678ENSMFAG00000001798MSI110099.678Macaca_fascicularis
ENSOCUG00000027716MSI110099.678ENSMMUG00000031527MSI19699.678Macaca_mulatta
ENSOCUG00000027716MSI110099.678ENSMNEG00000040034MSI19499.678Macaca_nemestrina
ENSOCUG00000027716MSI110099.678ENSMLEG00000003921MSI19999.678Mandrillus_leucophaeus
ENSOCUG00000027716MSI110085.852ENSMAMG00000018426-9485.852Mastacembelus_armatus
ENSOCUG00000027716MSI110084.887ENSMAMG00000002279MSI19484.887Mastacembelus_armatus
ENSOCUG00000027716MSI110085.209ENSMZEG00005026892MSI19485.209Maylandia_zebra
ENSOCUG00000027716MSI110085.531ENSMZEG00005000340-9485.531Maylandia_zebra
ENSOCUG00000027716MSI15498.817ENSMGAG00000016518-10098.817Meleagris_gallopavo
ENSOCUG00000027716MSI16899.528ENSMAUG00000016820Msi110099.528Mesocricetus_auratus
ENSOCUG00000027716MSI110099.678ENSMICG00000033181MSI19499.678Microcebus_murinus
ENSOCUG00000027716MSI110099.357ENSMOCG00000002286Msi19499.357Microtus_ochrogaster
ENSOCUG00000027716MSI110075.563ENSMMOG00000010492MSI19675.563Mola_mola
ENSOCUG00000027716MSI110082.637ENSMMOG00000012265-9682.637Mola_mola
ENSOCUG00000027716MSI110065.924ENSMODG00000003189-10065.924Monodelphis_domestica
ENSOCUG00000027716MSI110085.209ENSMALG00000001426-10085.209Monopterus_albus
ENSOCUG00000027716MSI110085.531ENSMALG00000017889MSI19485.531Monopterus_albus
ENSOCUG00000027716MSI110099.035MGP_CAROLIEiJ_G0027626Msi19499.035Mus_caroli
ENSOCUG00000027716MSI110099.035ENSMUSG00000054256Msi19995.498Mus_musculus
ENSOCUG00000027716MSI110098.714MGP_PahariEiJ_G0024206Msi19498.714Mus_pahari
ENSOCUG00000027716MSI110099.035MGP_SPRETEiJ_G0028624Msi19499.035Mus_spretus
ENSOCUG00000027716MSI110099.678ENSMPUG00000003168MSI110099.678Mustela_putorius_furo
ENSOCUG00000027716MSI110089.623ENSMLUG00000010313MSI110089.623Myotis_lucifugus
ENSOCUG00000027716MSI110099.678ENSNGAG00000014508Msi19399.678Nannospalax_galili
ENSOCUG00000027716MSI110085.531ENSNBRG00000000841-9485.531Neolamprologus_brichardi
ENSOCUG00000027716MSI18277.432ENSNBRG00000018012MSI19977.432Neolamprologus_brichardi
ENSOCUG00000027716MSI110088.746ENSNLEG00000015636MSI19488.746Nomascus_leucogenys
ENSOCUG00000027716MSI110076.527ENSMEUG00000015759MSI19576.527Notamacropus_eugenii
ENSOCUG00000027716MSI19691.611ENSOPRG00000016879MSI19991.611Ochotona_princeps
ENSOCUG00000027716MSI110099.678ENSODEG00000006328MSI19999.678Octodon_degus
ENSOCUG00000027716MSI110085.852ENSONIG00000019452-9485.852Oreochromis_niloticus
ENSOCUG00000027716MSI110085.531ENSONIG00000011182MSI19485.531Oreochromis_niloticus
ENSOCUG00000027716MSI110085.531ENSORLG00000029593MSI19485.531Oryzias_latipes
ENSOCUG00000027716MSI110086.174ENSORLG00000019978-9486.174Oryzias_latipes
ENSOCUG00000027716MSI110085.531ENSORLG00020008266MSI19982.315Oryzias_latipes_hni
ENSOCUG00000027716MSI110086.174ENSORLG00020001208-6786.174Oryzias_latipes_hni
ENSOCUG00000027716MSI110085.531ENSORLG00015003916MSI19982.315Oryzias_latipes_hsok
ENSOCUG00000027716MSI110086.174ENSORLG00015013672-7182.315Oryzias_latipes_hsok
ENSOCUG00000027716MSI110086.495ENSOMEG00000002272-9786.495Oryzias_melastigma
ENSOCUG00000027716MSI110086.174ENSOMEG00000017536MSI110082.958Oryzias_melastigma
ENSOCUG00000027716MSI110098.726ENSOGAG00000003847MSI19898.726Otolemur_garnettii
ENSOCUG00000027716MSI110095.513ENSOARG00000012097MSI110095.513Ovis_aries
ENSOCUG00000027716MSI110099.678ENSPPAG00000043073MSI19999.678Pan_paniscus
ENSOCUG00000027716MSI110099.678ENSPPRG00000000370MSI19499.678Panthera_pardus
ENSOCUG00000027716MSI110099.678ENSPTIG00000008913MSI110099.678Panthera_tigris_altaica
ENSOCUG00000027716MSI110099.678ENSPTRG00000005531MSI19499.678Pan_troglodytes
ENSOCUG00000027716MSI110099.678ENSPANG00000006335MSI19499.678Papio_anubis
ENSOCUG00000027716MSI110085.852ENSPKIG00000023575-9485.852Paramormyrops_kingsleyae
ENSOCUG00000027716MSI110086.495ENSPKIG00000016497MSI19486.495Paramormyrops_kingsleyae
ENSOCUG00000027716MSI110091.318ENSPSIG00000011608-9391.318Pelodiscus_sinensis
ENSOCUG00000027716MSI17492.576ENSPSIG00000009621-10092.576Pelodiscus_sinensis
ENSOCUG00000027716MSI110069.329ENSPMGG00000007743-8969.745Periophthalmus_magnuspinnatus
ENSOCUG00000027716MSI19681.544ENSPMGG00000000514MSI19781.544Periophthalmus_magnuspinnatus
ENSOCUG00000027716MSI110099.357ENSPEMG00000010491Msi19399.357Peromyscus_maniculatus_bairdii
ENSOCUG00000027716MSI110086.174ENSPFOG00000013113MSI19486.174Poecilia_formosa
ENSOCUG00000027716MSI110085.852ENSPFOG00000008319-8185.852Poecilia_formosa
ENSOCUG00000027716MSI110086.174ENSPLAG00000014025-9486.174Poecilia_latipinna
ENSOCUG00000027716MSI110085.852ENSPLAG00000012431-9185.852Poecilia_latipinna
ENSOCUG00000027716MSI110086.174ENSPMEG00000012796MSI19486.174Poecilia_mexicana
ENSOCUG00000027716MSI110085.209ENSPMEG00000007025-9377.170Poecilia_mexicana
ENSOCUG00000027716MSI110082.637ENSPREG00000021416-9482.637Poecilia_reticulata
ENSOCUG00000027716MSI17278.571ENSPREG00000014574-10078.571Poecilia_reticulata
ENSOCUG00000027716MSI110099.678ENSPPYG00000005027MSI19499.678Pongo_abelii
ENSOCUG00000027716MSI18876.923ENSPCAG00000002300MSI110076.923Procavia_capensis
ENSOCUG00000027716MSI110099.678ENSPCOG00000017341MSI19499.678Propithecus_coquereli
ENSOCUG00000027716MSI110081.672ENSPVAG00000002225MSI19981.672Pteropus_vampyrus
ENSOCUG00000027716MSI110085.531ENSPNYG00000002529-9485.531Pundamilia_nyererei
ENSOCUG00000027716MSI110085.209ENSPNYG00000004379MSI19485.209Pundamilia_nyererei
ENSOCUG00000027716MSI110084.887ENSPNAG00000019337msi19484.887Pygocentrus_nattereri
ENSOCUG00000027716MSI110099.357ENSRNOG00000001156Msi110099.357Rattus_norvegicus
ENSOCUG00000027716MSI110099.678ENSRBIG00000036889MSI110099.678Rhinopithecus_bieti
ENSOCUG00000027716MSI110099.678ENSRROG00000041076MSI19399.678Rhinopithecus_roxellana
ENSOCUG00000027716MSI110099.678ENSSBOG00000030259MSI19899.678Saimiri_boliviensis_boliviensis
ENSOCUG00000027716MSI19787.255ENSSHAG00000006834MSI110087.255Sarcophilus_harrisii
ENSOCUG00000027716MSI110088.424ENSSFOG00015005350MSI19688.424Scleropages_formosus
ENSOCUG00000027716MSI110086.817ENSSFOG00015014964-9586.817Scleropages_formosus
ENSOCUG00000027716MSI18885.818ENSSMAG00000009156-7185.818Scophthalmus_maximus
ENSOCUG00000027716MSI110082.637ENSSMAG00000018824MSI19782.637Scophthalmus_maximus
ENSOCUG00000027716MSI110085.852ENSSDUG00000022697-9485.852Seriola_dumerili
ENSOCUG00000027716MSI110085.852ENSSDUG00000001027MSI19485.852Seriola_dumerili
ENSOCUG00000027716MSI110085.852ENSSLDG00000016832MSI19485.852Seriola_lalandi_dorsalis
ENSOCUG00000027716MSI110081.994ENSSLDG00000018706-9683.333Seriola_lalandi_dorsalis
ENSOCUG00000027716MSI110095.177ENSSPUG00000015741MSI110095.177Sphenodon_punctatus
ENSOCUG00000027716MSI110086.495ENSSPAG00000013098-10086.495Stegastes_partitus
ENSOCUG00000027716MSI17268.750ENSSPAG00000014085-10068.750Stegastes_partitus
ENSOCUG00000027716MSI110099.357ENSSSCG00000029365MSI110099.357Sus_scrofa
ENSOCUG00000027716MSI110096.463ENSTGUG00000009534MSI110096.463Taeniopygia_guttata
ENSOCUG00000027716MSI17480.952ENSTRUG00000016249MSI110073.783Takifugu_rubripes
ENSOCUG00000027716MSI110075.884ENSTRUG00000015636-7975.884Takifugu_rubripes
ENSOCUG00000027716MSI110060.000ENSTNIG00000019814-9560.000Tetraodon_nigroviridis
ENSOCUG00000027716MSI110079.936ENSTNIG00000011469MSI19479.936Tetraodon_nigroviridis
ENSOCUG00000027716MSI18889.377ENSTBEG00000007182MSI110089.377Tupaia_belangeri
ENSOCUG00000027716MSI110079.421ENSTTRG00000005663MSI110079.421Tursiops_truncatus
ENSOCUG00000027716MSI16992.237ENSUAMG00000015514MSI19492.237Ursus_americanus
ENSOCUG00000027716MSI19993.811ENSUMAG00000006176MSI18893.811Ursus_maritimus
ENSOCUG00000027716MSI110099.678ENSVVUG00000020993MSI110099.678Vulpes_vulpes
ENSOCUG00000027716MSI110091.987ENSXETG00000012216msi19592.038Xenopus_tropicalis
ENSOCUG00000027716MSI110070.418ENSXCOG00000017605MSI18970.418Xiphophorus_couchianus
ENSOCUG00000027716MSI110086.174ENSXMAG00000027103MSI19579.167Xiphophorus_maculatus
ENSOCUG00000027716MSI110085.531ENSXMAG00000018237-9485.531Xiphophorus_maculatus

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