EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOCUG00000029276 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryctolagus_cuniculus
Status: putative
Strand: Plus strand
Length: 6196 bases
Position: chrGL018833:542823-549018
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	1	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	2	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	3	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	4	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	5	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	6	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	7	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	8	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	9	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	10	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	11	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	12	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	13	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	14	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	15	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	16	17
ENSOCUP00000027134	zf-C2H2	PF00096.26	2.8e-109	17	17
ENSOCUP00000027134	zf-met	PF12874.7	5.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOCUT00000034085	-	5553	-	ENSOCUP00000027134	821 (aa)	-	U3KPH4

Gene Model

Click here to download ENSOCUG00000029276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOCUG00000029276's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOCUG00000029276	-	94	47.126	ENSOCUG00000029755	-	98	47.126
ENSOCUG00000029276	-	76	44.030	ENSOCUG00000012254	-	50	44.030
ENSOCUG00000029276	-	81	42.063	ENSOCUG00000005876	-	100	42.063
ENSOCUG00000029276	-	90	55.051	ENSOCUG00000015340	-	98	55.051
ENSOCUG00000029276	-	89	49.687	ENSOCUG00000017842	ZNF235	71	49.687
ENSOCUG00000029276	-	70	40.000	ENSOCUG00000012116	OVOL2	64	40.000
ENSOCUG00000029276	-	91	48.909	ENSOCUG00000027634	-	82	48.909
ENSOCUG00000029276	-	77	34.595	ENSOCUG00000014765	ZBTB41	55	37.281
ENSOCUG00000029276	-	77	40.000	ENSOCUG00000002274	BCL6B	60	42.353
ENSOCUG00000029276	-	94	44.910	ENSOCUG00000029391	ZNF668	84	43.787
ENSOCUG00000029276	-	72	43.925	ENSOCUG00000005422	SNAI1	70	43.925
ENSOCUG00000029276	-	80	37.895	ENSOCUG00000014377	ZNF646	85	47.368
ENSOCUG00000029276	-	75	33.208	ENSOCUG00000011713	GTF3A	66	33.205
ENSOCUG00000029276	-	89	56.986	ENSOCUG00000029445	-	99	56.986
ENSOCUG00000029276	-	91	63.065	ENSOCUG00000029594	-	100	62.313
ENSOCUG00000029276	-	89	48.148	ENSOCUG00000007993	ZBTB49	51	46.465
ENSOCUG00000029276	-	82	40.989	ENSOCUG00000010953	ZNF408	60	40.989
ENSOCUG00000029276	-	85	35.793	ENSOCUG00000013454	PRDM5	77	35.793
ENSOCUG00000029276	-	99	54.959	ENSOCUG00000003561	ZNF2	97	54.959
ENSOCUG00000029276	-	85	51.626	ENSOCUG00000001924	ZFP1	89	50.000
ENSOCUG00000029276	-	99	51.276	ENSOCUG00000007715	-	99	51.276
ENSOCUG00000029276	-	83	42.857	ENSOCUG00000017015	ZFAT	58	42.857
ENSOCUG00000029276	-	74	33.117	ENSOCUG00000029615	ZNF526	84	32.934
ENSOCUG00000029276	-	99	54.505	ENSOCUG00000029223	ZNF699	99	54.505
ENSOCUG00000029276	-	92	44.977	ENSOCUG00000029071	ZNF81	79	44.977
ENSOCUG00000029276	-	84	52.769	ENSOCUG00000029075	ZNF582	76	52.769
ENSOCUG00000029276	-	84	50.510	ENSOCUG00000029133	ZNF768	57	49.754
ENSOCUG00000029276	-	86	42.143	ENSOCUG00000009378	ZNF236	74	42.143
ENSOCUG00000029276	-	74	32.143	ENSOCUG00000003685	ZNF423	96	32.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOCUG00000029276	-	98	63.764	ENSCAPG00000003129	-	94	63.764	Cavia_aperea
ENSOCUG00000029276	-	95	66.093	ENSCPOG00000034004	-	96	66.093	Cavia_porcellus
ENSOCUG00000029276	-	99	66.121	ENSCLAG00000012556	-	94	65.332	Chinchilla_lanigera
ENSOCUG00000029276	-	99	66.012	ENSCGRG00001000576	Zfp26	85	66.012	Cricetulus_griseus_chok1gshd
ENSOCUG00000029276	-	99	66.012	ENSCGRG00000010436	-	85	66.012	Cricetulus_griseus_crigri
ENSOCUG00000029276	-	95	65.045	ENSCGRG00000000280	-	96	65.045	Cricetulus_griseus_crigri
ENSOCUG00000029276	-	99	64.945	ENSDORG00000027564	Zfp26	88	64.945	Dipodomys_ordii
ENSOCUG00000029276	-	99	66.235	ENSFDAG00000009594	-	92	66.235	Fukomys_damarensis
ENSOCUG00000029276	-	99	66.371	ENSHGLG00000005362	-	91	66.371	Heterocephalus_glaber_female
ENSOCUG00000029276	-	99	65.582	ENSHGLG00100007268	-	94	65.582	Heterocephalus_glaber_male
ENSOCUG00000029276	-	99	66.873	ENSSTOG00000023536	-	88	66.873	Ictidomys_tridecemlineatus
ENSOCUG00000029276	-	99	64.417	ENSJJAG00000020082	-	95	64.417	Jaculus_jaculus
ENSOCUG00000029276	-	99	65.153	ENSMAUG00000017074	Zfp26	94	64.330	Mesocricetus_auratus
ENSOCUG00000029276	-	99	65.504	ENSMOCG00000015724	Zfp26	94	65.504	Microtus_ochrogaster
ENSOCUG00000029276	-	99	64.670	ENSMUSG00000063108	Zfp26	85	64.670	Mus_musculus
ENSOCUG00000029276	-	99	65.399	ENSNGAG00000020695	Zfp26	85	65.399	Nannospalax_galili
ENSOCUG00000029276	-	99	64.778	ENSODEG00000016460	-	94	64.778	Octodon_degus
ENSOCUG00000029276	-	99	65.521	ENSPEMG00000016507	Zfp26	85	65.521	Peromyscus_maniculatus_bairdii
ENSOCUG00000029276	-	99	65.116	ENSRNOG00000025937	Zfp26	99	65.116	Rattus_norvegicus