EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000028124 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1 pseudogene
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 1605 bases
Position: chr4:55698722-55700326
Accession: 100347480
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000026116	RRM_1	PF00076.22	2.6e-35	1	2
ENSOCUP00000026116	RRM_1	PF00076.22	2.6e-35	2	2
ENSOCUP00000026116	HnRNPA1	PF11627.8	5.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000033044	-	1512	XM_002711349	ENSOCUP00000026116	364 (aa)	-	G1U9J5

Gene Model

Click here to download ENSOCUG00000028124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000028124's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000028124	-	93	97.647	ENSOCUG00000022668	-	100	97.647
ENSOCUG00000028124	-	93	87.607	ENSOCUG00000021006	-	79	96.392
ENSOCUG00000028124	-	93	97.436	ENSOCUG00000021007	-	85	97.423
ENSOCUG00000028124	-	71	81.467	ENSOCUG00000023322	-	69	98.969
ENSOCUG00000028124	-	65	38.075	ENSOCUG00000010440	MSI2	57	40.314
ENSOCUG00000028124	-	66	63.636	ENSOCUG00000014210	-	79	71.053
ENSOCUG00000028124	-	58	72.330	ENSOCUG00000026859	HNRNPA2B1	52	77.297
ENSOCUG00000028124	-	97	76.271	ENSOCUG00000010985	-	60	97.987
ENSOCUG00000028124	-	88	75.155	ENSOCUG00000022627	-	66	94.845
ENSOCUG00000028124	-	50	42.941	ENSOCUG00000001357	HNRNPD	61	42.690
ENSOCUG00000028124	-	93	88.889	ENSOCUG00000022568	-	80	98.454
ENSOCUG00000028124	-	93	97.487	ENSOCUG00000023674	-	85	98.969
ENSOCUG00000028124	-	97	76.610	ENSOCUG00000023444	-	60	98.658
ENSOCUG00000028124	-	53	42.105	ENSOCUG00000002271	RBM3	54	40.230
ENSOCUG00000028124	-	63	53.097	ENSOCUG00000005703	-	75	59.551
ENSOCUG00000028124	-	66	70.954	ENSOCUG00000023949	-	65	76.804
ENSOCUG00000028124	-	66	63.934	ENSOCUG00000006431	-	78	75.916
ENSOCUG00000028124	-	55	40.116	ENSOCUG00000026424	HNRNPAB	64	39.773

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000028124	-	97	70.468	ENSCAFG00000006327	-	60	89.691	Canis_familiaris
ENSOCUG00000028124	-	93	78.302	ENSDNOG00000030945	-	65	78.689	Dasypus_novemcinctus
ENSOCUG00000028124	-	52	98.942	ENSDORG00000027821	-	61	97.938	Dipodomys_ordii
ENSOCUG00000028124	-	73	72.500	ENSETEG00000010244	-	87	72.500	Echinops_telfairi
ENSOCUG00000028124	-	58	63.333	ENSETEG00000004129	-	71	65.464	Echinops_telfairi
ENSOCUG00000028124	-	52	98.942	ENSFDAG00000021342	-	61	97.938	Fukomys_damarensis
ENSOCUG00000028124	-	52	98.942	ENSHGLG00000003139	HNRNPA1	61	97.938	Heterocephalus_glaber_female
ENSOCUG00000028124	-	52	98.942	ENSHGLG00100015974	HNRNPA1	61	97.938	Heterocephalus_glaber_male
ENSOCUG00000028124	-	88	64.952	ENSHGLG00100017719	-	62	76.020	Heterocephalus_glaber_male
ENSOCUG00000028124	-	93	64.246	ENSMNEG00000038539	-	51	69.072	Macaca_nemestrina
ENSOCUG00000028124	-	51	83.333	ENSMPUG00000016249	-	59	83.333	Mustela_putorius_furo
ENSOCUG00000028124	-	92	71.758	ENSMPUG00000003127	-	56	82.632	Mustela_putorius_furo
ENSOCUG00000028124	-	68	66.667	ENSMPUG00000008269	-	70	77.540	Mustela_putorius_furo
ENSOCUG00000028124	-	83	57.658	ENSNLEG00000032512	-	62	50.403	Nomascus_leucogenys
ENSOCUG00000028124	-	83	56.106	ENSPTIG00000013949	-	58	67.568	Panthera_tigris_altaica
ENSOCUG00000028124	-	56	87.255	ENSSFOG00015007588	-	74	87.129	Scleropages_formosus