EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000027889 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 585 bases
Position: chrAAGW02079242:70262-70846
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000022480	AD	PF09793.9	2.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000028879	-	585	-	ENSOCUP00000022480	194 (aa)	-	G1TZF8

Gene Model

Click here to download ENSOCUG00000027889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000027889's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000027889	-	100	91.371	ENSOCUG00000008566	-	99	91.371
ENSOCUG00000027889	-	100	92.784	ENSOCUG00000024823	-	100	92.784
ENSOCUG00000027889	-	100	92.784	ENSOCUG00000021254	-	100	92.784

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000027889	-	100	93.299	ENSG00000161654	LSM12	99	93.299	Homo_sapiens
ENSOCUG00000027889	-	100	80.513	ENSAPOG00000007907	lsm12b	99	80.513	Acanthochromis_polyacanthus
ENSOCUG00000027889	-	100	91.371	ENSAMEG00000018321	LSM12	99	91.371	Ailuropoda_melanoleuca
ENSOCUG00000027889	-	100	78.974	ENSACIG00000008538	lsm12b	99	78.974	Amphilophus_citrinellus
ENSOCUG00000027889	-	100	80.000	ENSAOCG00000021847	lsm12b	87	80.000	Amphiprion_ocellaris
ENSOCUG00000027889	-	100	80.000	ENSAPEG00000002252	lsm12b	99	80.000	Amphiprion_percula
ENSOCUG00000027889	-	100	79.487	ENSATEG00000005705	lsm12b	99	79.487	Anabas_testudineus
ENSOCUG00000027889	-	100	88.660	ENSACAG00000004618	LSM12	99	88.660	Anolis_carolinensis
ENSOCUG00000027889	-	100	93.299	ENSANAG00000029011	LSM12	99	93.636	Aotus_nancymaae
ENSOCUG00000027889	-	100	79.487	ENSACLG00000026332	lsm12b	99	79.487	Astatotilapia_calliptera
ENSOCUG00000027889	-	100	75.385	ENSAMXG00000036117	lsm12a	91	75.385	Astyanax_mexicanus
ENSOCUG00000027889	-	100	78.974	ENSAMXG00000032952	lsm12b	99	78.974	Astyanax_mexicanus
ENSOCUG00000027889	-	100	93.299	ENSBTAG00000016252	LSM12	99	93.299	Bos_taurus
ENSOCUG00000027889	-	100	93.299	ENSCJAG00000048480	LSM12	99	93.636	Callithrix_jacchus
ENSOCUG00000027889	-	100	93.299	ENSCAFG00000014379	LSM12	91	93.299	Canis_familiaris
ENSOCUG00000027889	-	100	93.299	ENSCAFG00020012173	LSM12	99	93.299	Canis_lupus_dingo
ENSOCUG00000027889	-	100	93.299	ENSCHIG00000018175	LSM12	99	93.299	Capra_hircus
ENSOCUG00000027889	-	100	93.299	ENSTSYG00000036361	LSM12	99	93.299	Carlito_syrichta
ENSOCUG00000027889	-	83	89.441	ENSCAPG00000009647	LSM12	88	89.441	Cavia_aperea
ENSOCUG00000027889	-	100	91.237	ENSCPOG00000012860	LSM12	99	93.519	Cavia_porcellus
ENSOCUG00000027889	-	100	93.299	ENSCCAG00000032905	LSM12	99	93.636	Cebus_capucinus
ENSOCUG00000027889	-	100	93.299	ENSCATG00000030577	-	99	93.636	Cercocebus_atys
ENSOCUG00000027889	-	100	92.268	ENSCLAG00000015759	LSM12	99	92.268	Chinchilla_lanigera
ENSOCUG00000027889	-	100	92.784	ENSCSAG00000003486	LSM12	99	92.784	Chlorocebus_sabaeus
ENSOCUG00000027889	-	56	94.444	ENSCHOG00000001198	LSM12	99	94.444	Choloepus_hoffmanni
ENSOCUG00000027889	-	100	87.629	ENSCPBG00000027105	LSM12	99	87.629	Chrysemys_picta_bellii
ENSOCUG00000027889	-	100	93.299	ENSCANG00000043328	LSM12	99	93.636	Colobus_angolensis_palliatus
ENSOCUG00000027889	-	100	93.299	ENSCGRG00001002094	Lsm12	99	93.636	Cricetulus_griseus_chok1gshd
ENSOCUG00000027889	-	79	94.771	ENSCGRG00000004316	Lsm12	86	94.771	Cricetulus_griseus_crigri
ENSOCUG00000027889	-	100	78.974	ENSCSEG00000008434	lsm12b	99	78.974	Cynoglossus_semilaevis
ENSOCUG00000027889	-	100	78.974	ENSCVAG00000008755	lsm12b	99	78.974	Cyprinodon_variegatus
ENSOCUG00000027889	-	100	72.308	ENSDARG00000028848	lsm12a	99	72.308	Danio_rerio
ENSOCUG00000027889	-	100	79.487	ENSDARG00000109510	lsm12b	99	79.487	Danio_rerio
ENSOCUG00000027889	-	100	92.784	ENSDNOG00000002418	LSM12	91	92.784	Dasypus_novemcinctus
ENSOCUG00000027889	-	100	93.299	ENSDORG00000016381	Lsm12	99	93.636	Dipodomys_ordii
ENSOCUG00000027889	-	74	31.013	FBgn0036057	CG14164	83	31.013	Drosophila_melanogaster
ENSOCUG00000027889	-	84	33.735	FBgn0030364	Lsm12	76	33.735	Drosophila_melanogaster
ENSOCUG00000027889	-	90	83.333	ENSETEG00000011012	-	99	83.333	Echinops_telfairi
ENSOCUG00000027889	-	100	93.299	ENSETEG00000008374	LSM12	99	93.299	Echinops_telfairi
ENSOCUG00000027889	-	86	60.843	ENSEBUG00000016299	lsm12a	92	60.843	Eptatretus_burgeri
ENSOCUG00000027889	-	100	93.299	ENSEASG00005010155	LSM12	99	93.299	Equus_asinus_asinus
ENSOCUG00000027889	-	100	93.299	ENSECAG00000009071	LSM12	99	93.636	Equus_caballus
ENSOCUG00000027889	-	78	93.421	ENSEEUG00000002419	-	99	93.421	Erinaceus_europaeus
ENSOCUG00000027889	-	100	76.923	ENSELUG00000000256	-	99	76.923	Esox_lucius
ENSOCUG00000027889	-	100	78.974	ENSELUG00000015538	lsm12b	99	74.359	Esox_lucius
ENSOCUG00000027889	-	100	93.299	ENSFCAG00000037021	LSM12	99	93.299	Felis_catus
ENSOCUG00000027889	-	76	93.878	ENSFDAG00000008954	LSM12	86	93.878	Fukomys_damarensis
ENSOCUG00000027889	-	100	77.949	ENSFHEG00000019913	lsm12b	99	77.949	Fundulus_heteroclitus
ENSOCUG00000027889	-	81	79.618	ENSGMOG00000015449	lsm12b	99	79.618	Gadus_morhua
ENSOCUG00000027889	-	78	90.132	ENSGALG00000039803	LSM12	99	90.132	Gallus_gallus
ENSOCUG00000027889	-	100	78.462	ENSGAFG00000011829	lsm12b	99	78.462	Gambusia_affinis
ENSOCUG00000027889	-	81	80.892	ENSGACG00000003428	lsm12b	99	80.892	Gasterosteus_aculeatus
ENSOCUG00000027889	-	100	88.660	ENSGAGG00000021965	LSM12	99	88.660	Gopherus_agassizii
ENSOCUG00000027889	-	100	93.299	ENSGGOG00000010589	-	99	93.636	Gorilla_gorilla
ENSOCUG00000027889	-	86	80.838	ENSHBUG00000007667	lsm12b	74	80.838	Haplochromis_burtoni
ENSOCUG00000027889	-	100	93.299	ENSHGLG00000011411	LSM12	99	93.636	Heterocephalus_glaber_female
ENSOCUG00000027889	-	79	94.118	ENSHGLG00100000241	LSM12	81	94.118	Heterocephalus_glaber_male
ENSOCUG00000027889	-	100	78.462	ENSHCOG00000002094	lsm12b	99	78.462	Hippocampus_comes
ENSOCUG00000027889	-	99	71.649	ENSIPUG00000008936	lsm12a	99	71.649	Ictalurus_punctatus
ENSOCUG00000027889	-	100	79.487	ENSIPUG00000014800	lsm12	99	79.487	Ictalurus_punctatus
ENSOCUG00000027889	-	100	93.299	ENSSTOG00000007403	LSM12	99	93.636	Ictidomys_tridecemlineatus
ENSOCUG00000027889	-	81	80.503	ENSJJAG00000014652	-	95	80.503	Jaculus_jaculus
ENSOCUG00000027889	-	100	92.268	ENSJJAG00000004364	-	99	92.727	Jaculus_jaculus
ENSOCUG00000027889	-	97	82.540	ENSJJAG00000011793	-	99	82.540	Jaculus_jaculus
ENSOCUG00000027889	-	86	81.437	ENSKMAG00000007704	lsm12b	56	81.437	Kryptolebias_marmoratus
ENSOCUG00000027889	-	100	80.000	ENSLBEG00000027999	lsm12b	99	80.000	Labrus_bergylta
ENSOCUG00000027889	-	100	85.052	ENSLACG00000015981	LSM12	99	85.052	Latimeria_chalumnae
ENSOCUG00000027889	-	100	78.974	ENSLOCG00000013079	lsm12b	99	78.974	Lepisosteus_oculatus
ENSOCUG00000027889	-	100	93.299	ENSLAFG00000005202	LSM12	99	93.299	Loxodonta_africana
ENSOCUG00000027889	-	100	93.299	ENSMFAG00000031376	LSM12	99	93.636	Macaca_fascicularis
ENSOCUG00000027889	-	84	82.558	ENSMMUG00000038408	-	99	82.558	Macaca_mulatta
ENSOCUG00000027889	-	100	93.299	ENSMMUG00000006804	LSM12	99	93.636	Macaca_mulatta
ENSOCUG00000027889	-	84	82.558	ENSMMUG00000042106	-	99	82.558	Macaca_mulatta
ENSOCUG00000027889	-	100	93.299	ENSMNEG00000030594	-	99	93.636	Macaca_nemestrina
ENSOCUG00000027889	-	100	93.299	ENSMLEG00000039934	LSM12	99	93.636	Mandrillus_leucophaeus
ENSOCUG00000027889	-	100	79.487	ENSMAMG00000004279	lsm12b	99	79.487	Mastacembelus_armatus
ENSOCUG00000027889	-	100	79.487	ENSMZEG00005005754	lsm12b	99	79.487	Maylandia_zebra
ENSOCUG00000027889	-	100	92.784	ENSMICG00000037219	LSM12	99	92.784	Microcebus_murinus
ENSOCUG00000027889	-	100	79.381	ENSMOCG00000017015	-	85	79.381	Microtus_ochrogaster
ENSOCUG00000027889	-	100	93.299	ENSMOCG00000019878	-	99	93.636	Microtus_ochrogaster
ENSOCUG00000027889	-	100	79.487	ENSMMOG00000020848	lsm12b	99	79.487	Mola_mola
ENSOCUG00000027889	-	100	79.487	ENSMALG00000007578	lsm12b	99	79.487	Monopterus_albus
ENSOCUG00000027889	-	100	93.299	MGP_CAROLIEiJ_G0017241	Lsm12	99	93.636	Mus_caroli
ENSOCUG00000027889	-	100	93.299	ENSMUSG00000020922	Lsm12	99	93.636	Mus_musculus
ENSOCUG00000027889	-	100	85.782	MGP_PahariEiJ_G0018371	Lsm12	99	93.636	Mus_pahari
ENSOCUG00000027889	-	100	92.784	MGP_SPRETEiJ_G0018084	Lsm12	99	95.327	Mus_spretus
ENSOCUG00000027889	-	100	92.784	ENSMLUG00000006391	LSM12	99	92.784	Myotis_lucifugus
ENSOCUG00000027889	-	100	65.174	ENSNGAG00000015429	-	99	65.174	Nannospalax_galili
ENSOCUG00000027889	-	100	93.299	ENSNGAG00000001870	Lsm12	99	93.636	Nannospalax_galili
ENSOCUG00000027889	-	100	79.487	ENSNBRG00000006266	lsm12b	99	79.487	Neolamprologus_brichardi
ENSOCUG00000027889	-	100	93.299	ENSNLEG00000005580	-	99	93.636	Nomascus_leucogenys
ENSOCUG00000027889	-	85	91.515	ENSMEUG00000007501	-	100	91.515	Notamacropus_eugenii
ENSOCUG00000027889	-	100	93.299	ENSOPRG00000008552	LSM12	99	93.299	Ochotona_princeps
ENSOCUG00000027889	-	99	83.938	ENSODEG00000007886	-	73	83.938	Octodon_degus
ENSOCUG00000027889	-	100	91.753	ENSODEG00000017998	-	99	91.818	Octodon_degus
ENSOCUG00000027889	-	100	79.487	ENSONIG00000007933	lsm12b	99	79.487	Oreochromis_niloticus
ENSOCUG00000027889	-	100	79.487	ENSORLG00000011310	lsm12b	99	79.487	Oryzias_latipes
ENSOCUG00000027889	-	100	79.487	ENSORLG00020002060	lsm12b	92	79.487	Oryzias_latipes_hni
ENSOCUG00000027889	-	100	79.487	ENSORLG00015001647	lsm12b	92	79.487	Oryzias_latipes_hsok
ENSOCUG00000027889	-	100	79.487	ENSOMEG00000006184	lsm12b	91	79.487	Oryzias_melastigma
ENSOCUG00000027889	-	100	92.784	ENSOGAG00000010489	LSM12	99	92.784	Otolemur_garnettii
ENSOCUG00000027889	-	100	90.000	ENSOARG00000006589	LSM12	99	90.000	Ovis_aries
ENSOCUG00000027889	-	100	83.505	ENSPPAG00000034974	-	99	83.505	Pan_paniscus
ENSOCUG00000027889	-	100	93.299	ENSPPRG00000023420	LSM12	99	93.299	Panthera_pardus
ENSOCUG00000027889	-	73	91.818	ENSPTIG00000014850	-	99	91.818	Panthera_tigris_altaica
ENSOCUG00000027889	-	78	94.737	ENSPTIG00000012704	-	81	94.737	Panthera_tigris_altaica
ENSOCUG00000027889	-	100	93.299	ENSPTRG00000009261	LSM12	99	93.636	Pan_troglodytes
ENSOCUG00000027889	-	100	93.299	ENSPANG00000021315	-	99	93.636	Papio_anubis
ENSOCUG00000027889	-	100	81.538	ENSPKIG00000021058	lsm12b	99	81.538	Paramormyrops_kingsleyae
ENSOCUG00000027889	-	97	72.487	ENSPKIG00000017932	-	96	72.487	Paramormyrops_kingsleyae
ENSOCUG00000027889	-	100	78.974	ENSPMGG00000021344	lsm12b	99	78.974	Periophthalmus_magnuspinnatus
ENSOCUG00000027889	-	100	93.299	ENSPEMG00000012199	Lsm12	99	93.636	Peromyscus_maniculatus_bairdii
ENSOCUG00000027889	-	90	64.368	ENSPMAG00000005461	lsm12a	99	64.368	Petromyzon_marinus
ENSOCUG00000027889	-	100	90.206	ENSPCIG00000020244	LSM12	99	90.206	Phascolarctos_cinereus
ENSOCUG00000027889	-	100	77.436	ENSPFOG00000015930	lsm12b	99	77.436	Poecilia_formosa
ENSOCUG00000027889	-	100	77.436	ENSPLAG00000021089	lsm12b	99	77.436	Poecilia_latipinna
ENSOCUG00000027889	-	100	77.436	ENSPMEG00000012961	lsm12b	99	77.436	Poecilia_mexicana
ENSOCUG00000027889	-	88	80.588	ENSPREG00000010236	lsm12b	94	80.588	Poecilia_reticulata
ENSOCUG00000027889	-	100	93.299	ENSPPYG00000008344	LSM12	99	93.299	Pongo_abelii
ENSOCUG00000027889	-	82	93.082	ENSPCAG00000008790	LSM12	100	93.082	Procavia_capensis
ENSOCUG00000027889	-	100	93.299	ENSPCOG00000027951	LSM12	99	93.636	Propithecus_coquereli
ENSOCUG00000027889	-	100	92.784	ENSPVAG00000013706	LSM12	99	92.784	Pteropus_vampyrus
ENSOCUG00000027889	-	100	79.487	ENSPNYG00000003386	lsm12b	99	79.487	Pundamilia_nyererei
ENSOCUG00000027889	-	100	73.846	ENSPNAG00000018435	lsm12a	99	73.846	Pygocentrus_nattereri
ENSOCUG00000027889	-	100	77.949	ENSPNAG00000004186	lsm12b	99	77.949	Pygocentrus_nattereri
ENSOCUG00000027889	-	100	93.299	ENSRNOG00000020894	Lsm12	99	93.299	Rattus_norvegicus
ENSOCUG00000027889	-	100	93.299	ENSRBIG00000027910	LSM12	99	93.636	Rhinopithecus_bieti
ENSOCUG00000027889	-	100	56.701	ENSRROG00000000537	-	99	56.701	Rhinopithecus_roxellana
ENSOCUG00000027889	-	100	93.299	ENSRROG00000045530	-	99	93.636	Rhinopithecus_roxellana
ENSOCUG00000027889	-	100	93.299	ENSSBOG00000025310	LSM12	99	93.636	Saimiri_boliviensis_boliviensis
ENSOCUG00000027889	-	81	89.172	ENSSHAG00000014914	LSM12	99	89.172	Sarcophilus_harrisii
ENSOCUG00000027889	-	100	82.051	ENSSFOG00015009612	lsm12	99	82.051	Scleropages_formosus
ENSOCUG00000027889	-	100	78.462	ENSSFOG00015020392	lsm12a	99	78.462	Scleropages_formosus
ENSOCUG00000027889	-	100	79.487	ENSSMAG00000008089	lsm12b	99	79.487	Scophthalmus_maximus
ENSOCUG00000027889	-	100	80.513	ENSSDUG00000012711	lsm12b	99	80.513	Seriola_dumerili
ENSOCUG00000027889	-	100	80.513	ENSSLDG00000007404	lsm12b	99	80.513	Seriola_lalandi_dorsalis
ENSOCUG00000027889	-	78	94.079	ENSSARG00000005537	LSM12	99	94.079	Sorex_araneus
ENSOCUG00000027889	-	100	88.660	ENSSPUG00000011984	LSM12	99	88.660	Sphenodon_punctatus
ENSOCUG00000027889	-	100	80.000	ENSSPAG00000017058	lsm12b	99	80.000	Stegastes_partitus
ENSOCUG00000027889	-	100	93.299	ENSSSCG00000032394	LSM12	99	93.299	Sus_scrofa
ENSOCUG00000027889	-	100	79.487	ENSTRUG00000007121	lsm12b	99	79.487	Takifugu_rubripes
ENSOCUG00000027889	-	100	78.974	ENSTNIG00000014436	lsm12b	99	78.974	Tetraodon_nigroviridis
ENSOCUG00000027889	-	100	89.691	ENSTBEG00000012392	-	99	89.691	Tupaia_belangeri
ENSOCUG00000027889	-	100	92.784	ENSTBEG00000012523	-	99	92.784	Tupaia_belangeri
ENSOCUG00000027889	-	100	93.299	ENSTTRG00000010433	LSM12	99	93.299	Tursiops_truncatus
ENSOCUG00000027889	-	100	93.299	ENSUAMG00000006313	LSM12	99	93.299	Ursus_americanus
ENSOCUG00000027889	-	81	91.720	ENSUMAG00000012987	LSM12	89	91.720	Ursus_maritimus
ENSOCUG00000027889	-	100	87.629	ENSVPAG00000011145	LSM12	99	87.629	Vicugna_pacos
ENSOCUG00000027889	-	100	93.299	ENSVVUG00000017581	LSM12	99	93.299	Vulpes_vulpes
ENSOCUG00000027889	-	82	63.522	ENSXETG00000003371	lsm12	77	63.522	Xenopus_tropicalis
ENSOCUG00000027889	-	100	78.462	ENSXCOG00000003994	lsm12b	99	78.462	Xiphophorus_couchianus
ENSOCUG00000027889	-	100	78.462	ENSXMAG00000020950	lsm12b	99	78.462	Xiphophorus_maculatus