EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000027756 (Gene tree)
Gene ID: 100340516
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 63027 bases
Position: chr16:18443384-18506410
Accession: 100340516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000025464	PRP4	PF08799.11	7.5e-14	1	1
ENSOCUP00000017037	PRP4	PF08799.11	1e-13	1	1
ENSOCUP00000025464	Prp18	PF02840.15	3.9e-63	1	1
ENSOCUP00000017037	Prp18	PF02840.15	5.1e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000027482	-	1463	-	ENSOCUP00000025464	342 (aa)	-	G1U7Q5
ENSOCUT00000031620	-	1277	XM_002717613	ENSOCUP00000017037	406 (aa)	XP_002717659	G1TJB0

Gene Model

Click here to download ENSOCUG00000027756's gene model file

Pathways

Pathway ID	Pathway Name	Source
ocu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000027756's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000027756	-	100	95.614	ENSG00000165630	PRPF18	100	99.708	Homo_sapiens
ENSOCUG00000027756	-	96	86.239	ENSAPOG00000024177	prpf18	100	85.380	Acanthochromis_polyacanthus
ENSOCUG00000027756	-	100	95.029	ENSAMEG00000013591	-	100	99.708	Ailuropoda_melanoleuca
ENSOCUG00000027756	-	96	84.709	ENSACIG00000001186	prpf18	100	84.211	Amphilophus_citrinellus
ENSOCUG00000027756	-	94	86.250	ENSAOCG00000006572	prpf18	94	82.749	Amphiprion_ocellaris
ENSOCUG00000027756	-	96	86.544	ENSAPEG00000004564	prpf18	100	85.673	Amphiprion_percula
ENSOCUG00000027756	-	100	82.456	ENSATEG00000000303	prpf18	100	84.211	Anabas_testudineus
ENSOCUG00000027756	-	96	93.272	ENSAPLG00000003387	-	99	91.471	Anas_platyrhynchos
ENSOCUG00000027756	-	96	92.705	ENSACAG00000000818	-	100	91.570	Anolis_carolinensis
ENSOCUG00000027756	-	100	95.029	ENSANAG00000037445	-	100	99.123	Aotus_nancymaae
ENSOCUG00000027756	-	96	85.321	ENSACLG00000026296	prpf18	100	84.795	Astatotilapia_calliptera
ENSOCUG00000027756	-	96	84.776	ENSAMXG00000012848	prpf18	100	84.000	Astyanax_mexicanus
ENSOCUG00000027756	-	100	94.737	ENSBTAG00000017244	PRPF18	100	99.415	Bos_taurus
ENSOCUG00000027756	-	92	39.329	WBGene00009320	F32B6.3	97	38.506	Caenorhabditis_elegans
ENSOCUG00000027756	-	100	95.029	ENSCJAG00000009432	-	100	99.123	Callithrix_jacchus
ENSOCUG00000027756	-	100	95.029	ENSCAFG00000004735	-	100	99.708	Canis_familiaris
ENSOCUG00000027756	-	100	95.029	ENSCAFG00020007712	-	100	99.708	Canis_lupus_dingo
ENSOCUG00000027756	-	100	94.737	ENSCHIG00000000499	-	100	99.415	Capra_hircus
ENSOCUG00000027756	-	100	94.737	ENSTSYG00000003517	-	100	98.830	Carlito_syrichta
ENSOCUG00000027756	-	100	95.614	ENSCPOG00000021069	-	100	99.708	Cavia_porcellus
ENSOCUG00000027756	-	100	95.029	ENSCCAG00000036822	-	100	99.123	Cebus_capucinus
ENSOCUG00000027756	-	100	84.503	ENSCATG00000016633	-	100	88.596	Cercocebus_atys
ENSOCUG00000027756	-	100	94.737	ENSCLAG00000011770	-	100	99.415	Chinchilla_lanigera
ENSOCUG00000027756	-	100	93.162	ENSCSAG00000013109	-	100	97.151	Chlorocebus_sabaeus
ENSOCUG00000027756	-	96	89.736	ENSCPBG00000003100	-	100	89.607	Chrysemys_picta_bellii
ENSOCUG00000027756	-	93	55.346	ENSCING00000020481	-	97	54.412	Ciona_intestinalis
ENSOCUG00000027756	-	93	55.556	ENSCSAVG00000010546	-	99	54.070	Ciona_savignyi
ENSOCUG00000027756	-	100	95.322	ENSCANG00000034900	-	100	99.415	Colobus_angolensis_palliatus
ENSOCUG00000027756	-	100	95.029	ENSCGRG00001023665	Prpf18	100	99.123	Cricetulus_griseus_chok1gshd
ENSOCUG00000027756	-	100	95.029	ENSCGRG00000014690	Prpf18	100	99.123	Cricetulus_griseus_crigri
ENSOCUG00000027756	-	97	83.384	ENSCSEG00000005536	prpf18	99	82.749	Cynoglossus_semilaevis
ENSOCUG00000027756	-	96	85.015	ENSCVAG00000012401	prpf18	100	84.211	Cyprinodon_variegatus
ENSOCUG00000027756	-	96	85.627	ENSDARG00000058306	prpf18	100	84.795	Danio_rerio
ENSOCUG00000027756	-	100	95.029	ENSDNOG00000035607	-	100	99.123	Dasypus_novemcinctus
ENSOCUG00000027756	-	100	94.737	ENSDORG00000000858	Prpf18	100	99.415	Dipodomys_ordii
ENSOCUG00000027756	-	94	50.625	FBgn0027784	Prp18	98	51.032	Drosophila_melanogaster
ENSOCUG00000027756	-	86	94.898	ENSETEG00000015060	-	100	87.427	Echinops_telfairi
ENSOCUG00000027756	-	96	66.867	ENSEBUG00000016502	prpf18	99	65.706	Eptatretus_burgeri
ENSOCUG00000027756	-	100	95.322	ENSEASG00005019373	-	100	99.415	Equus_asinus_asinus
ENSOCUG00000027756	-	100	95.322	ENSECAG00000006997	PRPF18	100	99.415	Equus_caballus
ENSOCUG00000027756	-	92	58.228	ENSEEUG00000001171	-	100	63.291	Erinaceus_europaeus
ENSOCUG00000027756	-	96	82.927	ENSELUG00000022190	prpf18	100	82.216	Esox_lucius
ENSOCUG00000027756	-	100	94.737	ENSFCAG00000004436	-	100	99.415	Felis_catus
ENSOCUG00000027756	-	88	88.782	ENSFALG00000001912	-	97	88.923	Ficedula_albicollis
ENSOCUG00000027756	-	90	67.949	ENSFDAG00000010713	-	97	64.928	Fukomys_damarensis
ENSOCUG00000027756	-	94	99.375	ENSFDAG00000014026	-	100	99.375	Fukomys_damarensis
ENSOCUG00000027756	-	80	89.377	ENSFHEG00000020125	prpf18	98	89.513	Fundulus_heteroclitus
ENSOCUG00000027756	-	95	80.368	ENSGMOG00000012210	prpf18	99	80.059	Gadus_morhua
ENSOCUG00000027756	-	96	93.272	ENSGALG00000043593	-	100	92.105	Gallus_gallus
ENSOCUG00000027756	-	96	83.792	ENSGAFG00000006034	prpf18	100	83.041	Gambusia_affinis
ENSOCUG00000027756	-	96	82.263	ENSGACG00000012232	prpf18	100	81.579	Gasterosteus_aculeatus
ENSOCUG00000027756	-	96	93.272	ENSGAGG00000016878	-	100	92.398	Gopherus_agassizii
ENSOCUG00000027756	-	92	95.253	ENSGGOG00000025188	-	96	99.684	Gorilla_gorilla
ENSOCUG00000027756	-	96	85.321	ENSHBUG00000010264	prpf18	100	84.795	Haplochromis_burtoni
ENSOCUG00000027756	-	100	95.029	ENSHGLG00000018534	PRPF18	100	99.708	Heterocephalus_glaber_female
ENSOCUG00000027756	-	94	99.688	ENSHGLG00100012161	-	98	99.688	Heterocephalus_glaber_male
ENSOCUG00000027756	-	96	85.015	ENSHCOG00000015987	prpf18	100	84.211	Hippocampus_comes
ENSOCUG00000027756	-	96	82.544	ENSIPUG00000007432	prpf18	100	82.720	Ictalurus_punctatus
ENSOCUG00000027756	-	96	97.554	ENSSTOG00000008735	-	100	97.953	Ictidomys_tridecemlineatus
ENSOCUG00000027756	-	91	74.277	ENSJJAG00000015191	-	100	72.334	Jaculus_jaculus
ENSOCUG00000027756	-	100	95.614	ENSJJAG00000024041	-	100	99.708	Jaculus_jaculus
ENSOCUG00000027756	-	96	84.098	ENSKMAG00000012124	prpf18	100	83.041	Kryptolebias_marmoratus
ENSOCUG00000027756	-	96	85.714	ENSLBEG00000028466	prpf18	99	83.728	Labrus_bergylta
ENSOCUG00000027756	-	94	89.375	ENSLACG00000009885	prpf18	100	86.550	Latimeria_chalumnae
ENSOCUG00000027756	-	96	91.437	ENSLOCG00000016736	prpf18	100	90.351	Lepisosteus_oculatus
ENSOCUG00000027756	-	100	95.614	ENSLAFG00000007753	-	100	99.708	Loxodonta_africana
ENSOCUG00000027756	-	100	95.614	ENSMFAG00000000540	-	100	99.708	Macaca_fascicularis
ENSOCUG00000027756	-	100	95.614	ENSMMUG00000015071	PRPF18	100	99.708	Macaca_mulatta
ENSOCUG00000027756	-	100	95.614	ENSMNEG00000024679	-	100	99.708	Macaca_nemestrina
ENSOCUG00000027756	-	100	80.409	ENSMLEG00000031715	-	100	84.503	Mandrillus_leucophaeus
ENSOCUG00000027756	-	96	84.404	ENSMAMG00000006610	prpf18	100	83.333	Mastacembelus_armatus
ENSOCUG00000027756	-	96	85.321	ENSMZEG00005019392	prpf18	100	84.795	Maylandia_zebra
ENSOCUG00000027756	-	96	93.272	ENSMGAG00000005023	-	100	92.105	Meleagris_gallopavo
ENSOCUG00000027756	-	100	95.322	ENSMICG00000006572	-	100	99.415	Microcebus_murinus
ENSOCUG00000027756	-	100	95.614	ENSMOCG00000021468	Prpf18	100	99.708	Microtus_ochrogaster
ENSOCUG00000027756	-	96	84.098	ENSMMOG00000013012	prpf18	100	83.041	Mola_mola
ENSOCUG00000027756	-	92	91.022	ENSMODG00000016902	-	92	90.828	Monodelphis_domestica
ENSOCUG00000027756	-	96	86.239	ENSMODG00000024043	-	100	85.673	Monodelphis_domestica
ENSOCUG00000027756	-	86	86.441	ENSMALG00000005486	prpf18	100	78.286	Monopterus_albus
ENSOCUG00000027756	-	100	95.029	MGP_CAROLIEiJ_G0023143	Prpf18	100	100.000	Mus_caroli
ENSOCUG00000027756	-	100	94.737	ENSMUSG00000039449	Prpf18	100	100.000	Mus_musculus
ENSOCUG00000027756	-	100	95.322	MGP_PahariEiJ_G0019203	Prpf18	100	100.000	Mus_pahari
ENSOCUG00000027756	-	100	94.444	MGP_SPRETEiJ_G0024061	Prpf18	100	100.000	Mus_spretus
ENSOCUG00000027756	-	100	94.737	ENSMPUG00000000938	-	100	99.415	Mustela_putorius_furo
ENSOCUG00000027756	-	100	94.737	ENSMLUG00000009200	-	100	98.830	Myotis_lucifugus
ENSOCUG00000027756	-	100	95.322	ENSNGAG00000012500	-	100	99.123	Nannospalax_galili
ENSOCUG00000027756	-	67	92.174	ENSNGAG00000023550	-	82	92.174	Nannospalax_galili
ENSOCUG00000027756	-	96	85.321	ENSNBRG00000001778	prpf18	100	84.795	Neolamprologus_brichardi
ENSOCUG00000027756	-	100	95.614	ENSNLEG00000012186	-	100	99.708	Nomascus_leucogenys
ENSOCUG00000027756	-	76	79.923	ENSMEUG00000005032	-	75	79.923	Notamacropus_eugenii
ENSOCUG00000027756	-	77	75.849	ENSOPRG00000002153	-	100	81.132	Ochotona_princeps
ENSOCUG00000027756	-	100	94.737	ENSODEG00000003770	-	100	98.830	Octodon_degus
ENSOCUG00000027756	-	94	84.688	ENSONIG00000014854	prpf18	96	84.179	Oreochromis_niloticus
ENSOCUG00000027756	-	95	96.012	ENSOANG00000015404	-	100	95.029	Ornithorhynchus_anatinus
ENSOCUG00000027756	-	96	82.985	ENSORLG00000010293	prpf18	100	82.000	Oryzias_latipes
ENSOCUG00000027756	-	96	85.321	ENSORLG00020001530	prpf18	100	84.211	Oryzias_latipes_hni
ENSOCUG00000027756	-	96	85.321	ENSORLG00015013705	prpf18	100	84.503	Oryzias_latipes_hsok
ENSOCUG00000027756	-	96	86.239	ENSOMEG00000009167	prpf18	100	85.380	Oryzias_melastigma
ENSOCUG00000027756	-	100	94.737	ENSOGAG00000007294	-	100	99.123	Otolemur_garnettii
ENSOCUG00000027756	-	98	96.119	ENSOARG00000006243	-	100	96.866	Ovis_aries
ENSOCUG00000027756	-	100	95.614	ENSPPAG00000041959	-	100	99.708	Pan_paniscus
ENSOCUG00000027756	-	100	94.737	ENSPPRG00000000107	-	100	99.415	Panthera_pardus
ENSOCUG00000027756	-	100	94.737	ENSPTIG00000021094	-	100	99.123	Panthera_tigris_altaica
ENSOCUG00000027756	-	100	95.614	ENSPTRG00000002306	PRPF18	100	99.708	Pan_troglodytes
ENSOCUG00000027756	-	100	95.322	ENSPANG00000023346	-	100	99.415	Papio_anubis
ENSOCUG00000027756	-	100	80.627	ENSPKIG00000014128	prpf18	96	82.051	Paramormyrops_kingsleyae
ENSOCUG00000027756	-	93	95.298	ENSPSIG00000016064	-	100	92.690	Pelodiscus_sinensis
ENSOCUG00000027756	-	96	78.593	ENSPMGG00000016486	prpf18	100	78.363	Periophthalmus_magnuspinnatus
ENSOCUG00000027756	-	100	95.322	ENSPEMG00000013704	Prpf18	100	99.415	Peromyscus_maniculatus_bairdii
ENSOCUG00000027756	-	96	74.320	ENSPMAG00000000204	prpf18	100	74.277	Petromyzon_marinus
ENSOCUG00000027756	-	88	97.010	ENSPCIG00000012963	-	99	96.519	Phascolarctos_cinereus
ENSOCUG00000027756	-	96	82.388	ENSPFOG00000017611	prpf18	100	81.714	Poecilia_formosa
ENSOCUG00000027756	-	96	84.098	ENSPLAG00000000369	prpf18	100	83.333	Poecilia_latipinna
ENSOCUG00000027756	-	96	84.098	ENSPMEG00000005183	prpf18	100	83.333	Poecilia_mexicana
ENSOCUG00000027756	-	96	83.486	ENSPREG00000015232	prpf18	100	82.749	Poecilia_reticulata
ENSOCUG00000027756	-	100	95.322	ENSPPYG00000002101	PRPF18	100	99.415	Pongo_abelii
ENSOCUG00000027756	-	100	76.608	ENSPCAG00000010833	-	100	80.702	Procavia_capensis
ENSOCUG00000027756	-	86	100.000	ENSPCOG00000013057	-	93	100.000	Propithecus_coquereli
ENSOCUG00000027756	-	100	57.018	ENSPVAG00000002947	-	100	61.111	Pteropus_vampyrus
ENSOCUG00000027756	-	96	85.321	ENSPNYG00000003554	prpf18	100	84.795	Pundamilia_nyererei
ENSOCUG00000027756	-	96	86.012	ENSPNAG00000023151	prpf18	100	85.185	Pygocentrus_nattereri
ENSOCUG00000027756	-	100	94.444	ENSRNOG00000018396	Prpf18	100	98.538	Rattus_norvegicus
ENSOCUG00000027756	-	100	95.029	ENSRBIG00000028028	-	100	99.123	Rhinopithecus_bieti
ENSOCUG00000027756	-	100	95.322	ENSRROG00000040695	-	100	99.415	Rhinopithecus_roxellana
ENSOCUG00000027756	-	100	95.029	ENSSBOG00000034482	-	100	99.123	Saimiri_boliviensis_boliviensis
ENSOCUG00000027756	-	96	96.942	ENSSHAG00000016463	-	100	96.491	Sarcophilus_harrisii
ENSOCUG00000027756	-	96	77.370	ENSSHAG00000009669	-	100	77.485	Sarcophilus_harrisii
ENSOCUG00000027756	-	94	82.121	ENSSFOG00015022118	prpf18	100	76.657	Scleropages_formosus
ENSOCUG00000027756	-	77	44.528	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSOCUG00000027756	-	96	84.098	ENSSMAG00000005308	prpf18	100	83.041	Scophthalmus_maximus
ENSOCUG00000027756	-	96	85.933	ENSSDUG00000015428	prpf18	100	85.088	Seriola_dumerili
ENSOCUG00000027756	-	96	85.933	ENSSLDG00000023989	prpf18	100	85.088	Seriola_lalandi_dorsalis
ENSOCUG00000027756	-	100	64.620	ENSSARG00000005307	-	100	69.298	Sorex_araneus
ENSOCUG00000027756	-	93	95.298	ENSSPUG00000002619	-	100	92.398	Sphenodon_punctatus
ENSOCUG00000027756	-	96	85.321	ENSSPAG00000019502	prpf18	100	84.503	Stegastes_partitus
ENSOCUG00000027756	-	100	95.029	ENSSSCG00000026354	-	100	99.708	Sus_scrofa
ENSOCUG00000027756	-	93	94.671	ENSTGUG00000002286	-	100	92.105	Taeniopygia_guttata
ENSOCUG00000027756	-	97	82.477	ENSTRUG00000011278	prpf18	100	82.164	Takifugu_rubripes
ENSOCUG00000027756	-	97	82.477	ENSTNIG00000000911	prpf18	100	81.871	Tetraodon_nigroviridis
ENSOCUG00000027756	-	67	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSOCUG00000027756	-	100	95.322	ENSTTRG00000011117	PRPF18	100	99.415	Tursiops_truncatus
ENSOCUG00000027756	-	91	99.678	ENSUAMG00000001815	-	93	99.678	Ursus_americanus
ENSOCUG00000027756	-	100	90.058	ENSUMAG00000012329	-	100	94.737	Ursus_maritimus
ENSOCUG00000027756	-	100	89.474	ENSVPAG00000011486	-	100	93.567	Vicugna_pacos
ENSOCUG00000027756	-	100	95.029	ENSVVUG00000005453	-	100	99.708	Vulpes_vulpes
ENSOCUG00000027756	-	93	82.555	ENSXETG00000024057	prpf18	100	80.290	Xenopus_tropicalis
ENSOCUG00000027756	-	96	83.283	ENSXCOG00000020414	prpf18	100	82.558	Xiphophorus_couchianus
ENSOCUG00000027756	-	96	83.792	ENSXMAG00000004713	prpf18	92	82.370	Xiphophorus_maculatus