EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOCUG00000027885 (Gene tree)
Gene ID: 100351049
Gene Symbol: RPUSD3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 4666 bases
Position: chrGL018802:342057-346722
Accession: 28437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000021818	PseudoU_synth_2	PF00849.22	6.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000030850	RPUSD3-201	1026	-	ENSOCUP00000021818	342 (aa)	-	G1TXL6

Gene Model

Click here to download ENSOCUG00000027885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000027885's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000027885	RPUSD3	99	69.164	ENSG00000156990	RPUSD3	95	74.359	Homo_sapiens
ENSOCUG00000027885	RPUSD3	100	66.952	ENSAMEG00000016227	RPUSD3	98	66.952	Ailuropoda_melanoleuca
ENSOCUG00000027885	RPUSD3	85	47.619	ENSACAG00000009836	RPUSD3	81	47.619	Anolis_carolinensis
ENSOCUG00000027885	RPUSD3	54	76.757	ENSANAG00000038118	-	88	76.757	Aotus_nancymaae
ENSOCUG00000027885	RPUSD3	75	48.913	ENSANAG00000007127	-	89	56.545	Aotus_nancymaae
ENSOCUG00000027885	RPUSD3	62	71.889	ENSANAG00000019945	-	87	71.889	Aotus_nancymaae
ENSOCUG00000027885	RPUSD3	100	67.806	ENSBTAG00000007968	RPUSD3	100	67.806	Bos_taurus
ENSOCUG00000027885	RPUSD3	100	67.236	ENSCAFG00000029733	RPUSD3	98	67.236	Canis_familiaris
ENSOCUG00000027885	RPUSD3	100	67.236	ENSCAFG00020008582	RPUSD3	98	67.236	Canis_lupus_dingo
ENSOCUG00000027885	RPUSD3	100	67.246	ENSCHIG00000026027	RPUSD3	100	67.246	Capra_hircus
ENSOCUG00000027885	RPUSD3	100	63.764	ENSTSYG00000009994	RPUSD3	99	63.764	Carlito_syrichta
ENSOCUG00000027885	RPUSD3	78	66.543	ENSCAPG00000017559	RPUSD3	99	66.543	Cavia_aperea
ENSOCUG00000027885	RPUSD3	99	60.177	ENSCPOG00000037956	RPUSD3	89	60.177	Cavia_porcellus
ENSOCUG00000027885	RPUSD3	100	66.667	ENSCCAG00000029530	RPUSD3	87	80.000	Cebus_capucinus
ENSOCUG00000027885	RPUSD3	99	67.529	ENSCATG00000036939	RPUSD3	89	79.474	Cercocebus_atys
ENSOCUG00000027885	RPUSD3	100	66.952	ENSCSAG00000010506	RPUSD3	98	66.952	Chlorocebus_sabaeus
ENSOCUG00000027885	RPUSD3	51	78.571	ENSCHOG00000010151	-	67	78.571	Choloepus_hoffmanni
ENSOCUG00000027885	RPUSD3	76	48.485	ENSCPBG00000008825	RPUSD3	95	49.434	Chrysemys_picta_bellii
ENSOCUG00000027885	RPUSD3	99	67.816	ENSCANG00000040711	RPUSD3	89	79.365	Colobus_angolensis_palliatus
ENSOCUG00000027885	RPUSD3	96	62.059	ENSCGRG00001004923	Rpusd3	93	61.516	Cricetulus_griseus_chok1gshd
ENSOCUG00000027885	RPUSD3	96	62.059	ENSCGRG00000018315	Rpusd3	97	62.059	Cricetulus_griseus_crigri
ENSOCUG00000027885	RPUSD3	97	63.953	ENSDNOG00000039160	RPUSD3	89	63.953	Dasypus_novemcinctus
ENSOCUG00000027885	RPUSD3	77	63.235	ENSDORG00000026827	Rpusd3	92	63.235	Dipodomys_ordii
ENSOCUG00000027885	RPUSD3	100	61.932	ENSETEG00000006538	RPUSD3	97	61.517	Echinops_telfairi
ENSOCUG00000027885	RPUSD3	68	33.193	ENSEBUG00000015605	RPUSD3	75	33.193	Eptatretus_burgeri
ENSOCUG00000027885	RPUSD3	100	66.573	ENSEASG00005014160	RPUSD3	96	66.573	Equus_asinus_asinus
ENSOCUG00000027885	RPUSD3	100	66.854	ENSECAG00000019988	RPUSD3	96	66.854	Equus_caballus
ENSOCUG00000027885	RPUSD3	99	46.479	ENSEEUG00000007353	RPUSD3	98	46.479	Erinaceus_europaeus
ENSOCUG00000027885	RPUSD3	100	67.236	ENSFCAG00000014199	RPUSD3	98	67.236	Felis_catus
ENSOCUG00000027885	RPUSD3	80	44.643	ENSFALG00000012968	RPUSD3	99	42.143	Ficedula_albicollis
ENSOCUG00000027885	RPUSD3	78	67.159	ENSFDAG00000008350	RPUSD3	85	65.141	Fukomys_damarensis
ENSOCUG00000027885	RPUSD3	78	50.000	ENSGAGG00000007493	RPUSD3	82	50.923	Gopherus_agassizii
ENSOCUG00000027885	RPUSD3	99	68.588	ENSGGOG00000013120	RPUSD3	89	80.526	Gorilla_gorilla
ENSOCUG00000027885	RPUSD3	96	55.497	ENSHGLG00000011722	RPUSD3	97	55.497	Heterocephalus_glaber_female
ENSOCUG00000027885	RPUSD3	96	55.497	ENSHGLG00100016038	RPUSD3	97	55.497	Heterocephalus_glaber_male
ENSOCUG00000027885	RPUSD3	100	64.286	ENSSTOG00000002125	RPUSD3	98	64.286	Ictidomys_tridecemlineatus
ENSOCUG00000027885	RPUSD3	97	61.176	ENSJJAG00000012679	Rpusd3	97	61.176	Jaculus_jaculus
ENSOCUG00000027885	RPUSD3	100	65.156	ENSLAFG00000017501	RPUSD3	100	65.156	Loxodonta_africana
ENSOCUG00000027885	RPUSD3	99	67.529	ENSMFAG00000032407	RPUSD3	97	67.529	Macaca_fascicularis
ENSOCUG00000027885	RPUSD3	99	63.506	ENSMMUG00000010628	RPUSD3	88	77.228	Macaca_mulatta
ENSOCUG00000027885	RPUSD3	99	67.241	ENSMNEG00000040308	RPUSD3	97	67.241	Macaca_nemestrina
ENSOCUG00000027885	RPUSD3	99	67.529	ENSMLEG00000033940	RPUSD3	89	80.000	Mandrillus_leucophaeus
ENSOCUG00000027885	RPUSD3	97	61.988	ENSMAUG00000015473	Rpusd3	97	61.988	Mesocricetus_auratus
ENSOCUG00000027885	RPUSD3	100	65.429	ENSMICG00000002315	RPUSD3	91	76.382	Microcebus_murinus
ENSOCUG00000027885	RPUSD3	100	60.057	ENSMOCG00000022613	Rpusd3	100	60.057	Microtus_ochrogaster
ENSOCUG00000027885	RPUSD3	87	52.000	ENSMODG00000005210	RPUSD3	77	52.000	Monodelphis_domestica
ENSOCUG00000027885	RPUSD3	100	60.114	MGP_CAROLIEiJ_G0028725	Rpusd3	100	60.114	Mus_caroli
ENSOCUG00000027885	RPUSD3	100	59.829	ENSMUSG00000051169	Rpusd3	100	59.829	Mus_musculus
ENSOCUG00000027885	RPUSD3	100	60.114	MGP_PahariEiJ_G0022476	Rpusd3	100	60.114	Mus_pahari
ENSOCUG00000027885	RPUSD3	100	59.259	MGP_SPRETEiJ_G0029753	Rpusd3	100	59.259	Mus_spretus
ENSOCUG00000027885	RPUSD3	100	64.957	ENSMPUG00000017132	RPUSD3	98	64.957	Mustela_putorius_furo
ENSOCUG00000027885	RPUSD3	100	68.195	ENSMLUG00000006135	RPUSD3	99	68.195	Myotis_lucifugus
ENSOCUG00000027885	RPUSD3	99	58.944	ENSNGAG00000023704	Rpusd3	99	59.942	Nannospalax_galili
ENSOCUG00000027885	RPUSD3	99	62.899	ENSNLEG00000004214	RPUSD3	89	80.000	Nomascus_leucogenys
ENSOCUG00000027885	RPUSD3	77	55.597	ENSMEUG00000013098	-	100	55.597	Notamacropus_eugenii
ENSOCUG00000027885	RPUSD3	96	57.522	ENSOPRG00000002300	RPUSD3	95	57.522	Ochotona_princeps
ENSOCUG00000027885	RPUSD3	78	65.299	ENSODEG00000018137	RPUSD3	91	65.299	Octodon_degus
ENSOCUG00000027885	RPUSD3	84	47.079	ENSOANG00000012081	-	99	46.392	Ornithorhynchus_anatinus
ENSOCUG00000027885	RPUSD3	88	68.750	ENSOGAG00000012592	RPUSD3	95	68.750	Otolemur_garnettii
ENSOCUG00000027885	RPUSD3	100	67.236	ENSOARG00000005928	RPUSD3	98	67.236	Ovis_aries
ENSOCUG00000027885	RPUSD3	100	67.714	ENSPPAG00000038083	RPUSD3	89	79.474	Pan_paniscus
ENSOCUG00000027885	RPUSD3	100	67.806	ENSPPRG00000024433	RPUSD3	98	67.806	Panthera_pardus
ENSOCUG00000027885	RPUSD3	100	68.946	ENSPTIG00000006828	RPUSD3	100	68.946	Panthera_tigris_altaica
ENSOCUG00000027885	RPUSD3	100	67.714	ENSPTRG00000051760	RPUSD3	89	79.474	Pan_troglodytes
ENSOCUG00000027885	RPUSD3	100	67.521	ENSPANG00000023885	RPUSD3	89	80.000	Papio_anubis
ENSOCUG00000027885	RPUSD3	100	59.829	ENSPEMG00000017245	Rpusd3	100	59.829	Peromyscus_maniculatus_bairdii
ENSOCUG00000027885	RPUSD3	85	53.559	ENSPCIG00000021901	RPUSD3	84	53.559	Phascolarctos_cinereus
ENSOCUG00000027885	RPUSD3	100	69.914	ENSPPYG00000013676	RPUSD3	98	69.914	Pongo_abelii
ENSOCUG00000027885	RPUSD3	68	51.477	ENSPCAG00000013731	-	82	51.477	Procavia_capensis
ENSOCUG00000027885	RPUSD3	100	66.667	ENSPCOG00000018314	RPUSD3	98	66.667	Propithecus_coquereli
ENSOCUG00000027885	RPUSD3	100	65.057	ENSPVAG00000011107	RPUSD3	98	65.057	Pteropus_vampyrus
ENSOCUG00000027885	RPUSD3	100	57.681	ENSRNOG00000009084	Rpusd3	100	57.681	Rattus_norvegicus
ENSOCUG00000027885	RPUSD3	99	67.529	ENSRBIG00000041230	RPUSD3	89	79.474	Rhinopithecus_bieti
ENSOCUG00000027885	RPUSD3	99	67.529	ENSRROG00000043328	RPUSD3	89	79.474	Rhinopithecus_roxellana
ENSOCUG00000027885	RPUSD3	99	67.714	ENSSBOG00000036106	RPUSD3	97	67.714	Saimiri_boliviensis_boliviensis
ENSOCUG00000027885	RPUSD3	86	52.013	ENSSHAG00000015536	RPUSD3	94	52.013	Sarcophilus_harrisii
ENSOCUG00000027885	RPUSD3	100	63.714	ENSSSCG00000011555	RPUSD3	98	63.610	Sus_scrofa
ENSOCUG00000027885	RPUSD3	69	46.250	ENSTGUG00000008744	RPUSD3	93	45.536	Taeniopygia_guttata
ENSOCUG00000027885	RPUSD3	71	68.800	ENSTBEG00000000176	RPUSD3	86	67.717	Tupaia_belangeri
ENSOCUG00000027885	RPUSD3	100	65.057	ENSTTRG00000007544	RPUSD3	98	65.057	Tursiops_truncatus
ENSOCUG00000027885	RPUSD3	89	70.358	ENSUAMG00000011354	RPUSD3	93	70.358	Ursus_americanus
ENSOCUG00000027885	RPUSD3	100	67.236	ENSUMAG00000018830	RPUSD3	98	67.236	Ursus_maritimus
ENSOCUG00000027885	RPUSD3	100	67.806	ENSVVUG00000023735	RPUSD3	100	67.806	Vulpes_vulpes
ENSOCUG00000027885	RPUSD3	83	46.690	ENSXETG00000023546	rpusd3	99	46.690	Xenopus_tropicalis