EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000028215 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Minus strand
Length: 4503 bases
Position: chr12:89717405-89721907
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000019004	LSM	PF01423.22	5.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000031928	-	4357	-	ENSOCUP00000019004	240 (aa)	-	G1TPR7

Gene Model

Click here to download ENSOCUG00000028215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000028215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000028215	-	88	72.038	ENSOCUG00000026813	-	63	70.270
ENSOCUG00000028215	-	75	91.620	ENSOCUG00000022423	-	86	94.643
ENSOCUG00000028215	-	89	89.720	ENSOCUG00000003532	-	70	94.048
ENSOCUG00000028215	-	90	93.953	ENSOCUG00000021456	-	88	93.897
ENSOCUG00000028215	-	100	97.500	ENSOCUG00000014042	-	100	97.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000028215	-	100	97.083	ENSG00000125835	SNRPB	100	97.083	Homo_sapiens
ENSOCUG00000028215	-	75	90.608	ENSAPOG00000019606	snrpb	56	92.262	Acanthochromis_polyacanthus
ENSOCUG00000028215	-	99	97.071	ENSAMEG00000011353	SNRPB	98	97.071	Ailuropoda_melanoleuca
ENSOCUG00000028215	-	73	90.286	ENSACIG00000014480	snrpb	71	91.975	Amphilophus_citrinellus
ENSOCUG00000028215	-	75	90.608	ENSAOCG00000006876	snrpb	69	92.262	Amphiprion_ocellaris
ENSOCUG00000028215	-	75	90.608	ENSAPEG00000021585	snrpb	71	92.262	Amphiprion_percula
ENSOCUG00000028215	-	75	90.055	ENSATEG00000009836	snrpb	69	91.667	Anabas_testudineus
ENSOCUG00000028215	-	89	90.187	ENSANAG00000020364	-	54	88.679	Aotus_nancymaae
ENSOCUG00000028215	-	100	97.083	ENSANAG00000024443	-	100	97.083	Aotus_nancymaae
ENSOCUG00000028215	-	96	90.909	ENSANAG00000036271	-	86	92.019	Aotus_nancymaae
ENSOCUG00000028215	-	75	90.608	ENSACLG00000014707	snrpb	69	92.262	Astatotilapia_calliptera
ENSOCUG00000028215	-	76	91.257	ENSAMXG00000029434	snrpb	89	92.019	Astyanax_mexicanus
ENSOCUG00000028215	-	95	97.380	ENSBTAG00000001038	SNRPB	99	97.380	Bos_taurus
ENSOCUG00000028215	-	95	96.943	ENSCJAG00000020971	-	99	96.943	Callithrix_jacchus
ENSOCUG00000028215	-	89	89.720	ENSCJAG00000023097	-	89	89.671	Callithrix_jacchus
ENSOCUG00000028215	-	95	96.943	ENSCAFG00000006693	-	99	96.943	Canis_familiaris
ENSOCUG00000028215	-	78	87.368	ENSCAFG00000031109	-	79	83.684	Canis_familiaris
ENSOCUG00000028215	-	100	97.083	ENSCAFG00020016981	-	100	97.083	Canis_lupus_dingo
ENSOCUG00000028215	-	95	97.380	ENSCHIG00000025449	-	99	97.380	Capra_hircus
ENSOCUG00000028215	-	97	73.276	ENSTSYG00000032303	-	78	73.709	Carlito_syrichta
ENSOCUG00000028215	-	95	96.943	ENSTSYG00000014498	-	99	96.943	Carlito_syrichta
ENSOCUG00000028215	-	99	97.071	ENSCAPG00000012669	SNRPB	99	97.071	Cavia_aperea
ENSOCUG00000028215	-	95	96.943	ENSCPOG00000039408	SNRPB	99	96.943	Cavia_porcellus
ENSOCUG00000028215	-	53	86.614	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSOCUG00000028215	-	100	97.083	ENSCCAG00000026002	SNRPB	100	97.083	Cebus_capucinus
ENSOCUG00000028215	-	95	96.943	ENSCATG00000030230	SNRPB	99	96.943	Cercocebus_atys
ENSOCUG00000028215	-	100	95.833	ENSCLAG00000012442	SNRPB	100	95.833	Chinchilla_lanigera
ENSOCUG00000028215	-	95	96.943	ENSCSAG00000010840	SNRPB	99	96.943	Chlorocebus_sabaeus
ENSOCUG00000028215	-	79	94.180	ENSCPBG00000026801	SNRPB	95	93.392	Chrysemys_picta_bellii
ENSOCUG00000028215	-	100	97.083	ENSCANG00000019461	SNRPB	100	97.083	Colobus_angolensis_palliatus
ENSOCUG00000028215	-	95	96.943	ENSCGRG00001023046	Snrpb	99	96.943	Cricetulus_griseus_chok1gshd
ENSOCUG00000028215	-	92	96.833	ENSCGRG00000010423	Snrpb	98	96.833	Cricetulus_griseus_crigri
ENSOCUG00000028215	-	76	90.164	ENSCSEG00000020328	snrpb	88	90.141	Cynoglossus_semilaevis
ENSOCUG00000028215	-	70	91.071	ENSDARG00000011125	snrpb	88	92.019	Danio_rerio
ENSOCUG00000028215	-	100	97.083	ENSDNOG00000015545	-	100	97.083	Dasypus_novemcinctus
ENSOCUG00000028215	-	95	92.511	ENSDNOG00000007896	-	93	92.511	Dasypus_novemcinctus
ENSOCUG00000028215	-	96	97.391	ENSDORG00000029558	Snrpb	100	97.391	Dipodomys_ordii
ENSOCUG00000028215	-	62	68.456	FBgn0262601	SmB	74	68.456	Drosophila_melanogaster
ENSOCUG00000028215	-	76	77.049	ENSETEG00000006830	SNRPB	93	79.812	Echinops_telfairi
ENSOCUG00000028215	-	78	76.344	ENSEBUG00000007467	SNRPB	62	85.906	Eptatretus_burgeri
ENSOCUG00000028215	-	95	96.943	ENSEASG00005012991	SNRPB	99	96.943	Equus_asinus_asinus
ENSOCUG00000028215	-	95	96.943	ENSECAG00000011944	SNRPB	99	96.943	Equus_caballus
ENSOCUG00000028215	-	79	97.354	ENSEEUG00000015568	SNRPB	75	97.183	Erinaceus_europaeus
ENSOCUG00000028215	-	60	93.103	ENSELUG00000014564	snrpb	91	88.889	Esox_lucius
ENSOCUG00000028215	-	95	96.943	ENSFCAG00000034090	-	99	96.943	Felis_catus
ENSOCUG00000028215	-	91	92.694	ENSFALG00000004866	SNRPB	94	92.694	Ficedula_albicollis
ENSOCUG00000028215	-	99	97.071	ENSFDAG00000009937	SNRPB	99	96.943	Fukomys_damarensis
ENSOCUG00000028215	-	95	92.952	ENSGALG00000035421	SNRPN	95	92.952	Gallus_gallus
ENSOCUG00000028215	-	71	90.643	ENSGAFG00000019558	snrpb	72	91.617	Gambusia_affinis
ENSOCUG00000028215	-	76	89.071	ENSGACG00000003262	snrpb	88	89.202	Gasterosteus_aculeatus
ENSOCUG00000028215	-	95	96.943	ENSGGOG00000016138	SNRPB	99	96.943	Gorilla_gorilla
ENSOCUG00000028215	-	75	90.608	ENSHBUG00000008369	snrpb	69	92.262	Haplochromis_burtoni
ENSOCUG00000028215	-	63	87.333	ENSHGLG00000016505	-	72	87.333	Heterocephalus_glaber_female
ENSOCUG00000028215	-	95	96.943	ENSHGLG00000016241	-	99	96.943	Heterocephalus_glaber_female
ENSOCUG00000028215	-	100	97.083	ENSHGLG00100012877	-	100	97.083	Heterocephalus_glaber_male
ENSOCUG00000028215	-	63	87.333	ENSHGLG00100004178	-	72	87.333	Heterocephalus_glaber_male
ENSOCUG00000028215	-	76	90.164	ENSHCOG00000014888	snrpb	88	90.141	Hippocampus_comes
ENSOCUG00000028215	-	70	91.071	ENSIPUG00000024569	SNRPB	89	92.019	Ictalurus_punctatus
ENSOCUG00000028215	-	95	95.595	ENSSTOG00000033664	-	95	95.595	Ictidomys_tridecemlineatus
ENSOCUG00000028215	-	93	78.475	ENSSTOG00000027821	-	62	96.324	Ictidomys_tridecemlineatus
ENSOCUG00000028215	-	95	96.943	ENSJJAG00000024170	Snrpb	99	96.943	Jaculus_jaculus
ENSOCUG00000028215	-	72	91.860	ENSKMAG00000014494	snrpb	68	92.857	Kryptolebias_marmoratus
ENSOCUG00000028215	-	76	90.164	ENSLBEG00000005678	snrpb	88	90.141	Labrus_bergylta
ENSOCUG00000028215	-	95	90.308	ENSLACG00000011459	SNRPB	95	90.308	Latimeria_chalumnae
ENSOCUG00000028215	-	70	91.667	ENSLOCG00000002687	snrpb	89	92.488	Lepisosteus_oculatus
ENSOCUG00000028215	-	95	93.860	ENSLAFG00000017588	SNRPB	99	93.860	Loxodonta_africana
ENSOCUG00000028215	-	95	96.943	ENSMFAG00000038756	SNRPB	99	96.943	Macaca_fascicularis
ENSOCUG00000028215	-	95	96.943	ENSMMUG00000010050	SNRPB	99	96.943	Macaca_mulatta
ENSOCUG00000028215	-	95	96.943	ENSMNEG00000027954	SNRPB	99	96.943	Macaca_nemestrina
ENSOCUG00000028215	-	100	97.083	ENSMLEG00000022346	SNRPB	100	97.083	Mandrillus_leucophaeus
ENSOCUG00000028215	-	75	90.556	ENSMAMG00000009294	snrpb	67	92.216	Mastacembelus_armatus
ENSOCUG00000028215	-	75	90.608	ENSMZEG00005011856	snrpb	69	92.262	Maylandia_zebra
ENSOCUG00000028215	-	95	97.380	ENSMICG00000016519	SNRPB	99	97.380	Microcebus_murinus
ENSOCUG00000028215	-	99	81.513	ENSMICG00000015983	-	95	88.889	Microcebus_murinus
ENSOCUG00000028215	-	95	96.507	ENSMOCG00000002892	-	99	96.507	Microtus_ochrogaster
ENSOCUG00000028215	-	82	78.571	ENSMOCG00000021362	-	91	74.648	Microtus_ochrogaster
ENSOCUG00000028215	-	76	90.659	ENSMMOG00000013226	snrpb	90	90.094	Mola_mola
ENSOCUG00000028215	-	75	90.055	ENSMALG00000020839	snrpb	56	91.667	Monopterus_albus
ENSOCUG00000028215	-	95	96.507	MGP_CAROLIEiJ_G0024293	Snrpb	99	96.507	Mus_caroli
ENSOCUG00000028215	-	95	96.507	ENSMUSG00000027404	Snrpb	99	96.507	Mus_musculus
ENSOCUG00000028215	-	95	96.507	MGP_PahariEiJ_G0025738	Snrpb	99	96.507	Mus_pahari
ENSOCUG00000028215	-	95	96.507	MGP_SPRETEiJ_G0025213	Snrpb	99	96.507	Mus_spretus
ENSOCUG00000028215	-	95	96.943	ENSMPUG00000009283	SNRPB	99	96.943	Mustela_putorius_furo
ENSOCUG00000028215	-	100	94.583	ENSMLUG00000016951	SNRPB	100	94.583	Myotis_lucifugus
ENSOCUG00000028215	-	95	96.943	ENSNGAG00000012051	Snrpb	99	96.943	Nannospalax_galili
ENSOCUG00000028215	-	75	87.845	ENSNBRG00000006353	snrpb	62	90.854	Neolamprologus_brichardi
ENSOCUG00000028215	-	100	97.083	ENSNLEG00000029067	SNRPB	100	97.083	Nomascus_leucogenys
ENSOCUG00000028215	-	81	95.897	ENSMEUG00000015625	SNRPB	94	94.811	Notamacropus_eugenii
ENSOCUG00000028215	-	99	93.305	ENSODEG00000004305	-	99	96.943	Octodon_degus
ENSOCUG00000028215	-	79	92.063	ENSODEG00000016060	-	90	93.897	Octodon_degus
ENSOCUG00000028215	-	75	90.608	ENSONIG00000000248	snrpb	69	92.262	Oreochromis_niloticus
ENSOCUG00000028215	-	75	90.055	ENSORLG00000021862	snrpb	69	92.262	Oryzias_latipes
ENSOCUG00000028215	-	100	97.083	ENSOGAG00000016149	SNRPB	100	97.083	Otolemur_garnettii
ENSOCUG00000028215	-	95	97.380	ENSOARG00000006740	SNRPB	99	97.380	Ovis_aries
ENSOCUG00000028215	-	95	96.943	ENSPPAG00000036314	SNRPB	99	96.943	Pan_paniscus
ENSOCUG00000028215	-	100	97.083	ENSPPRG00000003233	-	100	97.083	Panthera_pardus
ENSOCUG00000028215	-	99	97.071	ENSPTIG00000007468	SNRPB	99	97.071	Panthera_tigris_altaica
ENSOCUG00000028215	-	95	96.943	ENSPTRG00000013176	SNRPB	99	96.943	Pan_troglodytes
ENSOCUG00000028215	-	100	97.083	ENSPANG00000020362	SNRPB	100	97.083	Papio_anubis
ENSOCUG00000028215	-	70	90.476	ENSPKIG00000002865	snrpb	89	91.080	Paramormyrops_kingsleyae
ENSOCUG00000028215	-	74	88.202	ENSPMGG00000016349	snrpb	69	89.571	Periophthalmus_magnuspinnatus
ENSOCUG00000028215	-	95	96.943	ENSPEMG00000007948	Snrpb	99	96.943	Peromyscus_maniculatus_bairdii
ENSOCUG00000028215	-	95	96.943	ENSPPYG00000010841	SNRPB	99	96.943	Pongo_abelii
ENSOCUG00000028215	-	95	96.943	ENSPCOG00000013686	SNRPB	99	96.943	Propithecus_coquereli
ENSOCUG00000028215	-	95	95.595	ENSPVAG00000017013	SNRPB	80	95.595	Pteropus_vampyrus
ENSOCUG00000028215	-	75	90.608	ENSPNYG00000014788	snrpb	69	92.262	Pundamilia_nyererei
ENSOCUG00000028215	-	76	91.257	ENSPNAG00000016126	snrpb	89	92.488	Pygocentrus_nattereri
ENSOCUG00000028215	-	95	96.943	ENSRNOG00000006961	Snrpb	99	96.943	Rattus_norvegicus
ENSOCUG00000028215	-	100	96.667	ENSRBIG00000040505	SNRPB	100	96.667	Rhinopithecus_bieti
ENSOCUG00000028215	-	100	97.083	ENSRROG00000036094	SNRPB	100	97.083	Rhinopithecus_roxellana
ENSOCUG00000028215	-	100	97.083	ENSSBOG00000027310	SNRPB	100	97.083	Saimiri_boliviensis_boliviensis
ENSOCUG00000028215	-	70	89.881	ENSSFOG00015002870	snrpb	89	91.080	Scleropages_formosus
ENSOCUG00000028215	-	76	89.617	ENSSMAG00000006766	snrpb	88	89.671	Scophthalmus_maximus
ENSOCUG00000028215	-	75	90.608	ENSSDUG00000018539	snrpb	69	92.262	Seriola_dumerili
ENSOCUG00000028215	-	75	90.608	ENSSLDG00000022391	snrpb	69	92.262	Seriola_lalandi_dorsalis
ENSOCUG00000028215	-	78	84.574	ENSSARG00000003084	SNRPB	91	85.849	Sorex_araneus
ENSOCUG00000028215	-	75	90.608	ENSSPAG00000021992	snrpb	69	92.262	Stegastes_partitus
ENSOCUG00000028215	-	95	78.603	ENSSSCG00000011966	-	91	72.300	Sus_scrofa
ENSOCUG00000028215	-	95	97.380	ENSSSCG00000040857	-	99	97.380	Sus_scrofa
ENSOCUG00000028215	-	74	77.401	ENSTGUG00000005684	SNRPB	59	93.571	Taeniopygia_guttata
ENSOCUG00000028215	-	76	89.617	ENSTRUG00000023094	snrpb	92	89.671	Takifugu_rubripes
ENSOCUG00000028215	-	76	89.617	ENSTNIG00000002991	snrpb	88	89.671	Tetraodon_nigroviridis
ENSOCUG00000028215	-	75	97.222	ENSUAMG00000005984	-	88	97.268	Ursus_americanus
ENSOCUG00000028215	-	57	96.350	ENSUMAG00000002123	-	63	96.350	Ursus_maritimus
ENSOCUG00000028215	-	100	96.667	ENSVVUG00000025654	-	100	96.667	Vulpes_vulpes
ENSOCUG00000028215	-	100	74.583	ENSVVUG00000010086	-	93	78.873	Vulpes_vulpes
ENSOCUG00000028215	-	79	93.122	ENSXETG00000027266	snrpb	90	92.488	Xenopus_tropicalis